Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_B12
(869 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 144 6e-35
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 144 6e-35
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 144 8e-35
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 127 1e-29
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 126 3e-29
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 77 3e-22
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 88 1e-17
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 54 2e-07
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 52 6e-07
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 49 4e-06
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 4e-06
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 49 4e-06
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 49 4e-06
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 6e-06
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 48 1e-05
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 47 2e-05
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 47 2e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 37 0.019
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 31 1.6
SB_47959| Best HMM Match : rve (HMM E-Value=3e-29) 30 2.1
SB_16977| Best HMM Match : Involucrin (HMM E-Value=0.012) 30 2.1
SB_3768| Best HMM Match : Involucrin (HMM E-Value=0.021) 30 2.1
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 30 2.8
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 29 4.9
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 29 4.9
SB_17867| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_52546| Best HMM Match : ResIII (HMM E-Value=0.21) 28 8.6
SB_36714| Best HMM Match : RBM1CTR (HMM E-Value=0.72) 28 8.6
SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07) 28 8.6
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 144 bits (350), Expect = 6e-35
Identities = 68/101 (67%), Positives = 75/101 (74%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + + T IG ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 290 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 349
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIE 543
EMEF EAESNMNDLVSEYQQYQ+ATA+E+ EFD E+E+ E
Sbjct: 350 EMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEEAEE 390
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 144 bits (350), Expect = 6e-35
Identities = 68/101 (67%), Positives = 75/101 (74%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + + T IG ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIE 543
EMEF EAESNMNDLVSEYQQYQ+ATA+E+ EFD E+E+ E
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEEAEE 445
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 144 bits (349), Expect = 8e-35
Identities = 67/98 (68%), Positives = 74/98 (75%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + + T IG ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQ 552
EMEF EAESNMNDLVSEYQQYQ+ATA+E+ EFD E+E+
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEE 442
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 127 bits (306), Expect = 1e-29
Identities = 60/100 (60%), Positives = 69/100 (69%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C I P G + A T +G +T Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 172 IPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMD 231
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEI 546
EMEF EAESNM+DL++EYQQYQEA AD + E E+ E+
Sbjct: 232 EMEFTEAESNMHDLIAEYQQYQEAEADIEGEVSDEELPEV 271
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 126 bits (303), Expect = 3e-29
Identities = 60/99 (60%), Positives = 68/99 (68%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C I P G + A T +G +T Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 110 IPNNVKTTVCDIAPKGLKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMD 169
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQE 549
EMEF EAESNM+DL++EYQQYQEA AD + E E+ E
Sbjct: 170 EMEFTEAESNMHDLIAEYQQYQEAEADIEGEVSDEELPE 208
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 76.6 bits (180), Expect(2) = 3e-22
Identities = 35/70 (50%), Positives = 42/70 (60%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C +PP G + A T + ST Q F+ Q AMFRR+AFLHWYT EGMD
Sbjct: 164 IPNNMKTAVCDVPPVGLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRAFLHWYTTEGMD 223
Query: 665 EMEFPEAESN 636
+EF E + N
Sbjct: 224 PLEFTEIKRN 233
Score = 47.2 bits (107), Expect(2) = 3e-22
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = -1
Query: 647 AESNMNDLVSEYQQYQEATADED--AEFDREQEQEIEDN*VLSLDALVSILNNPLSISRL 474
A+SN+NDL+SEYQQY++A +D+D D E+ +E + ++ L+ + + P+ SR
Sbjct: 259 ADSNLNDLISEYQQYEDAKSDDDVITASDEEEAEEFVEARIVG-SKLILLSSTPVCFSRS 317
Query: 473 SRDPQY 456
R Y
Sbjct: 318 PRPRVY 323
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 87.8 bits (208), Expect = 1e-17
Identities = 45/101 (44%), Positives = 60/101 (59%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C +PP + + + I +T Q LFK MFRR+AFLHWYT EGMD
Sbjct: 250 IPNNGKVAVCDVPPHDMKMSASCISSNTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMD 309
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIE 543
+F EA++++ DL+S YQQ ++ A ED FD E + IE
Sbjct: 310 SQQFEEADNDILDLISTYQQCEDMKA-EDC-FDDEDIKLIE 348
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 54.0 bits (124), Expect = 2e-07
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + D D E + E+
Sbjct: 96 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVDNDGETEAEE 148
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 52.4 bits (120), Expect = 5e-07
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAE 573
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + +ED E
Sbjct: 814 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVAVESVEEDEE 861
Score = 47.2 bits (107), Expect = 2e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQ 606
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 383 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 52.0 bits (119), Expect = 6e-07
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + +E+ E + E+
Sbjct: 983 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEEEGEEEGEE 1035
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQE 549
M+ ++AF+HWY GEGM+E EF EA DL + + Y+E D E + E+E E
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGVDSVEEGEEEEEGE 450
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 49.2 bits (112), Expect = 4e-06
Identities = 20/53 (37%), Positives = 35/53 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ A + +D+ D ++
Sbjct: 550 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV-GADSPDDSVVDEDE 601
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQE 555
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + E + +E
Sbjct: 335 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEEGEE 388
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + E + E+
Sbjct: 1178 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEGEE 1230
Score = 47.2 bits (107), Expect = 2e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQ 606
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 769 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQE 555
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + E + +E
Sbjct: 831 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEEGEE 884
Score = 47.2 bits (107), Expect = 2e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQ 606
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQE 555
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + E + +E
Sbjct: 323 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEEGEE 376
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQE 555
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + E + +E
Sbjct: 196 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEEGEE 249
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + E + E+
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEEGEE 450
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 48.8 bits (111), Expect = 6e-06
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = -1
Query: 713 FRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + E D E+
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEGEGEEDDEE 64
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQE 555
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + D +E
Sbjct: 363 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVGDGEDEDGGEE 416
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQE 555
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + + + D +E
Sbjct: 311 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVGDGEDEDGGEE 364
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 47.2 bits (107), Expect = 2e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQ 606
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 196 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 47.2 bits (107), Expect = 2e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQ 606
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++
Sbjct: 382 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = -1
Query: 830 KXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTG-EGMDEMEF 654
K C +PP G + + ++ + F + +++RKA +H YT +G++ +F
Sbjct: 397 KTGLCSVPPVGQPYSLLTLANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQF 456
Query: 653 PEAESNMNDLVSEY 612
+ +++ L+ EY
Sbjct: 457 DDGLESLSWLIQEY 470
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 LSCPRSPAPAPGQTLRPRRRWPPGTVGTR-RQGRSCCSQPRGTPSRPCPRRCTNAK 697
L+CP P PG+ P ++ G G R R+G P+GTP + R +K
