BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_B08 (793 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 280 7e-76 At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 280 7e-76 At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 280 7e-76 At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 279 2e-75 At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 279 2e-75 At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 272 1e-73 At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 179 2e-45 At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 97 9e-21 At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 95 4e-20 At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 93 2e-19 At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 93 2e-19 At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 92 4e-19 At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 92 4e-19 At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 92 4e-19 At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 91 6e-19 At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 89 2e-18 At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 65 6e-11 At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 62 4e-10 At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.29 At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5 At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.7 At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.2 At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.2 At5g45840.1 68418.m05639 leucine-rich repeat transmembrane prote... 28 8.2 At3g26855.1 68416.m03360 hypothetical protein 28 8.2 At3g02120.1 68416.m00178 hydroxyproline-rich glycoprotein family... 28 8.2 >At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 450 Score = 280 bits (687), Expect = 7e-76 Identities = 138/219 (63%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSS-LPRR 612 PTYT + + ++SS+TASLRFDG LNVD+TEFQ NLV P H+ + + + Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV--PYPRIHFMLSSYAPVISAE 279 Query: 611 PTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKR 435 + S T+++ P ++A C RGDVVPKDVNAA+ TIKTKR Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 TIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMY Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY 399 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438 >At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) identical to tubulin alpha-2/alpha-4 chain SP|P29510 GB:P29510 from [Arabidopsis thaliana] Length = 450 Score = 280 bits (687), Expect = 7e-76 Identities = 138/219 (63%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSS-LPRR 612 PTYT + + ++SS+TASLRFDG LNVD+TEFQ NLV P H+ + + + Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV--PYPRIHFMLSSYAPVISAE 279 Query: 611 PTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKR 435 + S T+++ P ++A C RGDVVPKDVNAA+ TIKTKR Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 TIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMY Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY 399 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438 >At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) nearly identical to SP:P29510 Tubulin alpha-2/alpha-4 chain from [Arabidopsis thaliana] Length = 450 Score = 280 bits (687), Expect = 7e-76 Identities = 138/219 (63%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSS-LPRR 612 PTYT + + ++SS+TASLRFDG LNVD+TEFQ NLV P H+ + + + Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV--PYPRIHFMLSSYAPVISAE 279 Query: 611 PTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKR 435 + S T+++ P ++A C RGDVVPKDVNAA+ TIKTKR Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 TIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMY Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY 399 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + Sbjct: 400 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438 >At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 279 bits (683), Expect = 2e-75 Identities = 138/218 (63%), Positives = 155/218 (71%), Gaps = 1/218 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 PTYT + I I+SS+T SLRFDG +NVD+TEFQ NLV P S + Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKA 281 Query: 608 TMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRT 432 P P + P ++A C RGDVVPKDVNAA+ TIKTKRT Sbjct: 282 YHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRT 340 Query: 431 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 252 +QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYA Sbjct: 341 VQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYA 400 Query: 251 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + Sbjct: 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438 >At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) nearly identical to SP|P20363 Tubulin alpha-3/alpha-5 chain {Arabidopsis thaliana} Length = 450 Score = 279 bits (683), Expect = 2e-75 Identities = 138/218 (63%), Positives = 155/218 (71%), Gaps = 1/218 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 PTYT + I I+SS+T SLRFDG +NVD+TEFQ NLV P S + Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKA 281 Query: 608 TMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRT 432 P P + P ++A C RGDVVPKDVNAA+ TIKTKRT Sbjct: 282 YHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRT 340 Query: 431 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 252 +QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYA Sbjct: 341 VQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYA 400 Query: 251 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 138 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + Sbjct: 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438 >At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly identical to SP|P11139 Tubulin alpha-1 chain {Arabidopsis thaliana} Length = 450 Score = 272 bits (668), Expect = 1e-73 Identities = 135/216 (62%), Positives = 152/216 (70%), Gaps = 1/216 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 PTY+ + I +SS+T SLRFDG +NVD+TEFQ NLV P S + Sbjct: 222 PTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKA 281 Query: 608 TMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKRT 432 F P T P P ++A C RGDVVPKDVN A+A IK KRT Sbjct: 282 YHEQFSVPEITTSVFEPSNMMAKCDP-RHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRT 340 Query: 431 IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 252 IQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+ Sbjct: 341 IQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYS 400 Query: 251 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 144 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG Sbjct: 401 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436 >At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly identical to SP|P29511 Tubulin alpha-6 chain {Arabidopsis thaliana} Length = 427 Score = 179 bits (435), Expect = 2e-45 Identities = 92/167 (55%), Positives = 113/167 (67%), Gaps = 2/167 (1%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSS-LPRR 612 PTYT + + ++SS+TASLRFDG LNVD+TEFQ NLV P H+ + + + Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV--PYPRIHFMLSSYAPVISAE 279 Query: 611 PTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT-RGDVVPKDVNAAIATIKTKR 435 + S T+++ P ++A C RGDVVPKDVNAA+ TIKTKR Sbjct: 280 KAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKR 339 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 294 TIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE Sbjct: 340 TIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386 >At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis thaliana} Length = 447 Score = 97.5 bits (232), Expect = 9e-21 Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 P++ + I +S +T SLRF G LN DL + NL+ P H+ + L R Sbjct: 221 PSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 278 Query: 608 TMN--SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + S P A P A RG + K+V+ I ++ K Sbjct: 279 SQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKN 338 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ Sbjct: 339 SSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMF 390 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 391 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425 >At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis thaliana} Length = 449 Score = 95.5 bits (227), Expect = 4e-20 Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 P++ + I +S +T SLRF G LN DL + NL+ P H+ + L R Sbjct: 221 PSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 278 Query: 608 TMN--SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + S P A P A RG + K+V+ I I+ K Sbjct: 279 SQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKN 338 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + PP ++ A + N+T+I E + R+ +F M+ Sbjct: 339 SSYFVEWIPNNVKSSVCDIPPK--------GLKMAATFVGNSTSIQEMFRRVSEQFTAMF 390 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 391 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425 >At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 93.1 bits (221), Expect = 2e-19 Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 P++ + I +S +T LRF G LN DL + NL+ P H+ + L R Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 277 Query: 608 TMN--SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + S P A P A RG + K+V+ + ++ K Sbjct: 278 SQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKN 337 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ Sbjct: 338 SSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMF 389 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 >At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly identical to SP|P29512 Tubulin beta-2/beta-3 chain {Arabidopsis thaliana} Length = 450 Score = 93.1 bits (221), Expect = 2e-19 Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 P++ + I +S +T LRF G LN DL + NL+ P H+ + L R Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 277 Query: 608 TMN--SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + S P A P A RG + K+V+ + ++ K Sbjct: 278 SQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKN 337 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ Sbjct: 338 SSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMF 389 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 >At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis thaliana} Length = 444 Score = 91.9 bits (218), Expect = 4e-19 Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 PT+ + I +S +T LRF G LN DL + NL+ P H+ + L R Sbjct: 220 PTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 277 Query: 608 TM--NSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + ++ P A P A RG + K+V+ + I+ K Sbjct: 278 SQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKN 337 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + + P G ++ A + N+T+I E + R+ +F M+ Sbjct: 338 SSYFVEWIPNNVKSSVC----DIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMF 389 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424 >At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis thaliana}; supporting cDNA gi|15451225|gb|AY054693.1| Length = 449 Score = 91.9 bits (218), Expect = 4e-19 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 P++ + I +S +T LRF G LN DL + NL+ P H+ + L R Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 277 Query: 608 TMN--SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + + P A P A RG + K+V+ + ++ K Sbjct: 278 SQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKN 337 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ Sbjct: 338 SSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMF 389 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 >At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis thaliana} Length = 449 Score = 91.9 bits (218), Expect = 4e-19 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 P++ + I +S +T LRF G LN DL + NL+ P H+ + L R Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 277 Query: 608 TMN--SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + + P A P A RG + K+V+ + ++ K Sbjct: 278 SQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKN 337 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ Sbjct: 338 SSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMF 389 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 >At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis thaliana} Length = 444 Score = 91.5 bits (217), Expect = 6e-19 Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 PT+ + I +S +T LRF G LN DL + NL+ P H+ + L R Sbjct: 220 PTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 277 Query: 608 TM--NSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + ++ P A P A RG + K+V+ + ++ K Sbjct: 278 SQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKN 337 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + + P G ++ A + N+T+I E + R+ +F M+ Sbjct: 338 SSYFVEWIPNNVKSSVC----DIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMF 389 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424 >At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis thaliana} Length = 449 Score = 89.4 bits (212), Expect = 2e-18 Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 2/215 (0%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTPVSTSHWSRTRQSSLPRRP 609 P++ + I +S +T LRF G LN DL + NL+ P H+ + L R Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLI--PFPRLHFFMVGFAPLTSRG 277 Query: 608 TMN--SFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKTKR 435 + + P A P A RG + K+V+ + ++ K Sbjct: 278 SQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKN 337 Query: 434 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 255 + FV+W P K + + P G + A + N+T+I E + R+ +F M+ Sbjct: 338 SSYFVEWIPNNVKSSVC----DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMF 389 Query: 254 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 150 ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424 >At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin (TUBG2) identical to SP|P38558 Tubulin gamma-2 chain (Gamma-2 tubulin) {Arabidopsis thaliana} Length = 474 Score = 64.9 bits (151), Expect = 6e-11 Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTP----VSTSHWSRT--RQS 627 PT+ + + ++S+ T +LR+ G +N DL +L+ TP + T + T RQ+ Sbjct: 223 PTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQA 282 Query: 626 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATI 447 ++ R+ T+ QT + N A + +G+V P V+ ++ I Sbjct: 283 NVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRI 342 Query: 446 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 267 + ++ + F+DW P +V ++ + P V ++ + ML++ T+I ++R ++ Sbjct: 343 RERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIRHLFSRCLSQY 397 Query: 266 DLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 153 D + K+AF+ Y M + EF E+R+ + +L +Y+ Sbjct: 398 DKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439 >At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin (TUBG1) identical to SP|P38557 Tubulin gamma-1 chain (Gamma-1 tubulin) {Arabidopsis thaliana} Length = 474 Score = 62.1 bits (144), Expect = 4e-10 Identities = 50/222 (22%), Positives = 106/222 (47%), Gaps = 10/222 (4%) Frame = -3 Query: 788 PTYTXXDCXIGXIVSSITASLRFDGXLNVDLTEFQXNLVXTP----VSTSHWSRT--RQS 627 PT+ + + ++S+ T +LR+ G +N DL +L+ TP + T + T RQ+ Sbjct: 223 PTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQA 282 Query: 626 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATI 447 ++ R+ T+ QT + N A + +G+V P V+ ++ I Sbjct: 283 NVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRI 342 Query: 446 KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF 267 + ++ + F++W P +V ++ + P V ++ + ML++ T+I +++ ++ Sbjct: 343 RERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL-----MLASHTSIRHLFSKCLSQY 397 Query: 266 DLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 153 D + K+AF+ Y M + EF E+R+ + +L +Y+ Sbjct: 398 DKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439 >At5g33320.1 68418.m03955 triose phosphate/phosphate translocator, putative similar to SWISS-PROT:P52178 triose phosphate/phosphate translocator [Cauliflower] {Brassica oleracea} Length = 408 Score = 32.7 bits (71), Expect = 0.29 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -1 Query: 283 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 176 A ++S + +P+V+S S R WR SS P+R W Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66 >At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; Length = 698 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +3 Query: 378 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 482 LV DT+L TPVD ++ L G VH+ GY Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394 >At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1) (NR2) {Arabidopsis thaliana} Length = 917 Score = 28.7 bits (61), Expect = 4.7 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 155 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 271 R +R +PG +G+ R+ PP P R S + H +T +T Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46 >At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) Length = 587 Score = 28.3 bits (60), Expect = 6.2 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = -3 Query: 494 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 351 +G V D A T TK+ + DW P+ FK PP ++P D Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355 >At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase (MAPKK), putative (MKK4) identical to MAP kinase kinase 4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830 gi_13265419 Length = 366 Score = 28.3 bits (60), Expect = 6.2 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = +2 Query: 68 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 229 A+A + H++S P +RS +LL++P R P P L + LPPP P Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360 Query: 230 TSA 238 +S+ Sbjct: 361 SSS 363 >At5g45840.1 68418.m05639 leucine-rich repeat transmembrane protein kinase, putative and genscan+ Length = 668 Score = 27.9 bits (59), Expect = 8.2 Identities = 24/103 (23%), Positives = 40/103 (38%) Frame = -3 Query: 620 PRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTRGDVVPKDVNAAIATIKT 441 P P + P P + T AS PP ++ + WL V V + A+ Sbjct: 276 PLIPPSSPPPLPTNNTIASDPPRKFEEKSKGFKDVWLYVVIGVAAFVAMLIIVAVIFFFR 335 Query: 440 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 312 KR ++ + TG + T VP + ++++ A SN Sbjct: 336 KRAVKSIGPWKTGLSGQLQKAFVTGVPKLNRSELETACEDFSN 378 >At3g26855.1 68416.m03360 hypothetical protein Length = 163 Score = 27.9 bits (59), Expect = 8.2 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 262 SCTPSVLSCTGTSVRVWRRESSPK 191 SC P +LS + VR W +SSPK Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137 >At3g02120.1 68416.m00178 hydroxyproline-rich glycoprotein family protein Length = 126 Score = 27.9 bits (59), Expect = 8.2 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -3 Query: 692 EFQXNLVXTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 555 E Q + + TP+ T H R +S P FP S+ H S PP Sbjct: 2 ELQQSNLETPLKTQHDHRKITTSNPESSPPRPFPE-SSRKHDSPPP 46 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,397,867 Number of Sequences: 28952 Number of extensions: 377921 Number of successful extensions: 1441 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1307 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1398 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1785055200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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