Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B14
         (805 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000514BDB Cluster: PREDICTED: similar to quaking re...    41   0.042
UniRef50_UPI00015B5A78 Cluster: PREDICTED: similar to ENSANGP000...    38   0.13 

>UniRef50_UPI0000514BDB Cluster: PREDICTED: similar to quaking
           related 54B CG4816-PB, isoform B; n=2;
           Endopterygota|Rep: PREDICTED: similar to quaking related
           54B CG4816-PB, isoform B - Apis mellifera
          Length = 370

 Score = 40.7 bits (91), Expect = 0.042
 Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
 Frame = -3

Query: 740 IAPPXXXHAXIANALAEVXKYLGPGYK*NCMXCHQMRDIDVRGA-ERTXXXXXXXXXXXX 564
           +APP   +A IA ALAEV KYL P    N +   QMR++++  A + T            
Sbjct: 174 LAPPAEAYARIAFALAEVRKYLIPDNNDN-IRQEQMREMEMNMADDPTSNDDRRPSVRGV 232

Query: 563 XXXXXXXXXXXPKNKIISILERARTAMEGSYSYEDHYAPP 444
                            S  +RAR AM+ SY YE    PP
Sbjct: 233 PGAGGILRPSARPTMQRSSRDRARVAMDQSYGYETATPPP 272


>UniRef50_UPI00015B5A78 Cluster: PREDICTED: similar to
           ENSANGP00000024769; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000024769 - Nasonia
           vitripennis
          Length = 399

 Score = 37.5 bits (83), Expect = 0.39
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -3

Query: 527 KNKIISILERARTAMEGSYSYEDHYAPP 444
           K K+ SIL+RAR AM+ SY Y+   APP
Sbjct: 252 KTKVFSILDRARVAMDQSYGYDSAPAPP 279



 Score = 35.5 bits (78), Expect(2) = 0.13
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = -3

Query: 740 IAPPXXXHAXIANALAEVXKYLGPGYK*NCMXCHQMRDIDV 618
           +APP   HA IA ALAEV KYL P    N +   QMR++++
Sbjct: 155 LAPPAEAHARIAFALAEVRKYLIPDNNDN-IRQEQMREMEL 194



 Score = 22.6 bits (46), Expect(2) = 0.13
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 509 ILERARTAMEGSYSYEDHYAPPEPPMRG 426
           I ER  +A  G         PP PPMRG
Sbjct: 200 IEERRPSARGGILRPVSRPGPPGPPMRG 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,507,397
Number of Sequences: 1657284
Number of extensions: 6343738
Number of successful extensions: 14927
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14910
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)