SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B15
         (815 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016422-4|AAG24172.1|  320|Caenorhabditis elegans Hypothetical ...    38   0.011
AL132948-2|CAC51076.2|  496|Caenorhabditis elegans Hypothetical ...    35   0.061
U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain (pr...    32   0.43 
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc...    32   0.43 
U21320-2|ABC71824.1|  973|Caenorhabditis elegans O-linked glcnac...    32   0.43 
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac...    32   0.43 
Z92849-6|CAB07429.2|  306|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81146-2|CAB03526.1|  340|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AF022979-3|AAB69902.2|  198|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z69385-7|CAA93429.2|  508|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U40409-5|AAL27247.1|  589|Caenorhabditis elegans Activator of g ...    28   7.0  
U40409-4|AAA81387.1|  579|Caenorhabditis elegans Activator of g ...    28   7.0  
Z83216-5|CAB62782.1|  221|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>AF016422-4|AAG24172.1|  320|Caenorhabditis elegans Hypothetical
           protein R09E12.3 protein.
          Length = 320

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = -2

Query: 478 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAES 299
           +G E+FK G +  A +  N+A+  DP N      R A       F++A++D +T  + +S
Sbjct: 146 KGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDS 205

Query: 298 KSCK 287
           K  K
Sbjct: 206 KFIK 209



 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 219 TEAQKAYEDCLAIIPFHEEAQNSL 148
           ++AQ+AYED L + P +EEA+  +
Sbjct: 225 SKAQRAYEDALQVDPSNEEAREGV 248


>AL132948-2|CAC51076.2|  496|Caenorhabditis elegans Hypothetical
           protein Y39B6A.2 protein.
          Length = 496

 Score = 35.1 bits (77), Expect = 0.061
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
 Frame = -2

Query: 466 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTK------- 308
           + K   +  A +  + A++IDP  V+G   R       G FKKA+ D++   K       
Sbjct: 72  YLKKELYGSALEDADNAIAIDPSYVKGFYRRATANMALGRFKKALTDYQAVVKVCPNDKD 131

Query: 307 AESKSCKCKKIFGR 266
           A +K  +C KI  R
Sbjct: 132 ARAKFDECSKIVRR 145


>U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 7 protein.
          Length = 491

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 21/78 (26%), Positives = 38/78 (48%)
 Frame = -2

Query: 460 KAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETSTKAESKSCKCK 281
           +AG  SEA    N+ L+ DP + + L  R   +     +  AIED++ +T+      + K
Sbjct: 303 EAGHISEAIAECNEILNDDPSDADILCERAEAHILDEDYDSAIEDYQKATEVNPDHREAK 362

Query: 280 KIFGRNIGRTRTQL*RRE 227
           +    +  R +TQ  +R+
Sbjct: 363 EGL-EHAKRLKTQAGKRD 379


>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
           transferase protein.
          Length = 1151

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 17/76 (22%), Positives = 37/76 (48%)
 Frame = -2

Query: 535 YADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYAN 356
           Y + +R A     A+ ++   ++    G  S A  C N+A+ I+P   +      +++ +
Sbjct: 488 YKEAIRIAPTFADAYSNMGNTLKEM--GDSSAAIACYNRAIQINPAFADAHSNLASIHKD 545

Query: 355 SGTFKKAIEDFETSTK 308
           +G   +AI+ + T+ K
Sbjct: 546 AGNMAEAIQSYSTALK 561



 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -3

Query: 252 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLK 136
           L  + +++  + EA++ Y   L + P H ++QN+L  +K
Sbjct: 403 LANALKEKGSVVEAEQMYMKALELCPTHADSQNNLANIK 441


>U21320-2|ABC71824.1|  973|Caenorhabditis elegans O-linked glcnac
           transferase protein1, isoform b protein.
          Length = 973

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 17/76 (22%), Positives = 37/76 (48%)
 Frame = -2

Query: 535 YADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYAN 356
           Y + +R A     A+ ++   ++    G  S A  C N+A+ I+P   +      +++ +
Sbjct: 310 YKEAIRIAPTFADAYSNMGNTLKEM--GDSSAAIACYNRAIQINPAFADAHSNLASIHKD 367

Query: 355 SGTFKKAIEDFETSTK 308
           +G   +AI+ + T+ K
Sbjct: 368 AGNMAEAIQSYSTALK 383



 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -3

Query: 252 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLK 136
           L  + +++  + EA++ Y   L + P H ++QN+L  +K
Sbjct: 225 LANALKEKGSVVEAEQMYMKALELCPTHADSQNNLANIK 263


>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
           transferase protein1, isoform a protein.
          Length = 1151

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 17/76 (22%), Positives = 37/76 (48%)
 Frame = -2

