Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_B11
(847 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 4e-32
SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0) 133 2e-31
SB_17710| Best HMM Match : Peptidase_M2 (HMM E-Value=8.8e-06) 74 2e-13
SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 64 2e-10
SB_53646| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_46086| Best HMM Match : RVT_1 (HMM E-Value=1.6e-20) 29 3.6
SB_20511| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_47263| Best HMM Match : Ion_trans (HMM E-Value=2.9e-37) 29 6.3
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 28 8.3
SB_6318| Best HMM Match : RVT_1 (HMM E-Value=0.72) 28 8.3
>SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1049
Score = 135 bits (327), Expect = 4e-32
Identities = 68/158 (43%), Positives = 86/158 (54%)
Frame = -3
Query: 590 QGVEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQFHRALCQLAGEHAAGDPNKK 411
QGV+PPV R E DFD AK+H+ +N Y Y+VS I+QFQFHRALC L +H
Sbjct: 807 QGVKPPVARNESDFDPGAKFHIVSNSPYIGYFVSLILQFQFHRALCNLV-KHTG-----P 860
Query: 410 LVDCDIYQSVAAGNALANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLHDWLRAE 231
L +C IYQS AG ML G S+PWP + LTG+REM AD LLEYF PL WL
Sbjct: 861 LHECSIYQSKEAGKKFKEMLAAGRSRPWPQTLFKLTGEREMSADPLLEYFAPLRKWLFNY 920
Query: 230 NQRTGEHIGWEPTNMEYCTPSQLSELNVKEPASSPATQ 117
+ +GW+ T + + SP ++
Sbjct: 921 RIKNNYTLGWKQAKKTTTTTGGVRKTLTSSTTGSPGSK 958
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 745 QXSISFIK-MGIXKXAFLPFAYTLDLFRYGVFRRKTLPEXYNCHYWKLK 602
+ SI+F+ + A LPF Y +D +R+ V + P YN +W+++
Sbjct: 755 EASINFLMTQALSHVAPLPFTYLVDQWRWKVLAGEISPSNYNSAWWRMR 803
>SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0)
Length = 663
Score = 133 bits (321), Expect = 2e-31
Identities = 68/160 (42%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Frame = -3
Query: 590 QGVEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQFHRALCQLAGEHAAGDPNKK 411
QGV PP++R E FD +K+H++AN Y +Y++S I+QFQ H+ +C +AG N+
Sbjct: 479 QGVRPPISRDETTFDPGSKFHIAANARYIQYFLSRILQFQLHKTVCDIAGI------NEP 532
Query: 410 LVDCDIYQSVAAGNALANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLHDWLRAE 231
L C IY S AG L+ ML+MG SKPW D +EA TG R+M + L EYF PL+ WL +
Sbjct: 533 LHKCSIYNSTKAGQKLSAMLEMGRSKPWRDTLEAFTGSRDMSVNPLKEYFHPLYQWLVEQ 592
Query: 230 NQRTGEHIGW---EPTNMEYCTPSQLSELNVKEPASSPAT 120
+ IGW E + + C P L EP SS T
Sbjct: 593 RCQNKYKIGWPGTEGPDYDPCEPPTF--LPPVEPTSSHHT 630
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -1
Query: 733 SFIKMGIXKXAFLPFAYTLDLFRYGVFRRKTLPEXYNCHYWKLK 602
+ +KM + K AFLPF Y L+ +R+ V+ + YN +W+L+
Sbjct: 432 ALMKMALSKIAFLPFGYLLEKWRWQVYTGEIDSSEYNKKWWELR 475
>SB_17710| Best HMM Match : Peptidase_M2 (HMM E-Value=8.8e-06)
Length = 179
Score = 73.7 bits (173), Expect = 2e-13
Identities = 33/76 (43%), Positives = 47/76 (61%)
Frame = -3
Query: 590 QGVEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQFHRALCQLAGEHAAGDPNKK 411
QGV PP++R E FD +K+H++AN Y +Y++S I+QFQ H+ +C +AG N+
Sbjct: 109 QGVRPPISRDETTFDPGSKFHIAANARYIQYFLSRILQFQLHKTVCDIAG------INEP 162
Query: 410 LVDCDIYQSVAAGNAL 363
L C IY S AG L
Sbjct: 163 LHKCSIYNSTKAGQKL 178
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -1
Query: 733 SFIKMGIXKXAFLPFAYTLDLFRYGVFRRKTLPEXYNCHYWKLK 602
+ +KM + K AFLPF Y L+ +R+ V+ + YN +W+L+
Sbjct: 62 ALMKMALSKIAFLPFGYLLEKWRWQVYTGEIDSSEYNKKWWELR 105
>SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 68.1 bits (159), Expect = 8e-12
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = -3
Query: 365 LANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTGEHIGW 201
