Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B23
         (872 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3UPT2 Cluster: 0 day neonate eyeball cDNA, RIKEN full-...    35   3.1  
UniRef50_Q5WIH2 Cluster: Putative uncharacterized protein; n=1; ...    35   3.1  
UniRef50_A5P245 Cluster: AzlC family protein precursor; n=1; Met...    34   5.4  
UniRef50_Q0UI45 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q3UPT2 Cluster: 0 day neonate eyeball cDNA, RIKEN
           full-length enriched library, clone:E130311F08
           product:hypothetical Arginine-rich region profile
           containing protein, full insert sequence; n=1; Mus
           musculus|Rep: 0 day neonate eyeball cDNA, RIKEN
           full-length enriched library, clone:E130311F08
           product:hypothetical Arginine-rich region profile
           containing protein, full insert sequence - Mus musculus
           (Mouse)
          Length = 187

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
 Frame = +3

Query: 420 SYYINTKSKSIVDLSKGERWKGG-YLI*RRERL---VKGLSCPRSPAPAPRQTLRPRRRW 587
           S  ++  +  I  +  G+R  GG +L  R  R    ++GLS PR P    R+  RPRR+ 
Sbjct: 4   SLLVSRLANEISSILTGKRPCGGRWLYSRHTRAPLGLQGLSGPRPPGRQRRRRRRPRRQQ 63

Query: 588 PPGTVGTRXTRSFMLLSASGELHLXPCPRR 677
           PP  + +   RS   ++   +  L P P R
Sbjct: 64  PP--LRSPNARSAATITQVRDSELHPSPAR 91


>UniRef50_Q5WIH2 Cluster: Putative uncharacterized protein; n=1;
           Bacillus clausii KSM-K16|Rep: Putative uncharacterized
           protein - Bacillus clausii (strain KSM-K16)
          Length = 273

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 279 LFTAINIPELPFVVKEKHRECKHNLLPRHNVYFLGYFIM 395
           LF  + +  LPF+ +  H E KH+  P H V  +G F++
Sbjct: 88  LFAGLVLGILPFLWRSAHAETKHSFKPLHYVLMIGAFVL 126


>UniRef50_A5P245 Cluster: AzlC family protein precursor; n=1;
           Methylobacterium sp. 4-46|Rep: AzlC family protein
           precursor - Methylobacterium sp. 4-46
          Length = 573

 Score = 33.9 bits (74), Expect = 5.4
 Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +3

Query: 501 RRERLVKGLSCPRSPAPAPRQTLRPRRRWPP--GTVGTRXTRSFMLLSA-SGELHLXPCP 671
           RR     G   PR+PAP P +  RPR R P   G  G R      L +A  G L   P  
Sbjct: 70  RRRHDAAGRRAPRAPAPGPARRRRPRHRGPARRGRDGVRGGGGLGLRAARGGRLRRLPAG 129

Query: 672 R 674
           R
Sbjct: 130 R 130


>UniRef50_Q0UI45 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 305

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 633 LSASGELHLXPCPRRVYQCXKSL 701
           +S  GELH+ PC R+VY C + +
Sbjct: 233 ISKGGELHITPCTRKVYLCPRQI 255


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,543,257
Number of Sequences: 1657284
Number of extensions: 10746129
Number of successful extensions: 27014
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26984
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)