Sbjct: 124 LTCPPGPRGPPGRPGHPGQKGTRGRRGQRGRRGNPGSPGPKGTPGKDGRRGAVGSK 179
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -1
Query: 650 EAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN*VLSLDALVSILNNP 492
+A +N + + Q+ QE +++ EQE+++EDN SL+ + +NP
Sbjct: 3777 KAHREVNRIEQDGQEVQEEQLEDNPTVPLEQEEQLEDNPTASLEQEEQLEDNP 3829
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -1
Query: 668 DEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN*VLSLDALVSILNNPL 489
D+ + + + N V E QQ + DE D EQ ++ +LDA+ +I+N L
Sbjct: 546 DDTDKQDKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEEL 605
Query: 488 SIS 480
++
Sbjct: 606 RMA 608
>SB_47959| Best HMM Match : rve (HMM E-Value=3e-29)
Length = 622
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -1
Query: 650 EAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN*VLSLDALVSILNNP 492
+A N + + Q+ QE +++ EQE+++EDN + L+ + +NP
Sbjct: 402 KAHREANRIEQDGQEVQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNP 454
>SB_16977| Best HMM Match : Involucrin (HMM E-Value=0.012)
Length = 247
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -1
Query: 650 EAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN*VLSLDALVSILNNP 492
+A N + + Q+ QE +++ EQE+++EDN + L+ + +NP
Sbjct: 27 KAHHEANRIEQDGQEVQEKQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNP 79
>SB_3768| Best HMM Match : Involucrin (HMM E-Value=0.021)
Length = 205
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -1
Query: 650 EAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN*VLSLDALVSILNNP 492
+A N + + Q+ QE +++ EQE+++EDN + L+ + +NP
Sbjct: 96 KAHREANRIEQDGQEVQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNP 148
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 659 EFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN 537
+FP A+ + + S Q++QE +D+D D E +I D+
Sbjct: 1181 QFPAAQMDTGNASSTQQKHQEIPSDDDLSSDGEDGPDIYDH 1221
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 680 GEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQE 549
G G D ++ E SE ++ +EAT +E EF QE+E
Sbjct: 699 GTGDDTSDYLHTEEGTPADTSEEEEEEEATEEESTEFLVRQEEE 742
>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 689 WYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIED 540
+ T E DE + + N +D EY Y+E + E + E E ED
Sbjct: 316 YLTYESSDEQMYDTDDLNDDDTRGEYDDYEEMLRKQMEEAETPTESESED 365
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -1
Query: 680 GEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIED 540
G+ D+++ E N+ DL Q+ ++ DED E + EQE++ ++
Sbjct: 265 GDKEDDVKPKNYEGNVEDL-GGVQKKDDSVKDEDEEEESEQEEDKDE 310
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 527 KGLSCPRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPRGTPSRP 670
+G PR P PG +P R PPG G + G + PRG P
Sbjct: 43 RGRRGPRGPPGKPGADGKPGIRGPPGPKGDK--GEKGDAGPRGLKGDP 88
>SB_17867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 674 GMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN 537
G DE E E E + E ++ ++ +E+ E + E+E++ ED+
Sbjct: 6 GADEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEDKEDD 51
>SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = -1
Query: 710 RRKAFLHWY--TGEGMDEMEFP-EAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIED 540
++K+ W+ T E M +A +N + + Q+ QE +++ QE+++ED
Sbjct: 568 KQKSVGEWFKATMEASYNMNITFKAHREVNRIEQDGQEVQEEQLEDNPTVPLGQEEQLED 627
Query: 539 N*VLSLDALVSILNNP 492
N + L+ + +NP
Sbjct: 628 NPTVPLEQEEQLEDNP 643
>SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 683 TGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIE 543
TGE DE E E D+ Y++ DE+A +D E+E EI+
Sbjct: 341 TGEENDE-EVGSDEEGEVDIERGYEEETGEENDEEAGYDEEEEVEIK 386
>SB_52546| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 293
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +2
Query: 545 RSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPRGTPSRPC-PRRCTNAK 697
R+P + +P W P ++ S +P PS PC P T+AK
Sbjct: 32 RNPRCGEWRHKKPGYEWRPEAAWGPKKSESLAKEPSTAPSLPCDPVAATSAK 83
>SB_36714| Best HMM Match : RBM1CTR (HMM E-Value=0.72)
Length = 300
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 11/64 (17%)
Frame = +2
Query: 545 RSP-APAPGQTL---RPRRRWPPGTVGTRRQG-------RSCCSQPRGTPSRPCPRRCTN 691
R+P P P TL +P W GT T R+ RS C PRG SR C
Sbjct: 180 RAPNRPRPDLTLDESKPEGAWQSGTESTERRKSRFVSPLRSSCQGPRGRASRSWDGACAP 239
Query: 692 AKKP 703
P
Sbjct: 240 TMPP 243
>SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07)
Length = 502
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 183 NQVQPYKKKDLFPLCDSVTAPRACSAEGLASLRVAVYCNKHSRAALR 323
+++Q L LC SV+ C+ A L ++C + S A LR
Sbjct: 136 SRLQQLASLSLTDLCQSVSGDEGCAVAETAELIALMHCLESSAATLR 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,594,141
Number of Sequences: 59808
Number of extensions: 432999
Number of successful extensions: 1717
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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