BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A24
(862 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0217 - 23693124-23693535,23693965-23694052,23694428-236945... 37 0.024
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 34 0.17
10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787 32 0.51
05_05_0133 + 22614219-22614651,22614767-22615671,22615918-226162... 32 0.68
08_02_0703 - 20188489-20190246 31 1.2
08_01_0844 - 8283858-8284409,8284883-8284963 31 1.6
07_01_0153 - 1092242-1092285,1092710-1092865,1093004-1093754 30 2.1
03_02_0091 + 5574528-5577254 30 2.1
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 30 2.7
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 30 2.7
01_05_0126 - 18391879-18391937,18392021-18392102,18392508-183926... 30 2.7
11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610 29 3.6
06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632... 29 3.6
04_03_0972 + 21347212-21347284,21347966-21348009,21348153-213482... 29 3.6
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 29 4.8
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 29 4.8
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 29 4.8
05_06_0109 - 25624241-25624290,25624648-25624687,25624959-256250... 29 4.8
01_01_0759 + 5855467-5855639,5855753-5855815,5855914-5856057,585... 29 4.8
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 29 6.3
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 29 6.3
09_04_0072 + 14323449-14324274,14324351-14324447,14325175-143252... 29 6.3
06_03_0734 - 23980576-23980671,23980799-23981338,23981493-239817... 29 6.3
06_01_0158 - 1186903-1187013,1187108-1187197,1187504-1187590,118... 29 6.3
11_02_0009 - 7315669-7315686,7316239-7316259,7316425-7316519,731... 28 8.3
02_02_0256 - 8362374-8363003 28 8.3
02_01_0592 - 4390493-4390702,4391581-4391748,4392496-4392660,439... 28 8.3
01_04_0061 + 15555096-15555428,15555768-15555775,15557117-15557495 28 8.3
01_01_0571 - 4233769-4234239,4234340-4234378,4234712-4234839,423... 28 8.3
>04_04_0217 -
23693124-23693535,23693965-23694052,23694428-23694503,
23694729-23694787,23694853-23694934,23695533-23696577,
23696700-23696998
Length = 686
Score = 36.7 bits (81), Expect = 0.024
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 184 AGQPLLAGTDRAGAAPRASVAGTRRTASQFCGADRRRGGASPLGLRFPRRQHVVVRP 354
AG L AG+ R A A+ A RR A++ CG ++ G ASP R P + +RP
Sbjct: 277 AGPELRAGSGRQHGAGAAARAQRRRAAARLCGREQPHGAASP---RLPGCRRDALRP 330
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 33.9 bits (74), Expect = 0.17
Identities = 33/124 (26%), Positives = 56/124 (45%)
Frame = -1
Query: 628 RVPRDALPLIPAGSDAATVLEQMQKSPVTVTEESGRGLTEDDRQAIARALPADGSSVTQR 449
R R L + GS + + + P + +E GRGL A + A+GSS T+R
Sbjct: 293 RPSRGELSSMERGSSSG---RSLSREPSSAVQERGRGLHRGASPPAAVRVGAEGSS-TRR 348
Query: 448 SELSDQDATPTTPVFXKCSPESHERQAEGSDQV*RRHAAVEGNAVPTARLRPGADLPHRT 269
E D + + V + +P R G+ + ++ + A+ +R+RP DL R+
Sbjct: 349 LERLDSGLS-ASMVSRRGTP----RAGRGASTP-KLSSSTDAAAMTRSRIRPNRDLTERS 402
Query: 268 ERRS 257
RR+
Sbjct: 403 LRRA 406
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = -1
Query: 592 GSDAATVLEQMQKSPVTVTEESGRGLTEDDRQAIARALPADGSSVTQRSELSDQDATPTT 413
G +++ + + P + +E GRGL A A + A+G S T+R D +
Sbjct: 161 GGGSSSSSRSLSREPSSAVQERGRGLHRGASPAAAPRVGAEGGSSTRRLGRLDSGLSVNL 220
