SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B21
         (803 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00005A5107 Cluster: PREDICTED: similar to olfactory ...    35   2.8  
UniRef50_A3LQ04 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_Q9Z8S4 Cluster: Probable aromatic acid decarboxylase; n...    34   4.8  

>UniRef50_UPI00005A5107 Cluster: PREDICTED: similar to olfactory
           receptor Olr784; n=1; Canis lupus familiaris|Rep:
           PREDICTED: similar to olfactory receptor Olr784 - Canis
           familiaris
          Length = 523

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -1

Query: 584 VNPLAHLLGDKKVDDIMQPLKSKYYKPKVISNVENAFTKALEKAN 450
           +NP+ + L +K+V   M+ LKS+Y KP  +  V     +A++ AN
Sbjct: 202 LNPVIYTLRNKEVKTAMRKLKSQYLKPGQVKLVSPLLAEAMDGAN 246


>UniRef50_A3LQ04 Cluster: Putative uncharacterized protein; n=1;
           Pichia stipitis|Rep: Putative uncharacterized protein -
           Pichia stipitis (Yeast)
          Length = 438

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = -1

Query: 596 KLVTVNPLAHLLGDKKVDDIMQPLKSKYYKPKVISNVENAFTKALEKANTPTHF 435
           K   +N +    GD  ++ I   +  K Y+PK++  +++AF    E+    ++F
Sbjct: 194 KNYVINTVLQSFGDSDINTICNKIIRKSYRPKLVEQIQDAFADKYEEIKIDSYF 247


>UniRef50_Q9Z8S4 Cluster: Probable aromatic acid decarboxylase; n=7;
           Chlamydiaceae|Rep: Probable aromatic acid decarboxylase
           - Chlamydia pneumoniae (Chlamydophila pneumoniae)
          Length = 192

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -1

Query: 629 RQDLIKLPDXTKLVTVNPLAHLLG-DKKVDDIMQPLKSKYYKPKVISNVENAFT-KALEK 456
           R+ LI +P  T L T++ L +LL   K    I  P+   Y+KP+ + ++ENA   K L  
Sbjct: 119 RRPLILVPRETPLHTIH-LENLLKLSKSGATIFPPMPMWYFKPQSVEDLENALVGKILAY 177

Query: 455 ANTPTHFRK 429
            N P+   K
Sbjct: 178 LNIPSDLTK 186


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,316,157
Number of Sequences: 1657284
Number of extensions: 11557263
Number of successful extensions: 27427
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27419
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -