Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_B11
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0355 + 19822110-19824491                                         30   2.0  
12_01_0319 + 2440129-2440661,2440875-2440902                           30   2.7  
02_05_0223 - 26943210-26944623,26944741-26945666                       29   4.7  
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851...    28   8.1  
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194...    28   8.1  
02_05_0787 - 31742685-31742702,31742703-31742744,31742993-317430...    28   8.1  
02_05_0218 + 26860319-26862448                                         28   8.1  

>06_03_0355 + 19822110-19824491
          Length = 793

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
 Frame = -3

Query: 470 FHRALCQLAGEHAAGDPNKKLVDCDI--YQSVAAGNALANMLKMGSSKPWPDAMEALTGQ 297
           + RAL Q     A+ D  +K   CD   Y  VA G  L   +K    K   +  + L   
Sbjct: 554 YRRALKQ---NRASFDEYRKKFPCDKPRYCDVAGGGGLVLSVKELEKKRLEEVQQKLAIA 610

Query: 296 REMKADGLLEYFRPLHDWLRA 234
            EM  +   E+F  L DW R+
Sbjct: 611 NEMIENFQHEWFSKLDDWARS 631


>12_01_0319 + 2440129-2440661,2440875-2440902
          Length = 186

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -2

Query: 276 PPGVLPAAPRLAAGGEPADRRAHRLGTDQHGVLHAEPIVGAKREGAGV 133
           PP    AAPRL A      R   RLG+   G ++   + GA+  GA V
Sbjct: 53  PPPRAAAAPRLGAVSLSDIRFVRRLGSGDIGSVYLAEVKGARGGGAAV 100


>02_05_0223 - 26943210-26944623,26944741-26945666
          Length = 779

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 234 RPQPVVERPEVLQEAVCLHLPLSGQRLHRVRPGLRRTHLQHVCE 365
           RP  VV++  + +EAV +       R+ R+ P LRR  ++H+CE
Sbjct: 523 RPLTVVQQEMLRREAVTI----IAHRMGRMDPPLRRECVEHLCE 562


>07_01_1005 +
           8509777-8509968,8510059-8510205,8510326-8510544,
           8510652-8510761,8511337-8511391,8511447-8511631,
           8512537-8512599,8513713-8513782,8514159-8514242,
           8515925-8516159,8516213-8516517
          Length = 554

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 583 WSRPSIELRTTSTPQPSTMCLPTSNT 506
           WS PS   R TS+P  S  C P + T
Sbjct: 495 WSPPSPHPRATSSPSTSPRCSPRAET 520


>04_03_1002 -
           21617339-21617362,21618476-21618565,21618755-21619432,
           21619536-21619772,21619849-21619896,21619995-21620045,
           21620301-21620426,21620557-21620697,21621165-21621401,
           21622467-21622571,21622812-21622982,21623306-21623380,
           21623754-21623936,21624151-21624297,21624365-21624472,
           21624605-21624709,21625109-21625213,21625322-21625381,
           21625512-21625579,21625876-21625954,21626208-21626267,
           21626445-21626498,21626834-21626886,21627405-21627494,
           21628265-21628362,21628464-21628852
          Length = 1193

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 274 SWSTSGRSTTGCGRRTSGPASTSAGNRPT 188
           S  +S  S  G GR T+ P+S+SAG RPT
Sbjct: 47  STPSSSSSAAGGGRPTT-PSSSSAGGRPT 74


>02_05_0787 -
           31742685-31742702,31742703-31742744,31742993-31743022,
           31743337-31744183,31744431-31744560,31744682-31744814
          Length = 399

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = -3

Query: 425 DPNKKLVDCDIYQSVAAGNALANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLH 249
           DP       D + ++    ALAN+ ++    PW D   A  G ++ +A    ++ + LH
Sbjct: 122 DPTTHRPRTDFFAALPQLIALANLRQLVGQLPWDDPAAAAAGLQQAEAAQAAKFGQYLH 180


>02_05_0218 + 26860319-26862448
          Length = 709

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 689 RIHPGPVPIRCVQKEDAAGRXQLPLLEAKGSSXQGVE 579
           ++HP P PIR   K  AA   Q  LL+   ++ +  E
Sbjct: 325 QLHPSPPPIRGAMKSTAAEAAQQQLLDELAAAAKATE 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,800,832
Number of Sequences: 37544
Number of extensions: 368502
Number of successful extensions: 1404
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)