Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_B15
(815 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 37 0.004
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 37 0.004
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 34 0.028
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.45
SPBC11G11.01 |fis1||mitochondrial fission protein Fis1 |Schizosa... 29 0.60
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 29 0.60
SPAC30C2.06c |dml1||mitochondrial genome maintenance protein |Sc... 29 0.60
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 28 1.8
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 28 1.8
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 4.2
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 5.6
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 26 5.6
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 26 5.6
SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces pombe... 26 7.4
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 7.4
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 26 7.4
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 9.7
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 25 9.7
SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.7
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 25 9.7
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 36.7 bits (81), Expect = 0.004
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 415 LSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAESKSCKCKKIFG--RNIGRTRTQ 242
L ++P+NVE LV RG + SG KAI F+ + K + K +F R + T+ Q
Sbjct: 170 LRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPDCTTAKTLFKQVRKLENTKNQ 229
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = -2
Query: 475 GIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAESK 296
G+ + K GR+ +A +A I+P N + G +Y +KKA++ ++ + K + K
Sbjct: 506 GMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMIYERCKDYKKALDFYDRACKLDEK 565
Query: 295 S 293
S
Sbjct: 566 S 566
Score = 29.5 bits (63), Expect = 0.60
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = -2
Query: 448 HSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTK 308
HS+A +C+N+A+ +DP +G ++ + ++K+ F + +
Sbjct: 447 HSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIR 493
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 33.9 bits (74), Expect = 0.028
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = -2
Query: 478 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAES 299
EG A + +A KA+ IDP + R A Y G F+ A+ED T +
Sbjct: 89 EGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDP 148
Query: 298 KSCKCKKIFGRNIGRTRTQL 239
+ FGR +GR + L
Sbjct: 149 HHARA---FGR-LGRAKLSL 164
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.9 bits (64), Expect = 0.45
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 276 YLGETLVALGRSYED-ENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEP 100
Y+ E LG YE NQI++A AY+ + P + + L L+ ++
Sbjct: 650 YISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTNPHIKARLQLLRGPNNEQHKIVNA 709
Query: 99 AELLLPGLTGAK 64
+P + AK
Sbjct: 710 PPSNVPNVQTAK 721
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 252 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTAS 118
+G YE + A++AYE LA P H + L +L + ++S
Sbjct: 518 IGHVYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQSSS 562
>SPBC11G11.01 |fis1||mitochondrial fission protein Fis1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 472 IEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALY 362
+ H+K ++ E+ + LN LS DP + E L + LY
Sbjct: 86 LSHYKLKQYEESRRYLNMLLSKDPNSPEALKLKNRLY 122
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 29.5 bits (63), Expect = 0.60
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Frame = -2
Query: 706 SXKKTMDMKGENYEAILEKSPGFNNPNC----IQFLSEHLGIANMHCTNFSYLRGRFASS 539
S ++ K N+ + LE SPG N P+ L ++++ NF G S
Sbjct: 31 SPSSSIRKKKVNFSSELENSPGGNRPSFGLPKRGILKTSTPLSSIKQPNFQSFEGN--ES 88
Query: 538 EYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSI 407
E L++ Q+S F S E ++H + E + L+ L I
Sbjct: 89 EKETSLQELQSS---FCSGIENLQHVEKSARIETYSKLSSFLKI 129
>SPAC30C2.06c |dml1||mitochondrial genome maintenance protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 465
