Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_B16
(796 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,127... 138 4e-33
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 136 2e-32
07_01_0003 + 16711-17016,17107-17177,17269-17461,17929-17984,185... 31 0.80
01_01_0277 + 2274383-2274465,2274889-2274955,2275040-2275110,227... 29 3.2
01_01_0367 + 2872650-2873045,2873800-2873940,2874255-2874364,287... 29 5.6
07_01_0345 + 2497910-2498114,2498311-2498458,2498551-2498742,249... 28 7.4
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 28 9.8
12_01_0280 + 2027708-2028169,2028287-2028403,2028493-2029746 28 9.8
04_04_0859 + 28805836-28805842,28806405-28806492,28807474-288075... 28 9.8
>07_01_0181 + 1274177-1274200,1274335-1276161,1276519-1277448,
1278314-1278367
Length = 944
Score = 138 bits (335), Expect = 4e-33
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 1/242 (0%)
Frame = -3
Query: 794 ILYNPTXANLGLXAFRRGNVKRSSWLFGRVNDDWKA*RAIGXXXXXXXXX*ALKGAGEN* 615
IL+N A LGL AFR G + + + + + E
Sbjct: 562 ILFNRVMAQLGLCAFRAGLIIEAHGCLSELYSTGRVKELLAQGVQQSRYHEKTPEQ-ERL 620
Query: 614 KTTPDAFSHAH*S-GXLECVYLVSAMLIEIPYMAAHEFDARRRMISKTFYQNLRASERQA 438
+ H H + LE +L+ AMLIE+P MAA +D RR+ +++TF + L SERQ
Sbjct: 621 ERRRQMPYHMHINLELLEATHLICAMLIEVPNMAASTYD-RRKSMNRTFRRLLEISERQT 679
Query: 437 LVGPPESMREHAVAAARAMRRGDWRACLNYIVNEKMNAKVWDLMVGADNVRAMLGCLIRE 258
VGPPE++R+H +AA RA+R+GD++ + ++N + ++W L+ ++V ML I+E
Sbjct: 680 FVGPPENVRDHVMAATRALRKGDYQKAFD-VIN---SLEIWKLLRNKEHVLEMLKLKIKE 735
Query: 257 ESLRTYLFTYAHVYASLSLRSLADMFELPRQRVHSLVSKTRQHYQLQTVSFSIPRTINFT 78
E+LRTYL +Y+ Y SLSL L MF+L Q+ HS+VSK H +L + I F
Sbjct: 736 EALRTYLLSYSSCYESLSLDQLTTMFDLSEQQAHSIVSKMMMHEELHASWDQPTKCIIFH 795
Query: 77 NV 72
NV
Sbjct: 796 NV 797
Score = 81.4 bits (192), Expect = 8e-16
Identities = 34/52 (65%), Positives = 44/52 (84%)
Frame = -1
Query: 730 EAHGCLAELMMTGKPKELLAQGLLPQRQHERSKEQEKIEKQRQMPFHMHINL 575
EAHGCL+EL TG+ KELLAQG+ R HE++ EQE++E++RQMP+HMHINL
Sbjct: 583 EAHGCLSELYSTGRVKELLAQGVQQSRYHEKTPEQERLERRRQMPYHMHINL 634
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 136 bits (329), Expect = 2e-32
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 1/242 (0%)
Frame = -3
Query: 794 ILYNPTXANLGLXAFRRGNVKRSSWLFGRVNDDWKA*RAIGXXXXXXXXX*ALKGAGEN* 615
IL+N A LGL AFR G + + + + + E
Sbjct: 876 ILFNRVMAQLGLCAFRAGLIIEAHGCLSELYSTGRVKELLAQGVQQSRYHEKTPEQ-ERL 934
Query: 614 KTTPDAFSHAH*S-GXLECVYLVSAMLIEIPYMAAHEFDARRRMISKTFYQNLRASERQA 438
+ H H + LE +L+ AMLIE+P MAA +D +R+ +++TF + L SERQ
Sbjct: 935 ERRRQMPYHMHINLELLEATHLICAMLIEVPNMAASTYD-KRKFMNRTFRRLLEISERQT 993
Query: 437 LVGPPESMREHAVAAARAMRRGDWRACLNYIVNEKMNAKVWDLMVGADNVRAMLGCLIRE 258
VGPPE++R+H +AA RA+ +GD + + ++N + ++W L+ ++V ML I+E
Sbjct: 994 FVGPPENVRDHVMAATRALSKGDHQKAFD-VIN---SLEIWKLLRNKEHVLEMLKLKIKE 1049
Query: 257 ESLRTYLFTYAHVYASLSLRSLADMFELPRQRVHSLVSKTRQHYQLQTVSFSIPRTINFT 78
E+LRTYLF+Y+ Y SLSL L MF+L Q+ HS+VSK H +L + I F
Sbjct: 1050 EALRTYLFSYSSCYQSLSLDQLTTMFDLSEQQAHSIVSKMMMHEELHASWDQPTKCIIFH 1109
Query: 77 NV 72
NV
Sbjct: 1110 NV 1111
Score = 81.4 bits (192), Expect = 8e-16
Identities = 34/52 (65%), Positives = 44/52 (84%)
Frame = -1
Query: 730 EAHGCLAELMMTGKPKELLAQGLLPQRQHERSKEQEKIEKQRQMPFHMHINL 575
EAHGCL+EL TG+ KELLAQG+ R HE++ EQE++E++RQMP+HMHINL
Sbjct: 897 EAHGCLSELYSTGRVKELLAQGVQQSRYHEKTPEQERLERRRQMPYHMHINL 948
>07_01_0003 +
16711-17016,17107-17177,17269-17461,17929-17984,
18511-18588,18873-18929,19396-19903
Length = 422
Score = 31.5 bits (68), Expect = 0.80
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 422 ESMREHAVAAARA-MRRGDWRACLNYIVNEKMNAKVW 315
E +RE AAR M + DWRA I NE+ +A +W
Sbjct: 353 EELRETMRKAARKEMEKFDWRAATRKIRNEQYSAAIW 389
>01_01_0277 +
2274383-2274465,2274889-2274955,2275040-2275110,
2275550-2275667,2275755-2275828,2276094-2276149,
2276237-2276320,2276422-2276509,2276602-2276679,
2276814-2276870,2277074-2277578
Length = 426
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 422 ESMREHAVAAARA-MRRGDWRACLNYIVNEKMNAKVW 315
+ R++ ARA M + DWRA I NE NA +W
Sbjct: 358 KEFRDNMGMTARAEMEKCDWRAASKKIRNEFYNAAIW 394
>01_01_0367 +
2872650-2873045,2873800-2873940,2874255-2874364,
2875279-2875390,2875959-2876030,2876605-2876696,
2877116-2877236,2877712-2877834,2877935-2878130,
2878221-2878408,2878553-2878624,2879336-2879434,
2880027-2880107,2880337-2880405,2880730-2880787,
2881181-2881347
Length = 698
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 296 QLRPLNPKPWHSFFHSRCNLGKLSNHLCAWPLQPPLRALASTQEGRQAPD 445
+L+PLNP P S L S+ A PLR LA+T P+
Sbjct: 16 RLKPLNPSPTASHLRRLLLLSTASSTSSASCSPSPLRTLAATDAATPPPE 65
>07_01_0345 +
2497910-2498114,2498311-2498458,2498551-2498742,
2498918-2499046,2499304-2499473,2499659-2499789,
2500007-2500090
Length = 352
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +1
Query: 373 PLRMALAAATACSRIDSGGPTSA*RSLARRF**KVLLIMRRRASNSCAAMYGIS 534
PL + A CS +S G A R R + LL RRR SN CA ++
Sbjct: 50 PLPVLSRAVAGCSNHNSVGEDKA-RETLERVMAQALLKARRRRSNVCAVCLAVA 102
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.9 bits (59), Expect = 9.8
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 4/124 (3%)
Frame = -3
Query: 413 REHAVAAARAMRRGDWRACLNYIVNEKMNAKVWDLMVGADNVRAMLGCLIREESLRTYLF 234
R H AAA A R G WR ++ + + +R +L + L T
Sbjct: 1585 RLHNEAAAAANRDGRWRNQMHKAAHNGCCRRAAQTRALCSVLRKLLVSQNLNDLLETIEG 1644
Query: 233 TYAHVYASLSLRSL-ADMFELPRQR---VHSLVSKTRQHYQLQTVSFSIPRTINFTNVYS 66
+V A + L + ADM R R + L ++ Y+L SFS+ T + +V
Sbjct: 1645 PLVNVLADMELWGIGADMDACLRARHIIIRKLKELEKEAYKLAGKSFSLNATADIADVL- 1703
Query: 65 FFHL 54
+ HL
Sbjct: 1704 YTHL 1707
>12_01_0280 + 2027708-2028169,2028287-2028403,2028493-2029746
Length = 610
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +2
Query: 281 LHEHYQLRPLNPKPWHSFFHSRCNLGK------LSNHLCAWPLQPPLRA-LASTQEG 430
L EH PL+ +PWH + C K + + W L+ P A L +T++G
Sbjct: 510 LIEHEDFNPLSSRPWHEEYRRVCEEFKRVGFQDVVPQIVLWNLKGPRSAGLTATKDG 566
>04_04_0859 + 28805836-28805842,28806405-28806492,28807474-28807558,
28807638-28807763,28807819-28807968,28808497-28808541,
28808612-28808875,28809843-28809887,28810395-28810430,
28812048-28812816,28813063-28813925,28814024-28814182,
28814440-28814558,28815356-28815417,28816677-28816805,
28817395-28817460,28817757-28817890,28818025-28818162,
28818630-28818889,28818996-28819107,28819590-28819675,
28820655-28820735,28822841-28822928,28823222-28823260,
28823847-28823964,28824063-28824130,28824884-28824981,
28825238-28825397,28825691-28825816,28825876-28825945,
28826046-28826449
Length = 1664
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 127 INSRQFLFRFQEQLISQMCIHFFIYLKFWKNKSCHLRKKK 8
+ ++ L + QE +S + +HF I WK K+ HL +++
Sbjct: 1478 VGTKHTLAQVQENGLSDLFLHFKITGSPWKRKNKHLNQQQ 1517
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,464,002
Number of Sequences: 37544
Number of extensions: 398044
Number of successful extensions: 957
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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