Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A19
(859 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P03038 Cluster: Tetracycline repressor protein class A ... 144 3e-33
UniRef50_P03039 Cluster: Tetracycline repressor protein class C;... 124 3e-27
UniRef50_A6X092 Cluster: Transcriptional regulator, TetR family;... 112 1e-23
UniRef50_Q39JB6 Cluster: Transcriptional regulator, TetR family;... 101 3e-20
UniRef50_P0ACT4 Cluster: Tetracycline repressor protein class D;... 100 4e-20
UniRef50_A2VSN8 Cluster: Transcriptional regulator; n=6; Burkhol... 99 2e-19
UniRef50_P16836 Cluster: Uncharacterized protein UL126; n=1; Hum... 96 1e-18
UniRef50_Q9Z480 Cluster: Transcriptional repressor TetR; n=3; Ag... 92 1e-17
UniRef50_P21337 Cluster: Tetracycline repressor protein class E;... 82 2e-14
UniRef50_Q9X545 Cluster: Tetracycline repressor protein TetR; n=... 81 4e-14
UniRef50_A0UAI0 Cluster: Transcriptional regulator, TetR family;... 81 4e-14
UniRef50_Q9EWD6 Cluster: Putative tetR-family transcriptional re... 65 2e-09
UniRef50_Q98IT4 Cluster: Probable tetracycline repressor protein... 62 2e-08
UniRef50_Q08V54 Cluster: Tetracycline resistance regulatory prot... 55 2e-06
UniRef50_Q6ACV8 Cluster: Transcriptional regulator, TetR family;... 54 6e-06
UniRef50_Q9S1P1 Cluster: Putative transcriptional regulator; n=1... 50 6e-05
UniRef50_Q2AZI2 Cluster: Regulatory protein, TetR:Tetracyclin re... 49 1e-04
UniRef50_Q9FCM0 Cluster: Putative TetR-family transcriptional re... 48 2e-04
UniRef50_Q6A7V8 Cluster: Tetracycline repressor protein; n=1; Pr... 48 3e-04
UniRef50_A5V518 Cluster: Transcriptional regulator, TetR family;... 48 4e-04
UniRef50_Q0VNU4 Cluster: Transcriptional regulator, TetR family;... 47 7e-04
UniRef50_A1UHM0 Cluster: Transcriptional regulator, TetR family;... 46 0.001
UniRef50_Q6NGF4 Cluster: Putative tetR-family transcriptional re... 46 0.001
UniRef50_Q0SHW5 Cluster: Transcriptional regulator, TetR family ... 46 0.001
UniRef50_A6UCP6 Cluster: Transcriptional regulator, TetR family;... 44 0.005
UniRef50_Q15W43 Cluster: Transcriptional regulator, TetR family;... 43 0.009
UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR fam... 43 0.011
UniRef50_Q0RIZ3 Cluster: Putative transcriptional regulator of t... 42 0.020
UniRef50_Q8JJ38 Cluster: Map kinase-interacting kinase; n=1; Xen... 42 0.026
UniRef50_Q837P6 Cluster: Transcriptional regulator, TetR family;... 42 0.026
UniRef50_Q3WIN9 Cluster: Regulatory protein, TetR:Tetracyclin re... 42 0.026
UniRef50_A4FKH6 Cluster: TetR-family transcriptional regulator; ... 42 0.026
UniRef50_A1SM15 Cluster: Regulatory protein, TetR; n=2; Actinomy... 42 0.026
UniRef50_UPI000050FA8F Cluster: COG1309: Transcriptional regulat... 41 0.035
UniRef50_Q9X7X9 Cluster: Putative regulatory protein; n=1; Strep... 41 0.046
UniRef50_Q9FBW1 Cluster: Putative TetR-family transcriptional re... 40 0.061
UniRef50_Q18SY8 Cluster: Transcriptional regulator, TetR family;... 40 0.061
UniRef50_Q97TR9 Cluster: HTH transcriptional regulator TetR fami... 40 0.080
UniRef50_A5CM54 Cluster: Transcriptional regulator, TetR family;... 40 0.080
UniRef50_A6F9A2 Cluster: Transcriptional regulator, TetR family;... 40 0.11
UniRef50_P67434 Cluster: Uncharacterized HTH-type transcriptiona... 40 0.11
UniRef50_Q0SCI1 Cluster: Probable transcriptional regulator, Tet... 39 0.14
UniRef50_Q07W52 Cluster: Transcriptional regulator, TetR family ... 39 0.14
UniRef50_Q3Y3K2 Cluster: Regulatory protein, TetR:Tetracyclin re... 39 0.19
UniRef50_Q0AXB2 Cluster: Putative transcriptional regulator, Tet... 39 0.19
UniRef50_A4BUX2 Cluster: Transcriptional regulator, TetR family ... 39 0.19
UniRef50_Q7NVF9 Cluster: Probable transcriptional regulator, Tet... 38 0.25
UniRef50_Q6FES7 Cluster: Putative transcriptional regulator; n=2... 38 0.25
UniRef50_Q62IL2 Cluster: Transcriptional reguator, TetR family; ... 38 0.25
UniRef50_Q139L5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_Q0SJS8 Cluster: Probable tetracycline repressor protein... 38 0.25
UniRef50_Q0RTM1 Cluster: Putative regulatory protein; n=1; Frank... 38 0.25
UniRef50_Q095S5 Cluster: TetR; n=1; Stigmatella aurantiaca DW4/3... 38 0.25
UniRef50_A1G1K8 Cluster: Transcriptional regulator, TetR family;... 38 0.25
UniRef50_Q9RZ11 Cluster: Transcriptional regulator, TetR family;... 38 0.32
UniRef50_Q828S3 Cluster: Putative TetR-family transcriptional re... 38 0.32
UniRef50_Q7NZ45 Cluster: Probable transcriptional regulator, Tet... 38 0.32
UniRef50_Q2JEU1 Cluster: Transcriptional regulator, TetR family;... 38 0.32
UniRef50_Q0SA98 Cluster: Probable transcriptional regulator, Tet... 38 0.32
UniRef50_A4XB42 Cluster: Regulatory protein, TetR; n=2; Salinisp... 38 0.32
UniRef50_A4F5U4 Cluster: TetR-family transcriptional regulator; ... 38 0.32
UniRef50_Q9A3T4 Cluster: Transcriptional regulator, TetR family;... 38 0.43
UniRef50_Q5NYL8 Cluster: Transcriptional regulatory protein,TetR... 38 0.43
UniRef50_Q9RP98 Cluster: Regulatory protein; n=2; Streptomyces|R... 38 0.43
UniRef50_Q3W4K5 Cluster: Regulatory protein, TetR; n=3; Actinomy... 38 0.43
UniRef50_Q02BZ3 Cluster: Transcriptional regulator, TetR family;... 38 0.43
UniRef50_A6WGH8 Cluster: Transcriptional regulator, TetR family;... 38 0.43
UniRef50_Q88XZ4 Cluster: Transcription regulator; n=2; Lactobaci... 37 0.57
UniRef50_Q9F9H1 Cluster: PhaD; n=2; Alcanivorax borkumensis|Rep:... 37 0.57
UniRef50_Q3W877 Cluster: Regulatory protein, TetR; n=1; Frankia ... 37 0.57
UniRef50_Q0RQU0 Cluster: Putative TetR-family transcriptional re... 37 0.57
UniRef50_A7BER1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.57
UniRef50_A6W6F5 Cluster: Transcriptional regulator, TetR family;... 37 0.57
UniRef50_A4FQP9 Cluster: Transcriptional regulator, TetR family;... 37 0.57
UniRef50_A3HSQ5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.57
UniRef50_Q8UF32 Cluster: Transcriptional regulator, TetR family;... 37 0.75
UniRef50_Q5LWW7 Cluster: Transcriptional regulator, TetR family;... 37 0.75
UniRef50_Q3SGW2 Cluster: Possible Transcriptional Regulator, Tet... 37 0.75
UniRef50_A7HTC3 Cluster: Transcriptional regulator, TetR family;... 37 0.75
UniRef50_A6VUY6 Cluster: Transcriptional regulator, TetR family;... 37 0.75