Query: 535 YADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYAN 356
           Y + +R A     A+ ++   ++    G  S A  C N+A+ I+P   +      +++ +
Sbjct: 488 YKEAIRIAPTFADAYSNMGNTLKEM--GDSSAAIACYNRAIQINPAFADAHSNLASIHKD 545

Query: 355 SGTFKKAIEDFETSTK 308
           +G   +AI+ + T+ K
Sbjct: 546 AGNMAEAIQSYSTALK 561



 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -3

Query: 252 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLK 136
           L  + +++  + EA++ Y   L + P H ++QN+L  +K
Sbjct: 403 LANALKEKGSVVEAEQMYMKALELCPTHADSQNNLANIK 441


>Z92849-6|CAB07429.2|  306|Caenorhabditis elegans Hypothetical
           protein H12D21.7 protein.
          Length = 306

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
 Frame = -3

Query: 180 IPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG-------LTGAKSYEMKETL 40
           IPF+E A+N +D+L ++TT      EP     P        +TGA S+ M + +
Sbjct: 179 IPFNEFAENKVDYLDARTTPQFTGEEPLNKTFPDTKATGSHVTGAISFPMAKVI 232


>Z81146-2|CAB03526.1|  340|Caenorhabditis elegans Hypothetical
           protein K10D11.2 protein.
          Length = 340

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -3

Query: 669 MKPYWRRAQASIIPTAFNSSLNILALPTCTAQISHI*EEDSLHRNTQMNYAK 514
           +KP +  A ++  PT+F   +N L  PT  ++ S + E  ++   T+  + K
Sbjct: 106 VKPKFTIAVSNNAPTSFGFQINWLPFPTTVSEYSDVTERATVLNATETTFTK 157


>AF022979-3|AAB69902.2|  198|Caenorhabditis elegans Hypothetical
           protein T02B11.4 protein.
          Length = 198

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = -2

Query: 517 QAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKK 338
           QA  +K   ++V  G+  + A        C+   L   P + + ++A+G     S +  K
Sbjct: 22  QANRAKVCQKAVNLGVTFYTAKELEPILACIEPTLYATPEDTDAIIAKGKSCVISNSMSK 81

Query: 337 AI 332
           AI
Sbjct: 82  AI 83


>Z69385-7|CAA93429.2|  508|Caenorhabditis elegans Hypothetical
           protein ZK593.8 protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -2

Query: 442 EAFQCLNKALSIDPRNVEGLVAR 374
           EA QC  KAL+ DP N E LV R
Sbjct: 199 EADQCYVKALAYDPGNSEALVLR 221


>U40409-5|AAL27247.1|  589|Caenorhabditis elegans Activator of g
           protein signallingprotein 3, isoform b protein.
          Length = 589

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/83 (19%), Positives = 35/83 (42%)
 Frame = -2

Query: 493 FRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETS 314
           ++   EG   F+  ++ +    L KAL +   +   L    A+Y   G     ++D+E +
Sbjct: 7   YKLTQEGERLFRMQKYEKGIDLLKKALEVGTDDFSLL---SAIYCQLGNAHTMLKDYEQA 63

Query: 313 TKAESKSCKCKKIFGRNIGRTRT 245
            K  +     +++ G   G  ++
Sbjct: 64  LKFHTYDILVERLLGNKEGEAKS 86


>U40409-4|AAA81387.1|  579|Caenorhabditis elegans Activator of g
           protein signallingprotein 3, isoform a protein.
          Length = 579

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/83 (19%), Positives = 35/83 (42%)
 Frame = -2

Query: 493 FRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFETS 314
           ++   EG   F+  ++ +    L KAL +   +   L    A+Y   G     ++D+E +
Sbjct: 7   YKLTQEGERLFRMQKYEKGIDLLKKALEVGTDDFSLL---SAIYCQLGNAHTMLKDYEQA 63

Query: 313 TKAESKSCKCKKIFGRNIGRTRT 245
            K  +     +++ G   G  ++
Sbjct: 64  LKFHTYDILVERLLGNKEGEAKS 86


>Z83216-5|CAB62782.1|  221|Caenorhabditis elegans Hypothetical
           protein C08F11.7 protein.
          Length = 221

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = -3

Query: 246 RSYEDEN--QITEAQKAYEDCLAIIPFHEEA--QNSLDFLKSKTTASKPLIEPAELLLPG 79
           RS E E    ++ A  A     A++P  ++A   N L FLK +T   +  +E   L    
Sbjct: 15  RSDESETIGDVSHASSAVAYLPAVLPTSQKAIPSNFLFFLKQQTKDIQKPLELRSLFRGY 74

Query: 78  LTGAKSYEMKETLKQLL 28
           +  AKS +  ET+ +L+
Sbjct: 75  IAYAKSRKQMETMMRLI 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,900,610
Number of Sequences: 27780
Number of extensions: 344559
Number of successful extensions: 1022
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -