Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B23
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical pr...    30   2.5  
X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin pr...    30   2.5  
U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory ...    30   2.5  
Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical pr...    29   4.3  

>Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical
           protein C54C6.2 protein.
          Length = 444

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -2

Query: 700 RLFXHWXTRRGHGXRWSSPEAESNMNDLV 614
           + F HW T  G        EAESNMNDLV
Sbjct: 392 KAFLHWYTGEGMD-EMEFTEAESNMNDLV 419


>Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical
           protein B0272.1 protein.
          Length = 444

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -2

Query: 700 RLFXHWXTRRGHGXRWSSPEAESNMNDLV 614
           + F HW T  G        EAESNMNDLV
Sbjct: 392 KAFLHWYTGEGMD-EMEFTEAESNMNDLV 419


>X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin
           protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -2

Query: 700 RLFXHWXTRRGHGXRWSSPEAESNMNDLV 614
           + F HW T  G        EAESNMNDLV
Sbjct: 392 KAFLHWYTGEGMD-EMEFTEAESNMNDLV 419


>U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory
           abnormality protein7 protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -2

Query: 700 RLFXHWXTRRGHGXRWSSPEAESNMNDLV 614
           + F HW T  G        EAESNMNDLV
Sbjct: 392 KAFLHWYTGEGMD-EMEFTEAESNMNDLV 419


>Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical
           protein K01G5.7 protein.
          Length = 449

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 700 RLFXHWXTRRGHGXRWSSPEAESNMNDLV 614
           + F HW T  G        EAESNMNDL+
Sbjct: 392 KAFLHWYTGEGMD-EMEFTEAESNMNDLI 419


>Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical
           protein C36E8.5 protein.
          Length = 450

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 700 RLFXHWXTRRGHGXRWSSPEAESNMNDLV 614
           + F HW T  G        EAESNMNDL+
Sbjct: 392 KAFLHWYTGEGMD-EMEFTEAESNMNDLI 419


>Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical
           protein F08A10.1c protein.
          Length = 672

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 513 LVKGLSCPRSPAPAPRQTLRPRRRWPPGTVGTRXTRSFMLLSASGELHLXPCPRRV 680
           L+ G S P+S   APR T  P++           T     +S SG  H+   P R+
Sbjct: 14  LLNGSSAPKSILRAPRLTAAPKQLSFDVPASPTPTAKSSCVSTSGSYHMFERPNRL 69


>Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical
           protein F08A10.1b protein.
          Length = 655

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 513 LVKGLSCPRSPAPAPRQTLRPRRRWPPGTVGTRXTRSFMLLSASGELHLXPCPRRV 680
           L+ G S P+S   APR T  P++           T     +S SG  H+   P R+
Sbjct: 14  LLNGSSAPKSILRAPRLTAAPKQLSFDVPASPTPTAKSSCVSTSGSYHMFERPNRL 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,604,736
Number of Sequences: 27780
Number of extensions: 258343
Number of successful extensions: 564
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)