Query: 412 PVFXKCSPESHERQAEGSDQV*RRHAAVEGNAVPTARLRPGA-DLPHRTERRS 257
+R G+ + ++ + A + +RP + + R+ RR+
Sbjct: 221 VPPPLARRHGSQRGGRGAATTTKLSSSTDVAATIRSSIRPSSREFMERSPRRA 273
>10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787
Length = 366
Score = 32.3 bits (70), Expect = 0.51
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -1
Query: 346 RRHAAVEGNAVPTARLRPGADLPHRTERRSVSCPRRWLAA-PRQPGRYLPTVAGPRH 179
RR+ G V A R P RTERR R+W+AA P G P V PR+
Sbjct: 4 RRNRGQAGVEVDAATPREETARPARTERRGRGGWRQWVAAMPPVAGGDAPPVVSPRN 60
>05_05_0133 +
22614219-22614651,22614767-22615671,22615918-22616224,
22616307-22616380
Length = 572
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -1
Query: 604 LIPAGSDAATVLEQMQKSPVTVTEESGRGLTEDDRQAIARALPADG 467
L+P G A E+M PVT+ + S GLT DD++A R P DG
Sbjct: 119 LMPVGDAAIETSEEMS-DPVTL-QYSETGLTGDDQRAKYRLPPLDG 162
>08_02_0703 - 20188489-20190246
Length = 585
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/58 (36%), Positives = 25/58 (43%)
Frame = -3
Query: 350 LTTTCCRRGKRSPNGEAPPRRRSAPQN*EAVRLVPATLARGAAPARSVPANSGWPAPC 177
+ T C R G+ P APP A + +R VPA AR A VPA S C
Sbjct: 108 IRTWCARHGRAPP---APPSAAEAREA-ALLRAVPAAAARTTTVAAMVPARSSSNLSC 161
>08_01_0844 - 8283858-8284409,8284883-8284963
Length = 210
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 181 GAGQPLLAGTDRAGAAPRASVAGTRRTASQFCGADRRRGGASPLGLRFP---RRQH 339
G G LAG + A A+VA T + CG+ R R GAS G P +R+H
Sbjct: 134 GKGAVDLAGAE-ASRRKAAAVADAAETTADGCGSSRSRDGASAAGCLPPDVGKRRH 188
>07_01_0153 - 1092242-1092285,1092710-1092865,1093004-1093754
Length = 316
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 64 GSCFRHPAPSNPHIYFEGPTSSRGYTCHHLN 156
G R P P +PH Y G CHHL+
Sbjct: 126 GDQHRFPLPPHPHAYCTGAVLCAASDCHHLD 156
>03_02_0091 + 5574528-5577254
Length = 908
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 228 AASQRRGHETDRLSVLWGRSAPGRSLAVGTAFPSTAA 338
A S+R HE RL+ L G RSLA G PS+ A
Sbjct: 110 AISRRACHERHRLAALLGECDRVRSLAAGAPRPSSGA 146
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 317 SPNGEAPPRRRSAPQN*EAVRLVPATLARGAAPARSVPANS--GWPA 183
+P APP ++ Q AT+ +G +P R+VPA S G PA
Sbjct: 93 APRQGAPPAAATSVQGAPRAPATAATVPQGGSPRRTVPAQSAPGGPA 139
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = -1
Query: 601 IPAGSDAATVLEQMQKSPVTVTEESGRGLTEDDRQAIARALPADGSSVTQRSELSDQDAT 422
I +GS+ T++E M K V E + +D+ I DG + + + ++ T
Sbjct: 66 IKSGSENGTMIENMIKEGKIVPSEEAMIKSGNDKFLI------DGFPRNEENRAAFENVT 119
Query: 421 PTTP---VFXKCSPESHERQAEGSDQ 353
TP +F CS E ER+ G +Q
Sbjct: 120 KITPAFVLFFDCSEEEMERRLLGRNQ 145
>01_05_0126 -
18391879-18391937,18392021-18392102,18392508-18392667,
18392739-18392807,18392850-18392992,18393069-18393203,
18393283-18393341,18394090-18394187,18394347-18394510,
18394586-18394647,18394803-18394977,18396331-18396588,
18396694-18396841,18398458-18398813
Length = 655
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 261 RLSVLWGRSAPGRSLAVGTAFPSTAACRRQT 353
RLS + RS+P R L V A PST R T
Sbjct: 72 RLSTIARRSSPARQLVVAVASPSTELSRSST 102
>11_01_0321 + 2415799-2415972,2418060-2418351,2418757-2419610
Length = 439
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 63 GLVLQTPCSFEPSHLL*GSHFIERIYLSSPQRVRNYVVAWRGPATVG 203
G +++ S P + G+H +ERI L P + Y WR P G
Sbjct: 199 GRLVEPLASARPWMVTQGNHEVERIPLVEPHAFKAYNARWRMPFDAG 245
