Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_B12
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 145 3e-35
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 139 3e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 136 2e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 136 2e-32
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 135 4e-32
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 132 2e-31
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 78 9e-15
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 78 9e-15
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 51 1e-06
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 50 2e-06
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 50 2e-06
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 50 2e-06
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 50 2e-06
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 50 2e-06
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 50 2e-06
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 50 2e-06
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 50 3e-06
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 48 7e-06
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 48 7e-06
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 48 7e-06
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 48 7e-06
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 36 0.050
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 35 0.066
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 35 0.066
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 35 0.066
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 33 0.35
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 33 0.35
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 33 0.35
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.81
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.81
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.81
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.81
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.1
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 31 1.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.4
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 31 1.4
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.4
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 2.5
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 30 2.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 2.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.3
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 4.3
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 29 4.3
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 4.3
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 4.3
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 4.3
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 5.7
AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical ... 29 5.7
Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.5
U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter... 28 7.5
U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter... 28 7.5
L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein. 28 7.5
AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical ... 28 7.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 145 bits (352), Expect = 3e-35
Identities = 69/101 (68%), Positives = 76/101 (75%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + A T +G ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIE 543
EMEF EAESNMNDLVSEYQQYQEATAD++ EFD E +Q++E
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQEATADDEGEFD-EHDQDVE 444
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 139 bits (336), Expect = 3e-33
Identities = 66/93 (70%), Positives = 69/93 (74%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + + T IG ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFD 567
EMEF EAESNMNDLVSEYQQYQEATA+ED E D
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQEATAEEDGELD 437
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 136 bits (329), Expect = 2e-32
Identities = 68/97 (70%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + + T IG ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDA--EFDRE 561
EMEF EAESNMNDLVSEYQQYQEA ADEDA FD E
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQEAAADEDAAEAFDGE 441
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 136 bits (329), Expect = 2e-32
Identities = 68/97 (70%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + + T IG ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDA--EFDRE 561
EMEF EAESNMNDLVSEYQQYQEA ADEDA FD E
Sbjct: 405 EMEFTEAESNMNDLVSEYQQYQEAAADEDAAEAFDGE 441
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 135 bits (326), Expect = 4e-32
Identities = 64/97 (65%), Positives = 70/97 (72%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + A T +G ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQE 555
EMEF EAESNMNDL+SEYQQYQEATA++D + E E
Sbjct: 405 EMEFTEAESNMNDLISEYQQYQEATAEDDVDGYAEGE 441
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 132 bits (320), Expect = 2e-31
Identities = 65/99 (65%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
IP N K C IPP G + A T +G ST Q LFK Q AMFRRKAFLHWYTGEGMD
Sbjct: 345 IPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD 404
Query: 665 EMEFPEAESNMNDLVSEYQQYQEATADEDA--EFDREQE 555
EMEF EAESNMNDL+SEYQQYQEATA+++ EF E E
Sbjct: 405 EMEFTEAESNMNDLISEYQQYQEATAEDEPLDEFAGEGE 443
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 77.8 bits (183), Expect = 9e-15
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
+P + C IP G + + T I ST Q K Q +FRRKAFLHWYT M+
Sbjct: 343 LPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---ME 399
Query: 665 EMEFPEAESNMNDLVSEYQQYQE 597
E EF +AE+ +NDL+SE+QQY++
Sbjct: 400 ESEFTDAENKVNDLISEFQQYEK 422
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 77.8 bits (183), Expect = 9e-15
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = -1
Query: 845 IPXNXKXXXCXIPPXGXQXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMD 666
+P + C IP G + + T I ST Q K Q +FRRKAFLHWYT M+
Sbjct: 343 LPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---ME 399
Query: 665 EMEFPEAESNMNDLVSEYQQYQE 597
E EF +AE+ +NDL+SE+QQY++
Sbjct: 400 ESEFTDAENKVNDLISEFQQYEK 422