UniRef50_A4BH58 Cluster: Transcriptional reguator, TetR family p... 37 0.75
UniRef50_A1SD79 Cluster: Regulatory protein, TetR; n=1; Nocardio... 37 0.75
UniRef50_Q9S250 Cluster: Putative transcriptional regulator; n=2... 36 0.99
UniRef50_Q9K017 Cluster: Transcriptional regulator, TetR family;... 36 0.99
UniRef50_Q8RER3 Cluster: Transcriptional regulator, TetR family;... 36 0.99
UniRef50_Q833A1 Cluster: Transcriptional regulator, TetR family;... 36 0.99
UniRef50_Q5YUL7 Cluster: Putative transcriptional regulator; n=1... 36 0.99
UniRef50_Q0BZH4 Cluster: Transcriptional regulator, TetR family;... 36 0.99
UniRef50_Q0BQH2 Cluster: Transcriptional regulator, TetR family;... 36 0.99
UniRef50_A6Q131 Cluster: Transcriptional regulator, TetR family;... 36 0.99
UniRef50_A5EXF6 Cluster: TetR family transcriptional regulator; ... 36 0.99
UniRef50_A4TZZ4 Cluster: Regulatory protein, TetR; n=1; Magnetos... 36 0.99
UniRef50_A4B9Z1 Cluster: Transcriptional regulator, TetR family ... 36 0.99
UniRef50_A0PL09 Cluster: Transcriptional regulator; n=4; Mycobac... 36 0.99
UniRef50_Q5WLF6 Cluster: TetR family transcriptional regulator; ... 36 1.3
UniRef50_Q48AD2 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_Q47E32 Cluster: Regulatory protein, TetR; n=1; Dechloro... 36 1.3
UniRef50_Q211C7 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_Q0M1I1 Cluster: Regulatory protein, TetR; n=1; Caulobac... 36 1.3
UniRef50_Q032V7 Cluster: Transcriptional regulator; n=3; Lactoco... 36 1.3
UniRef50_A4IL55 Cluster: Transcriptional regulator TetR family; ... 36 1.3
UniRef50_A4FFS8 Cluster: TetR-family transcriptional regulator; ... 36 1.3
UniRef50_A3VB16 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_A3Q347 Cluster: Transcriptional regulator, TetR family;... 36 1.3
UniRef50_Q9A905 Cluster: Transcriptional regulator, TetR family;... 36 1.7
UniRef50_Q8F8U7 Cluster: Transcriptional regulator, tetR family;... 36 1.7
UniRef50_Q3W8V8 Cluster: Regulatory protein, TetR:Tetracyclin re... 36 1.7
UniRef50_A4FP31 Cluster: TetR-family transcriptional regulator; ... 36 1.7
UniRef50_A4FLS1 Cluster: TetR-family transcriptional regulator; ... 36 1.7
UniRef50_A4BJD7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_A3PUZ9 Cluster: Transcriptional regulator, TetR family;... 36 1.7
UniRef50_A7I8M3 Cluster: Transcriptional regulator, TetR family;... 36 1.7
UniRef50_Q8E8I9 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q5HKI3 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q5E8J6 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q393R5 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q30RP7 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_Q2SD10 Cluster: Transcriptional regulator; n=1; Hahella... 35 2.3
UniRef50_Q1N3H1 Cluster: Transcription regulator, TetR family pr... 35 2.3
UniRef50_Q0G3G6 Cluster: Transcriptional regulator (TetR/AcrR fa... 35 2.3
UniRef50_Q032X3 Cluster: Transcriptional regulator; n=3; Lactoco... 35 2.3
UniRef50_A6Q5T5 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_A6M2H0 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_A6GE02 Cluster: Transcriptional regulator, TetR family ... 35 2.3
