Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B21
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.40 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +3

Query: 621 ILTCWLFDWLLRWLRHNIVENVINFDDPVIXASGNRCAMIYYDLRVVWY-DYLMWNMNXV 797
           + T W+   + RW     +  V+ FD   +     + + I+  +R V+   YLM++   V
Sbjct: 451 VATVWINSVINRWKFIEFIRKVLEFDVKCVSNYTKQQSKIHLIVRSVFVTTYLMFDYCTV 510

Query: 798 LR 803
           LR
Sbjct: 511 LR 512


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 645 WLLRWLRHNIVENVINFDDP 704
           W +RWL      NV NF  P
Sbjct: 20  WFVRWLNSQQPRNVPNFAAP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,083
Number of Sequences: 336
Number of extensions: 3173
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)