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQE 555
M+ ++AF+HWY GEGM+E EF EA DL + + Y+E AD DA + + E
Sbjct: 393 MYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGADSDANDNGDDE 443
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = -1
Query: 794 QXAXTXIGXSTPXQGLFKXXXXQXXAMFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSE 615
Q A + +T Q + + M+ ++AF+HWY GEGM+E EF EA +M L +
Sbjct: 372 QRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKD 431
Query: 614 YQQYQEATADEDAE 573
Y++ + D + E
Sbjct: 432 YEEVGVDSFDPNDE 445
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFD 567
M+ ++AF+HW+ GEGM+E EF EA ++ L +Y + TAD + E D
Sbjct: 401 MYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTADLEEEND 450
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAE 573
M+ ++AF+HWY GEGM+E EF EA +M L +Y++ E +D +
Sbjct: 404 MYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDID 451
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAE 573
M+ ++AF+HWY GEGM+E EF EA +M L +Y++ E +D +
Sbjct: 376 MYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDID 423
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQE 549
M+ ++AF+HWY GEGM+E EF EA DL + + Y+E AD + + E+ +E
Sbjct: 396 MYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVGADSNEGGNEEEGEE 448
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQE 549
M+ ++AF+HWY GEGM+E EF EA DL + + Y+E AD + + E+ +E
Sbjct: 396 MYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVGADSNEGGNEEEGEE 448
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQ 552
M+ ++AF+HWY GEGM+E EF EA DL + + Y+E AD + + E E+
Sbjct: 396 MYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVGADSNEGGEEEGEE 447
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ A ++E E D E+
Sbjct: 396 MYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEV-GADSNEGLEEDGEE 447
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQ 552
M+ ++AF+HWY GEGM+E EF EA DL + + Y+E AD + + E E+
Sbjct: 396 MYAKRAFVHWYVGEGMEEGEFTEAR---EDLAALEKDYEEVGADSNEGGEEEGEE 447
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ A ++E E D E+
Sbjct: 396 MYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEV-GADSNEGLEEDGEE 447
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQ 558
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ A ++E E D E+
Sbjct: 33 MYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEEV-GADSNEGLEEDGEE 84
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFD 567
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + D E D
Sbjct: 403 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDAGEPDEEDD 452
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 48.4 bits (110), Expect = 7e-06
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAE 573
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + +++ E
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGE 445
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 48.4 bits (110), Expect = 7e-06
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAE 573
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + +++ E
Sbjct: 397 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGE 444
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 48.4 bits (110), Expect = 7e-06
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAE 573
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + +++ E
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGE 445
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 48.4 bits (110), Expect = 7e-06
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = -1
Query: 716 MFRRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAE 573
M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ + +++ E
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGE 445
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 35.5 bits (78), Expect = 0.050
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPRGTPSRP 670
P P PGQ +P +R PPG G G P G P RP
Sbjct: 177 PSGPPGPPGQPGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRP 219
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P PA APG+ +P R PGT GT + + C P +PCP+
Sbjct: 106 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQ 152
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P PA APG+ +P R PGT GT + + C P +PCP+
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQ 147
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 35.1 bits (77), Expect = 0.066
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P PA APG+ +P R PGT GT + + C P +PCP+
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQ 147
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1
Query: 668 DEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN*VL 528
DE E+ + E + D EY+ E DE+ E++ E+E E ED VL
Sbjct: 816 DESEYYDDEEEIEDESDEYED--EEYWDEEIEYEDEEEYEYEDEEVL 860
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 677 EGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIED 540
E DE E E E D SE + +E DE++E++ E+E E E+
Sbjct: 889 EDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEE 934
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 677 EGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIED 540
E DE E E E D SE + +E DE++E++ E+E E E+
Sbjct: 889 EDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEE 934
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -1
Query: 650 EAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN*VLSLDALVSILNN-PLSISRL 474
E+E + EY++Y++ DED ++ E+E E+ED+ L+ L ++ L S +
Sbjct: 672 ESEEEEYEEEDEYEEYED-DEDEDEYYEEEEENEVEDDDFLTETQLEELMEQIILQTSVM 730
Query: 473 SRD 465
RD
Sbjct: 731 FRD 733
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSC-CSQPRGTPSRPCP 676
P P +PG+ +P + PG G +G S C P +PCP
Sbjct: 111 PPGPGGSPGKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCP 156
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSC-CSQPRGTPSRPCP 676
P P +PG+ +P + PG G +G S C P +PCP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSC-CSQPRGTPSRPCP 676
P P +PG+ +P + PG G +G S C P +PCP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSC-CSQPRGTPSRPCP 676
P P +PG+ +P + PG G +G S C P +PCP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSC-CSQPRGTPSRPCP 676
P P +PG+ +P + PG G +G S C P +PCP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P+ P PG+ +P + PG GT R + C P +PCP+
Sbjct: 94 PQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQ 140
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPRGTPSRPCP 676
