Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B24
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.90 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   1.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   3.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   8.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.4  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = +3

Query: 390 GTEVPPQTQRFQTIRETGIIDNPNGPPLYGVKWKK 494
           G E+ P TQ     R      N  G P+  V W K
Sbjct: 309 GAEIEPSTQTIDFGRPATFTCNVRGNPIKTVSWLK 343


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 731 IPRRIPATFREYWXXGVDIRAMSRFGVIGRQS 636
           IPRRIP    E +  G  +R +     IGR++
Sbjct: 788 IPRRIPMDATEVYLDGNVLRELQNHVFIGRKN 819


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 485 FDSIQRRAVRIVDNPGLTDRLEPLGL 408
           +DSI+ R   I D   +T+   PLGL
Sbjct: 167 YDSIEARDSAIFDGDFITENNLPLGL 192


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 46  PPDGEWLPSPMDFSNARG 99
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -3

Query: 550  PASRGVLLPSLXRGSPNTSFFHLTPYRGGPF 458
            P   G+ +PS   G P+  F     +   PF
Sbjct: 1139 PGPNGIKMPSFMEGMPHLPFTPFNFWNPPPF 1169


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -2

Query: 284 VHPYYLEPLRSSTVRFQRSFSPRTIRLWNELPSTV 180
           VH +YL PL +   +   S S   +  W +  +++
Sbjct: 215 VHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 249


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -2

Query: 284 VHPYYLEPLRSSTVRFQRSFSPRTIRLWNELPSTV 180
           VH +YL PL +   +   S S   +  W +  +++
Sbjct: 86  VHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 120


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 369 HTEQNTEGTEVPPQTQRFQTIRETGIIDNPN 461
           H E NT+G  +   TQR Q  ++  ++  P+
Sbjct: 164 HPELNTQGIALADLTQRAQIGQKHKLLIGPS 194


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -2

Query: 284 VHPYYLEPLRSSTVRFQRSFSPRTIRLWNELPSTV 180
           VH +YL PL +   +   S S   +  W +  +++
Sbjct: 215 VHYHYLSPLSAGLFQGGISISGTALNCWTQTENSL 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,329
Number of Sequences: 438
Number of extensions: 6316
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)