+++ML +G SKPWP A+E +TG R+M L EYF+PL DWL+++ Q IGW
Sbjct: 500 ISDMLSLGKSKPWPLALEQMTGTRKMDVSSLKEYFKPLSDWLKSQRQEYKYTIGW 554
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = -3
Query: 590 QGVEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQFHRALCQLAG 441
QG++PPV RTE+DFD AKYH+ N Y +S + AL Q+ G
Sbjct: 472 QGIKPPVCRTENDFDPGAKYHIPGNTPYISDMLSLGKSKPWPLALEQMTG 521
Score = 42.7 bits (96), Expect = 4e-04
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -1
Query: 733 SFIKMGIXKXAFLPFAYTLDLFRYGVFRRKTLPEXYNCHYWKLK 602
+ +KM + K AFLPF + +D +R+ VF + YN +WKL+
Sbjct: 425 ALMKMALRKVAFLPFGFLIDQWRWKVFSGDITSDNYNREWWKLR 468
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 63.7 bits (148), Expect = 2e-10
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -3
Query: 365 LANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTGEHIG 204
++ MLK+G SKPWP A++A+TG EM L EYF+PL W++A+ + G IG
Sbjct: 156 ISAMLKLGKSKPWPQALKAMTGTEEMDVGPLTEYFKPLITWMKAQRAKHGYPIG 209
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = -1
Query: 733 SFIKMGIXKXAFLPFAYTLDLFRYGVFRRKTLPEXYNCHYWKLKGAAXKAWSRPSIELRT 554
+ +KM + K AFLPF + +D +R+ VFR + P+ YN +W+L+ +P + RT
Sbjct: 81 ALMKMALSKVAFLPFGFLIDQWRWRVFRGEITPQNYNRKWWELR--TKYQGIKPPV-CRT 137
Query: 553 TSTPQPSTMCLPTSNTPDIT 494
+ P +NTP I+
Sbjct: 138 ENDFDPGAKYHIPANTPYIS 157
>SB_53646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 590 QGVEPPVNRTEDDFDAAAKYHVSANVEY 507
QGV+PPV R E DFD AK+H+ +N Y
Sbjct: 46 QGVKPPVARNESDFDPGAKFHIVSNSPY 73
Score = 31.5 bits (68), Expect = 0.89
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 697 LPFAYTLDLFRYGVFRRKTLPEXYNCHYWKLK 602
LPF Y +D +R+ V + P YN +W+++
Sbjct: 11 LPFTYLVDQWRWKVLAGEISPSNYNSAWWRMR 42
>SB_46086| Best HMM Match : RVT_1 (HMM E-Value=1.6e-20)
Length = 723
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 407 VDCDIYQSVAAGNALANMLKMGSSKPWPDAMEALTGQREMK 285
V CD+Y S ++LK S+P+P + A T + +M+
Sbjct: 405 VICDLYNSSLTDGFFPSLLKSAISRPFPMSKPAKTVENDMR 445
>SB_20511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 29.1 bits (62), Expect = 4.7
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 8/113 (7%)
Frame = -3
Query: 419 NKKLVDCDIYQSVAAGNALANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLHDWL 240
N++L D D + + + + +G+ D ME + G ++ DG R L
Sbjct: 283 NRELFDMDTGKKTSQTQMIEGVNYLGNDPEPTDIMETINGPSQV-LDGTNHVLRESDHVL 341
Query: 239 RAENQ--RTGEHIGWEPTNME---YCTP---SQLSELNVKEPASSPATQQSDS 105
R R H+ + ++ Y T S LSE + PASS + SDS
Sbjct: 342 RDSKHVLRESNHVQVDSCHVAGDPYYTDRRGSDLSESSFASPASSKGSSASDS 394
>SB_47263| Best HMM Match : Ion_trans (HMM E-Value=2.9e-37)
Length = 417
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -3
Query: 644 DAAGRXQLPLLEAKGSSXQGVEPPVNRTEDDFDAAAKYHVSANVEYARYYVSFIIQFQF 468
D G L L + S+ +G ++RT D + + EYA +YVSF++ F F
Sbjct: 210 DNVGEAMLTLYTS--STGEGWPTAMHRTMDTTEKDKGPIQDYSTEYAIFYVSFVVVFSF 266
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -3
Query: 389 QSVAAGNALANMLKMGSSKPWPDAMEALTGQREMKADGLLEYFRPLHDWLRAENQRTG 216
Q +A GN+ NM K + K + R K+ GL+ H W +A +Q TG
Sbjct: 446 QRLAPGNSTRNMTKENTGKETSKTQQP-EQPRVPKSSGLITTAGLPHGWEKAVDQTTG 502
>SB_6318| Best HMM Match : RVT_1 (HMM E-Value=0.72)
Length = 485
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 410 LVDCDIYQSVAAGNALANMLKMGSSKPWPDAMEALTGQREMK 285
LV CD+Y S ++LK ++P P + A T + +++
Sbjct: 201 LVICDLYNSSLTDGFFPSLLKSAIARPLPKSKHAKTVENDVR 242
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,641,639
Number of Sequences: 59808
Number of extensions: 384611
Number of successful extensions: 1254
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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