PR P PG +P R PPG GT + + G P RP P
Sbjct: 238 PRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGR-AGAPGRPGP 281
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P PA PG+ RP + PG G R + C P +PCP+
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQ 150
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPRGTPSRPCP 676
PR P PG +P R PPG GT + + G P RP P
Sbjct: 219 PRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGR-AGAPGRPGP 262
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P PA PG+ RP + PG G R + C P +PCP+
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQ 150
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P PA PG+ +P R PG G + + C P +PCP+
Sbjct: 108 PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQ 154
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P PA PG+ RP + PG G R + C P +PCP+
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQ 150
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
P PA PG+ +P R PG G + + C P +PCP+
Sbjct: 108 PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQ 154
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = +2
Query: 509 RRERLVKGLSCPRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPRGTPSRPCPRR 682
RR R G S RSP PRRR P + R+ RS S R P PRR
Sbjct: 465 RRRRSPSG-SKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPPPPRR 521
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 551 PAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPRRCTNAKKP 703
PA PG+ RP + PG G R + C P +PCP A P
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSC-CSQPRGTPSRPCP 676
P P PG+ P + PG G +G + C P +PCP
Sbjct: 121 PPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCP 166
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 551 PAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPRRCTNAKKP 703
PA PG+ RP + PG G R + C P +PCP A P
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 551 PAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPRRCTNAKKP 703
PA PG+ RP + PG G R + C P +PCP A P
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCP 676
P PA APG RP + PG G + C P +PCP
Sbjct: 109 PAGPAGAPGNPGRPGKPGAPGLPGNPGKPPVQPCEPITPPPCKPCP 154
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = +2
Query: 533 LSCPRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCS----QPRGTPSRPC 673
LSCP+ P PG P PG G RQGRS QP P PC
Sbjct: 93 LSCPQGPPGPPG---APGPDGQPGDAG--RQGRSGDDGFDIQPESEPELPC 138
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 551 PAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPRRCTNAKKP 703
PA PG+ RP + PG G R + C P +PCP A P
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 551 PAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPRRCTNAKKP 703
PA PG+ RP + PG G R + C P +PCP A P
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGP 158
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 PAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
PA PG+ RP + PG G R + C P +PCP+
Sbjct: 112 PAGTPGKPGRPGKAGAPGLPGNPGRPPQQPCEPITPPPCKPCPQ 155
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 178 YLRCNFSSSFCNQCDELLAFSNE 110
YLRC++ +S QC E FSN+
Sbjct: 1126 YLRCSYGASKLQQCSEDRVFSND 1148
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +2
Query: 527 KGLSCPRSPAP--APGQTLRPRRRWPPGTVGTRRQGRSCCSQPRGTPSRPCP 676
+G P P P PG+ P R PG G + + C + P PCP
Sbjct: 97 QGCCLPGLPGPDGPPGKNGAPGRPGAPGAPGFPGRPPAVCEEITEPPCTPCP 148
>AL021346-1|CAA16154.1| 823|Caenorhabditis elegans Hypothetical
protein H37A05.1 protein.
Length = 823
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = -1
Query: 650 EAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN*VLSLDALVSILNNPLSISRLS 471
+AE + + S + + +TADE+ + + EQE + +SLD L++ +NP+ I +
Sbjct: 358 DAEKSTSRWSSWFWRSSTSTADEEQKEKEKLEQEEQG---ISLDELLNSSSNPVEIEKYL 414
Query: 470 RDP 462
P
Sbjct: 415 GKP 417
>Z81544-7|CAB04432.2| 551|Caenorhabditis elegans Hypothetical
protein F49C5.3 protein.
Length = 551
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 710 RRKAFLHWYTGEGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN 537
++ F H Y E E E + ES+ EY++ + DE E R +EQEIE+N
Sbjct: 79 KKVIFEHGYGIEDDIEDEIDDEESDDE----EYEESGNGSEDEVEEEVRVEEQEIENN 132
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = +2
Query: 542 PRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPRGTPSRPCPRRC 685
P P APGQ RP PG G R G+S S RG CP+ C
Sbjct: 248 PAGPKGAPGQPGRPGPDGHPGQPG--RPGQSGGSGNRGV----CPKYC 289
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 PAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
PA PG+ RP + PG G R + C P +PCP+
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQ 150
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 PAPAPGQTLRPRRRWPPGTVGT-RRQGRSCCSQPRGTPSRPCPR 679
PA PG+ RP + PG G R + C P +PCP+
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQ 150
>U50191-2|AAK31556.2| 335|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform a protein.
Length = 335
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 524 VKGLSCPRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPR-GTPSRPCPR 679
+ G PR + PG+ P PG GT +Q R P RPCP+
Sbjct: 105 IPGPPGPRGSSGTPGKPGLPGNAGKPGMPGTTPNQTCPLNQVREPPPCRPCPK 157
>U50191-1|AAO38600.2| 372|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 10, isoform b protein.
Length = 372
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 524 VKGLSCPRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPR-GTPSRPCPR 679
+ G PR + PG+ P PG GT +Q R P RPCP+
Sbjct: 142 IPGPPGPRGSSGTPGKPGLPGNAGKPGMPGTTPNQTCPLNQVREPPPCRPCPK 194
>L12692-1|AAA17395.2| 356|Caenorhabditis elegans collagen protein.
Length = 356
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 524 VKGLSCPRSPAPAPGQTLRPRRRWPPGTVGTRRQGRSCCSQPR-GTPSRPCPR 679
+ G PR + PG+ P PG GT +Q R P RPCP+
Sbjct: 126 IPGPPGPRGSSGTPGKPGLPGNAGKPGMPGTTPNQTCPLNQVREPPPCRPCPK 178
>AL110478-3|CAB54348.1| 380|Caenorhabditis elegans Hypothetical
protein Y26D4A.8 protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 677 EGMDEMEFPEAESNMNDLVSEYQQYQEATADEDAEFDREQEQEIEDN 537
E EME +SN+N + SE QYQ + E F ++ Q++++N
Sbjct: 69 EDKKEME-GNIQSNINAMKSENLQYQTQSHQEKKVFAEKKLQKLKEN 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,926,598
Number of Sequences: 27780
Number of extensions: 324189
Number of successful extensions: 1310
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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