>06_03_0640 - 23059473-23060489,23060592-23060651,23063163-23063283,
23063476-23065496
Length = 1072
Score = 29.5 bits (63), Expect = 3.6
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 7/144 (4%)
Frame = -1
Query: 760 PXSAVGILMTKEVGXXRGSL*XEMERRVETLXP-LSDTXYKIXXDRVPRDA--LPLIPAG 590
P S +M E+ GSL + + T+ ++D + P D L L P+
Sbjct: 706 PKSRSRAIMVTELRWKEGSLESGRQHLLRTIDSYIADERVGLVK---PADGVELYLCPSQ 762
Query: 589 SDAATVLEQM----QKSPVTVTEESGRGLTEDDRQAIARALPADGSSVTQRSELSDQDAT 422
AA +L + Q S +TVT S G+ R ++ +PA +S Q A
Sbjct: 763 GKAAQILAEHLPKEQSSSLTVTGTSAIGVVVWRRPHVSPRIPARNDGSRNQSISRKQHAV 822
Query: 421 PTTPVFXKCSPESHERQAEGSDQV 350
+ V P ++ERQ G D V
Sbjct: 823 IASAVPLSSKP-TNERQHHGQDVV 845
>04_03_0972 +
21347212-21347284,21347966-21348009,21348153-21348237,
21348810-21349358,21350291-21350416,21350772-21350936,
21351243-21351310,21351529-21351618,21351740-21351830,
21352214-21352812
Length = 629
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 263 AVRLVPATLARGAAPARSVPANSGWPA 183
A+ L+PA +A G P +VP WPA
Sbjct: 14 ALPLLPAAIAAGLLPTLAVPFGFSWPA 40
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 29.1 bits (62), Expect = 4.8
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +1
Query: 82 PAPSNPHIYFEGPT--SSRGYTCHHLNG*GTTSWHGAGQPLLAGTDRAGAAPRASVAGTR 255
PAP+ P GP Y HL G +S GA P + + + PRA+ G
Sbjct: 17 PAPA-PAPAANGPARPDRSSYVPPHLRNRGASSGGGAAAPPPSSSSSSAPPPRAA-PGLL 74
Query: 256 RTASQFCGADRRRGGASPLGLRFPRR 333
G R GG G PRR
Sbjct: 75 APRPAAAGMGRMGGGGGGGGFGGPRR 100
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 157 G*GTTSWHGAGQPLL-AGTDRAGAAPRASVAGTRRTASQFCGADRRRGGASPLGLRFPR 330
G G + G QPL A G+ P + AGTR TAS G D GG S G+ R
Sbjct: 347 GLGRSRAVGPSQPLGGAHGPHTGSDPGLTSAGTRPTASD-SGGDVPPGGGSETGIHAER 404
>06_03_0723 +
23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 118 PTSSRGYTCHHLNG*GTTSWHGAGQPLLAGTDRAGAAPRASVAGTRRTASQFCGAD 285
P + G+ H L G ++ GA L G G +PRA VA R F G+D
Sbjct: 218 PRDANGHGTHTLATAGGSAVRGAEAFGLGGGTARGGSPRARVAAYRVCYPPFNGSD 273
>05_06_0109 -
25624241-25624290,25624648-25624687,25624959-25625031,
25625123-25625200,25625533-25625569,25625892-25625952,
25626110-25626328,25626400-25626456
Length = 204
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = -1
Query: 319 AVPTARLRPGADLPHRTERRSVSCPRRWLAAPRQPGRYLPTVA 191
A P R P P R RR P WLAA +PG +LP +A
Sbjct: 2 AAPPPRRTPN---PERGSRRKGEDP--WLAASLRPGNFLPGLA 39
>01_01_0759 +
5855467-5855639,5855753-5855815,5855914-5856057,
5856146-5856920
Length = 384
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 267 SVLWGRSAPGRSLAVGTAFPSTAACRRQ 350
SVLWG+S +L + TA P+ A+ ++Q
Sbjct: 330 SVLWGKSKEHDTLTLATAMPTPASVQQQ 357
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = -1
Query: 526 GRGLTEDDRQAIARALPADGSSVTQRSELSDQDATPTTPVFXKCSPESHERQAEGSDQ 353
G + + +A +DG V R E+ Q+AT P + E E EG+++
Sbjct: 20 GGAIADTAEAGVAAEKESDGMEVEDRGEVVSQEATAVKPDEAEEPEEDPEEVGEGAEE 77
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 483 ARAIAWRSSSVKPLPDSSVTVTGDFCICSRTVAASDPAGISGSASRGTLSXCILXLVSES 662
A A+ S++ + DSS TVTG I + + AG GS+S + S L + S
Sbjct: 244 AAAVVVASAATQTDDDSSFTVTGS--IAAPSAQKQGAAGGRGSSSSSSRSLESLIMAEYS 301
Query: 663 GF 668
GF
Sbjct: 302 GF 303
>09_04_0072 + 14323449-14324274,14324351-14324447,14325175-14325277,
