Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B13
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   1.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   3.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.2  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 369 NSPLTPQHINNPNYIFLHYNMQKNFIHKQSFFSGE 265
           N P +  +IN+ NY+  +     N+ H    +SG+
Sbjct: 364 NHPNSENYINHQNYVQGYQGEHPNYNHYGYHYSGD 398


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -1

Query: 310 YAEKFYS--QTKLLLG*ETNKKKQLSHFFHKNNRVFFVWQH*IIHDSFKSST*RSFLNQY 137
           +   FY   +T   L  + +K +   H +  NN ++   +   I++S + S  + +LN +
Sbjct: 11  WTNSFYQNYKTNPFLASDCDKNQNTEHNYTHNNEMYHSVKEEPIYESCRFSINQPYLNHF 70

Query: 136 SKCTFKI*IHD 104
                 +  HD
Sbjct: 71  DNSVTPMVNHD 81


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 369 NSPLTPQHINNPNYIFLHYNMQKNFIHKQSFFSGE 265
           N P +  +IN+ NY+  +     N+ H    +SG+
Sbjct: 312 NHPNSENYINHQNYVQGYQGEHPNYNHYGYHYSGD 346


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 566  HNSLPTYNCVLGEINLELXFNGV 634
            HN    Y CVLGE+  +    G+
Sbjct: 1113 HNCNAYYRCVLGELRKQYCAGGL 1135


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 264 KLTKKNNFLIFSTKIIVFFSYGNIRL 187
           KLT + + +I  TKI   FS G +++
Sbjct: 85  KLTNRESSIIDKTKISFNFSQGPVKI 110


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 481 QRNPGAA*SCPCCRTAGPRARGGTSCCCAQ 570
           +R P  A S PC +  G  A  G   CC+Q
Sbjct: 86  EREPCIAGSAPCRKNTGRCAFDG--ICCSQ 113


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 448 CVLKSRPDRAXPAAHLHVHGIP 383
           CV  S+   A  +A ++V+G+P
Sbjct: 491 CVASSKVGSADHSARINVYGLP 512


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 563 QQHDVPPRARGPAVRQQGQLHAAPGFR*RPSR 468
           QQH +    +G  + QQG  H  P  + +P++
Sbjct: 185 QQHMMYGGQQGANMHQQGPPHQQPPIQQQPNQ 216


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 563 QQHDVPPRARGPAVRQQGQLHAAPGFR*RPSR 468
           QQH +    +G  + QQG  H  P  + +P++
Sbjct: 187 QQHMMYGGQQGANMHQQGPPHQQPPIQQQPNQ 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,971
Number of Sequences: 336
Number of extensions: 3165
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)