Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A20
(822 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_9192| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 31 1.1
SB_49797| Best HMM Match : CAV_VP3 (HMM E-Value=9) 31 1.5
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 1.5
SB_53115| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 31 1.5
SB_33350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_9355| Best HMM Match : rve (HMM E-Value=4.8e-35) 31 1.5
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 30 2.0
SB_10631| Best HMM Match : 7kD_coat (HMM E-Value=1.8) 30 2.6
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 3.4
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 29 3.4
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_57636| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_48982| Best HMM Match : HEAT (HMM E-Value=0.78) 29 6.0
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 29 6.0
SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 28 8.0
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_52337| Best HMM Match : Pox_A32 (HMM E-Value=0.16) 28 8.0
SB_24570| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_24169| Best HMM Match : Pox_A32 (HMM E-Value=0.16) 28 8.0
>SB_31503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 32.3 bits (70), Expect = 0.49
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 265 RPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAGS 405
+ AD N +L NVG+L + A Q+ L ++ +DQNQ AGS
Sbjct: 207 KAADCRCSKNHQLKNVGKLDISRSAANQSKHLEKQSLQVDQNQRAGS 253
>SB_9192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 495 RSPLDLHRGGGRHVQGPGRTGVFPPP-APGSTATD--RCGKGRALP 623
+ P+D+ G H QGP G+ P P PG D +CG R +P
Sbjct: 108 KEPMDV-AGPSTHPQGPTAVGITPAPRPPGEPLPDWCKCGNCREMP 152
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +2
Query: 215 GLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIP 376
G P + P GA HPK P P +R+ S + P GPP + PG P
Sbjct: 585 GTPHPRVPPPGAPHPKVPPPGAPYQRLPYSGAYHPRL-PPPGPPYQRVPPPGAP 637
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = +2
Query: 215 GLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTS 394
G P + P GA HP+ P P R+ S V P P R PG P R
Sbjct: 525 GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVP-PPGAPH-PRVP 582
Query: 395 LPG 403
PG
Sbjct: 583 PPG 585
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +2
Query: 215 GLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTS 394
G P + P GA HP+ P P R+ V P P +R PG P R
Sbjct: 455 GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHQRVP-PPGAPH-PRVP 512
Query: 395 LPG 403
PG
Sbjct: 513 PPG 515
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = +2
Query: 215 GLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTS 394
G P + P GA HP+ P P +R+ V P P R PG P R
Sbjct: 475 GAPHPRVPPPGAPHPRVPPPGAPHQRVPPPGAPHPRVPPPGAPHPRVP-PPGAPH-PRVP 532
Query: 395 LPG 403
PG
Sbjct: 533 PPG 535
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/88 (25%), Positives = 35/88 (39%)
Frame = +2
Query: 86 GLHGVVSRPRAQGILVXXXXXXXXXXXXXXSDPLRGQNPDEVGGLPRSTLQPDGAAHPKD 265
G H VV+ P+ G +P R + ++GG P + L+P + P+D
Sbjct: 411 GSHSVVASPQRTGHTRSRFARPSSRYACEHPEPRRIASTFKIGGEP-THLEPSSSMKPQD 469
Query: 266 AQPTEPSRRIEGSETSAVSVRQPVGPPR 349
+ T R + S V+ V PR
Sbjct: 470 HERTRKPLRSPRRQLSDVATEAKVAEPR 497
>SB_49797| Best HMM Match : CAV_VP3 (HMM E-Value=9)
Length = 171
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 501 PLDLHRGGGRHVQGPGRTGVFPPP-APGSTATD--RCGKGRALP 623
P+D+ G H QGP G+ P P PG D +CG R +P
Sbjct: 28 PMDV-AGPSTHPQGPTAVGITPAPRPPGEPLPDWCKCGNCREMP 70
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 609 PFRTDPSPSSRGPEAGIRPYVPAPVRGGLPP 517
P+ + P P GP GI P P P+RGG+PP
Sbjct: 190 PWTSVPPPPPPGP-GGIPP-PPPPIRGGVPP 218
>SB_53115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 501 PLDLHRGGGRHVQGPGRTGVFPPP-APGSTATD--RCGKGRALP 623
P+D+ G H QGP G+ P P PG D +CG R +P
Sbjct: 28 PMDV-AGPSTHPQGPTAVGITPAPRPPGEPLPDWCKCGNCREMP 70
>SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 622
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDG 332
P +Q P GY G P+AP G P G
Sbjct: 429 PPQQPSYPPGGYGGPPSAPYGAPPG 453
>SB_33350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 501 PLDLHRGGGRHVQGPGRTGVFPPP-APGSTATD--RCGKGRALP 623
P+D+ G H QGP G+ P P PG D +CG R +P
Sbjct: 28 PMDV-AGPSTHSQGPTAVGITPAPRPPGEPLPDWCKCGNCREMP 70
>SB_9355| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1520
