Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B24
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0789 + 21211110-21211296,21211636-21211937,21212034-21212702     30   2.1  
08_02_1195 - 25149891-25151402,25152194-25152493                       30   2.7  
04_04_0161 + 23203786-23203848,23204141-23204180,23204865-232050...    30   2.7  
01_07_0369 - 43111835-43111882,43112172-43112245,43112670-431127...    30   2.7  
03_05_1119 + 30535547-30535594,30535787-30535846,30535948-305359...    29   4.8  
04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876...    29   6.3  

>08_02_0789 + 21211110-21211296,21211636-21211937,21212034-21212702
          Length = 385

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = +2

Query: 431 P*DRDYRQSERPSSVWSQMEEAGIWGAPXQRWEQYSTRGRTC 556
           P DR YR S RP+ V +    AG W A       YST G  C
Sbjct: 77  PRDRKYRNSVRPNRVTT----AGFWKATGTDRPIYSTEGTKC 114


>08_02_1195 - 25149891-25151402,25152194-25152493
          Length = 603

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = -2

Query: 449 DNPGLTDRLEPLGLRRDFGSLCILFRMF--HGECSEELFEMIPASRFYHRTARHRSRVHP 276
           DN  L++    +GL  +     + F  F  H   S    E+  +S   HR  R   R HP
Sbjct: 116 DNRSLSENWSGIGLDHEGQEDEVAFSDFDNHNTFSSSNSELHFSSSNEHRRNRMGCRNHP 175

Query: 275 YYLEPLRSSTVRFQRSFSPRT 213
            +L+P   ST  F +S S RT
Sbjct: 176 SFLQP-ALSTDSFIKSASKRT 195


>04_04_0161 +
           23203786-23203848,23204141-23204180,23204865-23205016,
           23205270-23205406,23206356-23206396,23206500-23207098,
           23207599-23207679,23208146-23208208,23209141-23209197
          Length = 410

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +1

Query: 328 GIISNNSSEHSPWNIRNKIQREPKSLRR 411
           G+ SN  +E +  ++R K+ R+PK++RR
Sbjct: 161 GLSSNGGAEQNGVDLREKLSRKPKNIRR 188


>01_07_0369 -
           43111835-43111882,43112172-43112245,43112670-43112754,
           43112930-43113022,43113099-43113163,43114051-43114142,
           43114240-43114527,43114642-43114706,43115421-43115502,
           43115578-43115669,43116169-43116301,43116380-43116501,
           43116624-43116725,43116853-43116892,43117032-43117103,
           43117241-43117320,43117444-43117818
          Length = 635

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
 Frame = -2

Query: 620 CWSPQQSEAYFTPDXXFCFIKHKSGLAWSTAPISGPGLPKYQLLPFDSIQRRAVRIVDNP 441
           CW  Q  E Y      F  +  K+   W   P S        +L    +Q +A++ V  P
Sbjct: 518 CWITQDFELYAA----FNPLADKAPGEWIKVPYSWL-YSNSIILSILILQSQAIKAV--P 570

Query: 440 GLTDRLEPLGLRRDFGSLCILF--RMFHGECS 351
            L  R E LGL   F  + ILF  ++F+G C+
Sbjct: 571 SLLGRYEGLGLYNIFTKVMILFATQVFYGYCA 602


>03_05_1119 +
           30535547-30535594,30535787-30535846,30535948-30535987,
           30536575-30536753,30537411-30537449,30537525-30537611,
           30537732-30537792,30538253-30538377,30538471-30538562,
           30538652-30538769
          Length = 282

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 533 TAPISGPGLPKYQLLPFDSI-QRRAVRIVDNPGLTD 429
           TA ++GPG+   Q LPF  + QR A R V  P L D
Sbjct: 219 TASLTGPGVVFIQSLPFHRLSQRIASRSVAAPSLRD 254


>04_04_0419 +
           25086456-25086768,25087302-25087369,25087458-25087681,
           25087929-25088012,25088593-25088806,25089252-25089428,
           25089526-25089645,25089865-25089991,25090104-25090130,
           25090526-25091007
          Length = 611

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 511 GSPNTSFFHLTPYRGGPFGLSIIPVSRIVWNLWVCGG 401
           GSP+TS +HLT  R  P GL     +   WN W+  G
Sbjct: 546 GSPSTSLYHLTACR-LPAGLFCYKANG--WNAWLVTG 579


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,982,818
Number of Sequences: 37544
Number of extensions: 634316
Number of successful extensions: 1762
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)