14325359-14325412,14325495-14325569,14325597-14325650,
14325687-14325755,14325840-14325923,14326115-14326312,
14326428-14326927,14327011-14327140,14328226-14328317,
14328776-14328954,14329114-14329316,14329398-14329499,
14330047-14330209,14330690-14330979,14331088-14331225,
14331311-14331390,14331510-14331606,14331685-14331814,
14331921-14332162
Length = 1301
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 586 DAATVLEQMQKSPVTVTEESGRGLTEDDRQAIARAL 479
+ A+VL K+ + +E GRG + D QAIA ++
Sbjct: 1114 ETASVLSSATKNSLVALDELGRGTSTSDGQAIAASV 1149
>06_03_0734 -
23980576-23980671,23980799-23981338,23981493-23981714,
23981791-23982144,23982460-23982546
Length = 432
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 441 CQTRMPHQPHRYS*SAPLKVTKGKQKEAIRSDDDMLPSRETQSQRRGS 298
C T P P S +A ++V G+ +R DD + T +Q R S
Sbjct: 163 CTTDEPRSPTTASIAASVEVQVGESLSNLRLSDDSAAAAATSAQHRSS 210
>06_01_0158 -
1186903-1187013,1187108-1187197,1187504-1187590,
1187668-1187839,1187917-1188647,1188789-1188861,
1189295-1189380,1189455-1189529,1189610-1189643,
1190331-1190622,1191073-1191439
Length = 705
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = -3
Query: 320 RSPNGEAPPRRRSA---PQN*EAVRLVPA---TLARGAAPARSVPANSGW 189
RSP G + PRR A P N +R PA + R + P R++ GW
Sbjct: 75 RSPGGSSQPRRSLADRSPGNRSELRSTPAGYPSPGRASQPRRTLENRQGW 124
>11_02_0009 -
7315669-7315686,7316239-7316259,7316425-7316519,
7317445-7317502,7317701-7317792,7318101-7318227
Length = 136
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 224 RRREPASRARDGPPLSSVGQIGAGAEPRRWDCVSLDGSMSSSDLIASF 367
+RR P GPPLS++ +GA R+ L M + D++ +F
Sbjct: 4 KRRSPLPLLSQGPPLSNLCYLGA---EFRFQRAELGAEMMTDDVVTAF 48
>02_02_0256 - 8362374-8363003
Length = 209
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2
Query: 66 APPKTLDDVSLRLSVQEKKKKK 1
APP DDV+L EKKKKK
Sbjct: 102 APPVVADDVALLAYAYEKKKKK 123
>02_01_0592 -
4390493-4390702,4391581-4391748,4392496-4392660,
4393113-4393469
Length = 299
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 266 LSSVGQIGAGAEPRRWDCVS-LDGSMSSSDLIASF 367
+S++G G G E RWDC +DG +++ + +
Sbjct: 41 VSALGGGGGGGEEERWDCFRVIDGEFPAAEEVGRY 75
>01_04_0061 + 15555096-15555428,15555768-15555775,15557117-15557495
Length = 239
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 152 STGKELRRGMARASHCWQVPTGLARRREPASRARDGPPLSSVGQIGAGAEPRRW 313
S G E RG R SH ++ G RR + RDG S G + +RW
Sbjct: 27 SRGGESSRGCGRCSHLRRIAGGRPPRRRMDTGLRDG--WRSSGSSSLRSREKRW 78
>01_01_0571 - 4233769-4234239,4234340-4234378,4234712-4234839,
4235329-4235470,4235519-4235905,4236045-4236230,
4236382-4236659,4236757-4236883,4237270-4237442,
4237610-4237657,4237734-4237767,4237837-4237965,
4238865-4238960,4239419-4239485,4240030-4240085,
4240522-4240617,4241127-4242222,4243221-4243402
Length = 1244
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 631 DRVPRDALPLIPAGSDAATVLEQMQKSPVTVTEESGRGLTEDDRQAIARAL 479
DR+ + ++ A++LE + + + +E GRG + D AIA AL
Sbjct: 1026 DRIMSGESTFLVECTETASILENATEDSLVLLDELGRGTSTFDGYAIAYAL 1076
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,987,025
Number of Sequences: 37544
Number of extensions: 543878
Number of successful extensions: 2218
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2215
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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