Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B21
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0471 - 18121023-18121213,18121954-18122080,18122221-181222...    29   5.7  
12_02_0841 + 23579344-23579394,23579522-23579584,23579717-235798...    28   7.6  

>11_04_0471 -
           18121023-18121213,18121954-18122080,18122221-18122253,
           18122969-18123009,18123415-18123484,18123626-18123744,
           18123876-18123942,18124735-18124809,18125023-18125050,
           18125130-18125179,18125679-18125741,18125829-18125870,
           18126000-18126078,18127233-18127368,18128013-18128517,
           18129238-18129372
          Length = 586

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 486 DIRYNLWLVILAFQ-RLHDVIDFLVAQQVSQWIDRH 590
           +I  N WLV    + + H+V D +  +++  WIDRH
Sbjct: 477 NIVQNAWLVYFWRRAKTHNVEDDIAEERLQMWIDRH 512


>12_02_0841 +
           23579344-23579394,23579522-23579584,23579717-23579826,
           23580220-23580320,23580816-23580877,23580972-23581112,
           23581388-23581523,23582257-23582284,23582665-23582728,
           23582924-23583044,23583565-23583623,23583716-23583784,
           23583875-23584015,23584130-23584194,23584345-23584441,
           23584803-23584862,23585409-23585561,23586022-23586088,
           23586174-23586284,23586689-23586799,23587370-23587567,
           23587679-23587860
          Length = 729

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 726 RCAMIYYDLRVVWYDYLMWN 785
           +C M  Y    +WYDY MW+
Sbjct: 252 QCLMYLYHHPDIWYDYAMWH 271


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,564,204
Number of Sequences: 37544
Number of extensions: 296738
Number of successful extensions: 580
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)