Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A23
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 221 5e-58
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 221 5e-58
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 221 5e-58
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 29 4.1
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 29 4.1
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 29 5.4
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 29 5.4
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 221 bits (540), Expect = 5e-58
Identities = 110/158 (69%), Positives = 129/158 (81%), Gaps = 1/158 (0%)
Frame = -2
Query: 740 FLXTEXFXK-VSDQPSTSVCLIGCXSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL 564
FL TE F K V + + + SAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL
Sbjct: 352 FLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL 411
Query: 563 DAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQ 384
DA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF
Sbjct: 412 DASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLA 471
Query: 383 HIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 270
H+++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 472 HLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 509
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 221 bits (540), Expect = 5e-58
Identities = 110/158 (69%), Positives = 129/158 (81%), Gaps = 1/158 (0%)
Frame = -2
Query: 740 FLXTEXFXK-VSDQPSTSVCLIGCXSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL 564
FL TE F K V + + + SAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL
Sbjct: 344 FLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL 403
Query: 563 DAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQ 384
DA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF
Sbjct: 404 DASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLA 463
Query: 383 HIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 270
H+++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 464 HLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 501
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 221 bits (540), Expect = 5e-58
Identities = 110/158 (69%), Positives = 129/158 (81%), Gaps = 1/158 (0%)
Frame = -2
Query: 740 FLXTEXFXK-VSDQPSTSVCLIGCXSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL 564
FL TE F K V + + + SAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL
Sbjct: 379 FLETELFYKGVRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDL 438
Query: 563 DAATQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAFEKEFTQ 384
DA+TQQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT FEKEF
Sbjct: 439 DASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLA 498
Query: 383 HIKTSHQGLLSTIAKDGQITPESDASLKKIVTDFLATF 270
H+++S Q LL TI ++GQI+P++DA LK +V +FLATF
Sbjct: 499 HLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATF 536
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 583 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 479
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 583 PSSVLTWMPLHSSCSTEECVLLSSSSKDNMCPWLL 479
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 489 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 608
G L L+EE K S V + LC + R+ + K +L L
Sbjct: 649 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 688
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 489 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 608
G L L+EE K S V + LC + R+ + K +L L
Sbjct: 648 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 687
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,055,849
Number of Sequences: 27780
Number of extensions: 321821
Number of successful extensions: 1002
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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