Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A24
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   1.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   4.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.5  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -3

Query: 266 EAVRLVPATLARGAAPARSVPANSGWPAPCHDVVPYPL 153
           E   L  A  A GA+P    P     PAP  D + Y +
Sbjct: 297 EEANLYAAKKAAGASPYSGTPTPMMSPAPPQDSMGYSM 334


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -3

Query: 335 CRRGKRSPNGEAPPRRRSAPQN*EAVRLVPATLARGAAPARSVPANSGWPAPCHDVVP 162
           CR+  +    ++  R  ++P   +A +  PA     AAP RSV   +G P P     P
Sbjct: 182 CRQQLQQQQNKSASRTTTSPTKVKASKASPA-----AAP-RSVATPTGIPTPSTSASP 233


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 223 RQPGRYLPTVAGPRH 179
           R P  YLP  AGPR+
Sbjct: 436 RHPFAYLPFSAGPRN 450


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 223 RQPGRYLPTVAGPRH 179
           R P  YLP  AGPR+
Sbjct: 436 RHPFAYLPFSAGPRN 450


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 81  PCSFEPSHLL*GSHFIERIYLSSP 152
           P  F PS LL  SH +    LS P
Sbjct: 28  PSMFTPSQLLMASHLMAASRLSLP 51


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 217 PGRYLPTVAGPRHATT*F 164
           PG Y+P   GPR+    F
Sbjct: 411 PGTYMPFGVGPRNCIAKF 428


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,747
Number of Sequences: 336
Number of extensions: 3728
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)