Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_B01
(766 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 100 1e-21
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 100 1e-21
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 100 1e-21
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 95 4e-20
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 95 4e-20
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 69 4e-12
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 62 5e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 50 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 50 2e-06
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 50 2e-06
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 50 2e-06
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 50 2e-06
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 50 2e-06
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 50 2e-06
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 50 3e-06
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 50 3e-06
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 30 1.8
SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07) 28 7.2
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7) 28 9.5
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 100 bits (240), Expect = 1e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
IQ+LFKR SEQ MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 100 bits (240), Expect = 1e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
IQ+LFKR SEQ MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 319 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 369
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 100 bits (240), Expect = 1e-21
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
IQ+LFKR SEQ MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 374 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
IQ+LFKR EQ MFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQ
Sbjct: 139 IQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 189
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
IQ+LFKR EQ MFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQ
Sbjct: 201 IQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 251
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
IQ+LFKR MFRR+AFLHWYT EGMD +F EA++++ DL+S YQQ
Sbjct: 279 IQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESN 644
IQ+ F+R +EQ MFRR+AFLHWYT EGMD +EFTE + N
Sbjct: 193 IQEAFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -1
Query: 751 KRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
KR + Q FR + L + G + A+SN+NDL+SEYQQ
Sbjct: 231 KRNNIQNIGAFRLASALRKWGVTG----NYFSADSNLNDLISEYQQ 272
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 368 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 536 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 321 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 755 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 1164 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 800 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 349 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 817 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
Score = 49.6 bits (113), Expect = 3e-06
Identities = 18/51 (35%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
+ + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 VAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 969 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 309 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 182 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + + R + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + R + + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 182 IADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
I + R + + M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 82 IADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 46.0 bits (104), Expect = 3e-05
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = -1
Query: 721 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 614
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 766 IQKLFKRXSEQXXXMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 620
I+ F ++ +++RKA +H YT +G++ +F + +++ L+ EY
Sbjct: 421 IKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_2016| Best HMM Match : HEAT (HMM E-Value=8.6e-07)
Length = 502
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 191 NQVQPYKKKDLFPLCDSVTAPRACSAEGLASLRVAVYCNKHSRAALR 331
+++Q L LC SV+ C+ A L ++C + S A LR
Sbjct: 136 SRLQQLASLSLTDLCQSVSGDEGCAVAETAELIALMHCLESSAATLR 182
>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
Length = 282
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/32 (40%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Frame = -2
Query: 120 ES*FISYNF-FFSRSIKVFDYIPSD--NKTTL 34
+S +SYN+ FF+R+I++++ +PS+ N+ TL
Sbjct: 228 QSNILSYNYSFFARAIRIWNLLPSNVVNQVTL 259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,176,358
Number of Sequences: 59808
Number of extensions: 333246
Number of successful extensions: 889
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -