Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B16
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical pr...   193   1e-49
Z71266-1|CAA95839.1|  945|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    28   6.7  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    28   6.7  
U29244-3|AAC71088.1|  363|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical protein
            T23D8.4 protein.
          Length = 898

 Score =  193 bits (471), Expect = 1e-49
 Identities = 98/219 (44%), Positives = 141/219 (64%), Gaps = 1/219 (0%)
 Frame = -3

Query: 794  ILYNPTXANLGLXAFRRGNVKRSSWLFGRVNDDWKA*RAIGXXXXXXXXX*ALKGAGEN* 615
            ILYN T   LGL AFR G ++ +      + +  +A   +             +   E  
Sbjct: 565  ILYNRTICQLGLCAFRHGFIREAHQGLSEIQNTQRAKELLAQAVGTRQHEKTAEQ--EKI 622

Query: 614  KTTPDAFSHAH*SGXL-ECVYLVSAMLIEIPYMAAHEFDARRRMISKTFYQNLRASERQA 438
              +     H H +  L ECVYL+ +ML+EIP+MA+ EF+ RRRM+S++F+  L+ SE+ +
Sbjct: 623  DRSRQVPYHMHINVELMECVYLICSMLLEIPHMASCEFEMRRRMLSRSFHYQLKQSEKAS 682

Query: 437  LVGPPESMREHAVAAARAMRRGDWRACLNYIVNEKMNAKVWDLMVGADNVRAMLGCLIRE 258
            L GPPE+ REH VAA++AM  GDW+ C +YIVN+KMN KVW+L   A+ V+ M+   I+E
Sbjct: 683  LTGPPENTREHVVAASKAMLNGDWKKCQDYIVNDKMNQKVWNLFHNAETVKGMVVRRIQE 742

Query: 257  ESLRTYLFTYAHVYASLSLRSLADMFELPRQRVHSLVSK 141
            ESLRTYL TY+ VYA++SL+ LAD+FEL ++ VHS++SK
Sbjct: 743  ESLRTYLLTYSTVYATVSLKKLADLFELSKKDVHSIISK 781


>Z71266-1|CAA95839.1|  945|Caenorhabditis elegans Hypothetical
           protein R06C7.1 protein.
          Length = 945

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 194 LADMFELPRQRVHSLVSKTRQHYQLQTVSFSIPRTINFTNVYS 66
           LAD  + P  R+  L      H+Q+ ++S SIP  +   N Y+
Sbjct: 856 LADDCKAPMDRLEELTFTLCHHHQIVSLSTSIPTPLYVANEYA 898


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 262 RIRQPSIARTLSAPTIKSQTLAFIFSFTM*FRQALQSPL-RMALAAATACSRIDSGGPTS 438
           R R+ S +  LS+PT+    + F+      F     SPL       A A  ++++GGPT+
Sbjct: 276 RAREKSASNPLSSPTMSRPRIHFLHPAYQSFTNDSVSPLPPPPPEPAPAREKVENGGPTT 335


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 262 RIRQPSIARTLSAPTIKSQTLAFIFSFTM*FRQALQSPL-RMALAAATACSRIDSGGPTS 438
           R R+ S +  LS+PT+    + F+      F     SPL       A A  ++++GGPT+
Sbjct: 290 RAREKSASNPLSSPTMSRPRIHFLHPAYQSFTNDSVSPLPPPPPEPAPAREKVENGGPTT 349


>U29244-3|AAC71088.1|  363|Caenorhabditis elegans Hypothetical
           protein ZK1248.7 protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 194 LADMFELPRQRVHSLVSKTRQHYQLQTVSFSIPRTINFTNVYS 66
           LAD    P  R+  L      H+Q+  +S SIP  +   N Y+
Sbjct: 300 LADDCNAPMDRLEELTYTLCHHHQIVALSTSIPTPLYVANEYA 342


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,809,598
Number of Sequences: 27780
Number of extensions: 344233
Number of successful extensions: 864
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)