Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A21
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82...    29   3.3  
04_01_0125 - 1317328-1318049,1318061-1319035,1320994-1321143,132...    28   7.5  
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719...    28   9.9  

>10_01_0062 -
           818396-818538,819482-819693,819936-820420,820540-820696,
           820787-820924,821127-821703,821978-822018,822679-822809
          Length = 627

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -2

Query: 235 GCVLCINWLL*ALFKATFSLVYRSREFVTETRSCVVVICYYFVSFYMLVI 86
           GC+ C    L   F  T ++ Y S   +     CV+V+ +  V+F +LV+
Sbjct: 356 GCLFCGPLFLTFCFLNTVAIAYNSTAALPFGTICVIVLIWTLVTFPLLVL 405


>04_01_0125 -
           1317328-1318049,1318061-1319035,1320994-1321143,
           1322242-1322546,1323447-1323565
          Length = 756

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 339 SHQYLLG*VVNKKKKCDFFSIFSVYYRNLVAH-DFVVVFCVLIG 211
           SH +L G V  +     F S FSV Y NL     F   FC L G
Sbjct: 620 SHNHLNGSVPVELANLSFLSFFSVAYNNLSGEIPFESQFCTLNG 663


>03_02_0296 +
           7191455-7191615,7192031-7192071,7192156-7192741,
           7193307-7193444,7193572-7193728,7193848-7194332,
           7194867-7195086
          Length = 595

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -2

Query: 235 GCVLCINWLL*ALFKATFSLVYRSREFVTETRSCVVVICYYFVSFYMLVI 86
           GC+ C    L   F  T ++ Y +   +     CV+V+ +  V+F +LV+
Sbjct: 369 GCLFCGPLFLTFCFLNTVAIAYSATAALPFGTICVIVLIWTLVTFPLLVL 418


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,863,305
Number of Sequences: 37544
Number of extensions: 244987
Number of successful extensions: 472
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)