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 501 PLDLHRGGGRHVQGPGRTGVFPPP-APGSTATD--RCGKGRALP 623
P+D+ G H QGP G+ P P PG D +CG R +P
Sbjct: 155 PMDV-AGPSTHPQGPTAVGITPAPRPPGEPLPDWCKCGNCREMP 197
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 30.3 bits (65), Expect = 2.0
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +1
Query: 178 RSPPRSEPG*GRGVTAVNTTT-RRRGSPQGRPADGAFEANRRL*N-VGRLGTAARRAAQT 351
R+PP P +T T RRR + R + + RR + +GR+ T + +
Sbjct: 324 RTPPSFTPRSSISRRRSDTPTKRRRMHREHRSGERVLLSRRRPASAMGRITTKKKTPPRR 383
Query: 352 VPLVSRNTPLDQNQPAGSGRDTPSTGRSIHST 447
V L+ T PAGS R + S+ S+ ST
Sbjct: 384 VNLLEAFTAAAAGTPAGSRRSSSSSRSSLPST 415
>SB_10631| Best HMM Match : 7kD_coat (HMM E-Value=1.8)
Length = 276
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 217 VTAVNTTTRRRGSPQGRPADG-AFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQ 393
VT NTT RRR SP+ +DG F + + G+ G + + V D ++
Sbjct: 84 VTEDNTTARRR-SPKADASDGNVFNNSEHVSKAGKSGDTTKEGRSLLESVPERGS-DFDE 141
Query: 394 PAGSGRDTPSTG 429
P SGR + G
Sbjct: 142 PMASGRRSEIEG 153
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 385 GPAGYSGTPAAPSGRPDGLPYRDGRR 308
G GY G PA P GR DG+P GR+
Sbjct: 1853 GWKGYPGNPAGPPGR-DGIPGPPGRQ 1877
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 1/90 (1%)
Frame = +2
Query: 41 EVPAQKGRAGYVRLNGLHGVVSRPRAQGILVXXXXXXXXXXXXXXSDPLRGQN-PDEVGG 217
E P G A Y G+ +GI D L N PDE
Sbjct: 177 EKPVINGEAFYFCQQTSRGIAVAYLVEGIFQMIQPAEQAQESDPTPDQLVDANKPDEETS 236
Query: 218 LPRSTLQPDGAAHPKDAQPTEPSRRIEGSE 307
+P+G +P D+Q +EP+ + + SE
Sbjct: 237 QVSGKEKPEGQENPVDSQLSEPAEQAQESE 266
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 PQGRPADGAFEANRRL*NVGRLGTAARRAAQTVPLVSRNTPLDQNQPAG-SGRDTPSTG 429
P RP G EA RRL R+ A + A + V ++P G D PS G
Sbjct: 1858 PATRPHPGRVEAGRRLAKWNRINRAKKEALRVVSAQQLPVAPGPSEPQGLRSDDAPSAG 1916
>SB_57636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 382 PAGYSGTPAAPSGRPDGLPYRDGR 311
P G+SG PAAP+ PD L Y D +
Sbjct: 264 PGGHSGAPAAPAIGPDSL-YGDNK 286
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 242 DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCR 358
DG P QPT+ I+ T + P GPP C+
Sbjct: 70 DGITSPNHTQPTQVLPTIQPPPTHPYRQQGPAGPPVTCQ 108
>SB_48982| Best HMM Match : HEAT (HMM E-Value=0.78)
Length = 390
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 179 DPLRGQNPDEVGGLPRSTLQP---DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVG 340
DP++G P++ ++ L DG H D +PTE RRIE + ++R+ G
Sbjct: 317 DPVKGFLPNDEPATRKNPLYRSIFDGFDHI-DGKPTESERRIEALQAQLQALREMAG 372
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +2
Query: 194 QNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGS 304
Q P P+ + QP+ + P+ QP++P + S
Sbjct: 813 QTPQGTSAQPKPSQQPNSTSEPRPQQPSQPKSSAQAS 849
>SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 179 DPLRGQNPDEVGGLPRSTLQP---DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVG 340
DP++G P++ ++ L DG H D +PTE RRIE + ++R+ G
Sbjct: 730 DPVKGFLPNDEPATRKNPLYRSIFDGFDHI-DGKPTESERRIEALQAQLQALREMAG 785
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 406 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDG 314
P G G G G PA P G P+GLP +G
Sbjct: 239 PGNPGGPGYQGNHGNPAGPQG-PNGLPGPNG 268
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 235 TTRRRGSPQGRPADGAFEANRRL*N-VGRLGTAARRAAQTVPLVSRNTPLDQNQPAGSGR 411
T RRR + R + + RR + +GR+ T + + V L+ T PAGS R
Sbjct: 631 TKRRRMHREHRSGERVLLSRRRPASAMGRITTKKKTPPRRVNLLEAFTAAAAGTPAGSRR 690
Query: 412 DTPSTGRS 435
+ S+ RS
Sbjct: 691 RSSSSSRS 698
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 178 RSPPRSEPG*GRGVTAVNTTTRRRGSPQGRPADG 279
R PPR P GRG RG P+G P G
Sbjct: 76 RGPPRGHPMRGRGAPYGRGGPPSRGPPRGPPLPG 109
>SB_52337| Best HMM Match : Pox_A32 (HMM E-Value=0.16)
Length = 591
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 382 PAGYSGTPAAPSGRPDGLPYRDGR 311
P G+SGTPAAP+ P+ Y D +
Sbjct: 332 PGGHSGTPAAPAVGPESF-YSDNK 354
>SB_24570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 382 PAGYSGTPAAPSGRPDGLPYRDGR 311
P G+SG PAAP+ P+ L Y D +
Sbjct: 210 PGGHSGAPAAPAVNPESL-YGDNK 232
>SB_24169| Best HMM Match : Pox_A32 (HMM E-Value=0.16)
Length = 591
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 382 PAGYSGTPAAPSGRPDGLPYRDGR 311
P G+SGTPAAP+ P+ Y D +
Sbjct: 332 PGGHSGTPAAPAVGPESF-YSDNK 354
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,347,114
Number of Sequences: 59808
Number of extensions: 521531
Number of successful extensions: 1850
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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