Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A23
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0651 + 4711369-4712431,4713069-4713763                           28   8.1  
02_02_0741 + 13590883-13591582,13591955-13592250                       28   8.1  
01_06_1261 - 35826513-35828941,35829201-35829294                       28   8.1  

>06_01_0651 + 4711369-4712431,4713069-4713763
          Length = 585

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -2

Query: 506 QGQYVPMAIEEQVAIIY-CGVRGHLDKLDPSKITAFEKE 393
           +GQ V + +   +A  Y CGV GH D L       F +E
Sbjct: 376 KGQAVALRVSADMAAAYRCGVEGHQDSLYAHSFRQFYRE 414


>02_02_0741 + 13590883-13591582,13591955-13592250
          Length = 331

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 455 CGVRGHLDKLDPSKITAF--EKEFTQHIKTSHQGLLSTIAKDGQITPESDAS 306
           CG +GH  +  P K+ A   EK+  Q + ++     ST  KDG + P S A+
Sbjct: 96  CGEQGHYVRNCPWKVFARSPEKDEKQCLGSNQAPSQSTDKKDGTLQPNSGAN 147


>01_06_1261 - 35826513-35828941,35829201-35829294
          Length = 840

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +3

Query: 423 VQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVEQLLCSGIQVRTELGKS 590
           ++L+++ ADT     DL+  S   +++ +EE   T+ S + L     +V  EL KS
Sbjct: 41  IKLIDIEADTFARKADLYFKSRPDLINHVEE---TYRSYQALADRYDRVSGELHKS 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,858,251
Number of Sequences: 37544
Number of extensions: 393984
Number of successful extensions: 1076
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)