Score = 29.5 bits (63), Expect = 0.60
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Frame = -2
Query: 556 GRFASSEYA----DELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVE 389
G FAS EY DEL + + W + + E I+ + F LN+ALS+ N
Sbjct: 215 GGFAS-EYMKVVQDELGECRVPTWVY-GIREPIQSDSSATIDNHFGKLNEALSLSQLNGS 272
Query: 388 G-------LVARGA-LYANSGTFKKAIEDFETSTKAESKSC 290
+++G L+A+S AIE F T+ SC
Sbjct: 273 CSQYFPLCTISQGDDLWASSAKINLAIESFTLPTRVYGSSC 313
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 237 EDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELL 88
EDEN K EDC A + F + SL ++S T + L + +LL
Sbjct: 684 EDENHRVHHVKVSEDCTATVSF---GKQSLHIVRSSVTLLETLDDYGKLL 730
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -3
Query: 255 ALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGL 76
AL Y + + K Y++ LAI P +E +L+++ +PL + LL
Sbjct: 81 ALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLD 140
Query: 75 TGAKSYEMKETLKQLLN 25
+ Y + TL L+
Sbjct: 141 SSNLEYRLCFTLSAFLS 157
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 26.6 bits (56), Expect = 4.2
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = -3
Query: 237 EDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSY 58
E N + E +YE+CLAI+ EE + SL + K +E E + S
Sbjct: 915 EKANAMKERSLSYEECLAIV---EEGE-SLQLKTPELLYFKQYMEKTEWI--DSFNQISQ 968
Query: 57 EMKETLKQLLNLTEKKKK 4
+ T+++L+ L E+ +K
Sbjct: 969 KTDSTMEELVELIERGEK 986
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 26.2 bits (55), Expect = 5.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -3
Query: 243 SYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG 79
+Y+DEN + + D I E S+ F KSKT+ + I A + G
Sbjct: 889 NYDDENSLNRGGTSESDSEFIWDVDESNSGSIVFPKSKTSINLNNINSASASIMG 943
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 327 ILRPQLKLNPNHANARKYLGETLVALGRSYEDENQITEAQK 205
+L +K NP H A K+LG LG + EA K
Sbjct: 316 LLEQSVKENPQHFEAWKWLGRIHTLLGNESRVVEALLEAVK 356
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/79 (21%), Positives = 34/79 (43%)
Frame = -2
Query: 460 KAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAESKSCKCK 281
K+G++S+A + + ++ RN G + G L G KKA + + + K +
Sbjct: 53 KSGQYSQAELDAKRMIHLNARNARGYLRLGKLLQLDGFDKKADQLYTQGLRMVHKMDPLR 112
Query: 280 KIFGRNIGRTRTQL*RREP 224
+ + R ++ R P
Sbjct: 113 PVLKKVSQRLNERILRTRP 131
>SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 323 KIFYGLFECSTIGVQCSSSNKTLYISRIYAQSFIQALK 436
++ YGLFE I + C S + +Y+ + + LK
Sbjct: 262 RLAYGLFEAPEIQIICDPSLEMMYVESHLNHAVFEILK 299
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 201 YEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAEL 91
+ED + E SLD LK+KT+ P++ EL
Sbjct: 445 WEDARYFSKENRELLRSLDSLKAKTSKKDPIVRRNEL 481
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 177 PFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG 79
P+ E N+ D+L K +P P LL PG
Sbjct: 212 PWDEAISNTGDYLLYKKQCERPSYHPWNLLSPG 244
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 285 HLHDLDSALVEVSKSSMAFLN 347
HLHD ++ ++ +KS + F+N
Sbjct: 79 HLHDCEALFIKQTKSRLLFMN 99
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 181 DS*AIFISFLCFCYLVLVFI 240
D+ A F S+LCF +V+VFI
Sbjct: 511 DAGAFFQSYLCFPVVVIVFI 530
>SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 405
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 685 MKGENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFS 566
M E Y AI+ + G N I+ LSE +HC + S
Sbjct: 1 MAEEGYVAIVTGATGLNGAAIIKRLSEDDNCKTIHCISRS 40
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 9.7
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -2
Query: 574 NFSYLRGRFASS--EYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDP 401
N + G FA++ EY + ++A + F + A + K +E + NKA+ +DP
Sbjct: 407 NELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAA--YLKVMAPAECIRDCNKAIELDP 464
Query: 400 RNVEGLVARGALYANSGTFKKAIEDFETSTKAESKSCKCKKIFGRNIGRTRTQL 239
+ V + + K I+ +++ + + G+N+ +QL
Sbjct: 465 NFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNT----GKNLREIESQL 514
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,081,495
Number of Sequences: 5004
Number of extensions: 62743
Number of successful extensions: 217
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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