Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B12
         (869 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   7.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   7.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   7.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.5  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   9.5  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   9.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.5  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 512 RERLVKGLSCPRSPAPA 562
           R+RLVK   C RS AP+
Sbjct: 137 RDRLVKEGICDRSTAPS 153


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 520 TLSSLY*ITPFPSLAFREIHNTFAFRIYIVTSI 422
           T+  L+ +        REI+  FAF++ + TS+
Sbjct: 132 TIKKLFNLHKILVKVVREINGIFAFQVLMCTSM 164


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 103 FISYNFFFSRSIKVFDY 53
           F+SYN +  +++  F+Y
Sbjct: 192 FVSYNIYVCQTVSNFEY 208


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 103 FISYNFFFSRSIKVFDY 53
           F+SYN +  +++  F+Y
Sbjct: 118 FVSYNIYVCQTVSNFEY 134


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 385 LGLFYHACW 411
           LGL++HA W
Sbjct: 420 LGLYFHAAW 428


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = -1

Query: 476 LSRDPQYFCFSYLYSNFNSFRLQHA**NNPRKYTLCRGNRLCLHS 342
           L +DP+ +   ++    N    QH     P    L  G  LCL S
Sbjct: 32  LPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMS 76


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = -1

Query: 476 LSRDPQYFCFSYLYSNFNSFRLQHA**NNPRKYTLCRGNRLCLHS 342
           L +DP+ +   ++    N    QH     P    L  G  LCL S
Sbjct: 32  LPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMS 76


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 596 PPGTVGTRRQGRSCCSQPRGTPS 664
           P GT+G    G+    +P G P+
Sbjct: 417 PDGTMGYMMDGQQMMHRPPGDPA 439


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,550
Number of Sequences: 336
Number of extensions: 3408
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)