UniRef50_A4Y017 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_A1B786 Cluster: Transcriptional regulator, TetR family;... 35 2.3
UniRef50_UPI000038D50F Cluster: COG1309: Transcriptional regulat... 35 3.0
UniRef50_Q9RWE9 Cluster: Transcriptional regulator, TetR family;... 35 3.0
UniRef50_Q9KV25 Cluster: Transcriptional reguator, TetR family; ... 35 3.0
UniRef50_Q7P0X9 Cluster: Acrab operon repressor; n=1; Chromobact... 35 3.0
UniRef50_Q5SJJ9 Cluster: Putative uncharacterized protein TTHA10... 35 3.0
UniRef50_Q47YV3 Cluster: Transcriptional regulator, TetR family;... 35 3.0
UniRef50_Q9ZGB7 Cluster: LanK; n=2; Streptomyces|Rep: LanK - Str... 35 3.0
UniRef50_Q7WSR2 Cluster: Putative transcriptional regulator; n=2... 35 3.0
UniRef50_Q3W8J2 Cluster: Regulatory protein, TetR; n=1; Frankia ... 35 3.0
UniRef50_Q025G7 Cluster: Transcriptional regulator, TetR family;... 35 3.0
UniRef50_A6W9W2 Cluster: Transcriptional regulator, TetR family;... 35 3.0
UniRef50_A6Q9F4 Cluster: Transcriptional regulator, TetR family;... 35 3.0
UniRef50_A4FLG0 Cluster: TetR-family transcriptional regulator; ... 35 3.0
UniRef50_A1ZRG6 Cluster: Transcriptional regulator, TetR family;... 35 3.0
UniRef50_A0W7D7 Cluster: Transcriptional regulator, TetR family;... 35 3.0
UniRef50_A0R315 Cluster: TetR-family protein transcriptional reg... 35 3.0
UniRef50_Q9KFW7 Cluster: BH0353 protein; n=1; Bacillus haloduran... 34 4.0
UniRef50_Q9CFG3 Cluster: Transcriptional regulator; n=4; Lactoco... 34 4.0
UniRef50_Q98GZ7 Cluster: Transcriptional regulator; n=1; Mesorhi... 34 4.0
UniRef50_Q928H4 Cluster: Lin2558 protein; n=13; Listeria|Rep: Li... 34 4.0
UniRef50_Q82R52 Cluster: Putative TetR-family transcriptional re... 34 4.0
UniRef50_Q6D8M2 Cluster: TetR-family transcriptional regulator; ... 34 4.0
UniRef50_Q5YZE8 Cluster: Putative transcriptional regulator; n=2... 34 4.0
UniRef50_Q5WJH4 Cluster: Transcriptional regulator; n=1; Bacillu... 34 4.0
UniRef50_Q2RT73 Cluster: Transcriptional Regulator, TetR family;... 34 4.0
UniRef50_Q9AJL5 Cluster: VarR; n=2; Actinomycetales|Rep: VarR - ... 34 4.0
UniRef50_Q0S1A2 Cluster: Transcriptional regulator, MalT family ... 34 4.0
UniRef50_A6G877 Cluster: Transcriptional regulatory protein; n=1... 34 4.0
UniRef50_A6F2N8 Cluster: Transcriptional regulator; n=1; Marinob... 34 4.0
UniRef50_A5V191 Cluster: Transcriptional regulator, TetR family;... 34 4.0
UniRef50_A3V9K2 Cluster: Possible Transcriptional Regulator, Tet... 34 4.0
UniRef50_A3TS77 Cluster: Putative transcriptional regulator; n=1... 34 4.0
UniRef50_A3I766 Cluster: Transcriptional regulator, TetR family ... 34 4.0
UniRef50_A1U6A9 Cluster: Transcriptional regulator, TetR family;... 34 4.0
UniRef50_A1G4K2 Cluster: Transcriptional regulator, TetR family;... 34 4.0
UniRef50_Q88ZN5 Cluster: Transcription regulator; n=1; Lactobaci... 34 5.3
UniRef50_Q81U36 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_Q74GP1 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_Q6N722 Cluster: Possible transcriptional regulator, Tet... 34 5.3
UniRef50_Q6LR00 Cluster: Hypothetical transcriptional regulator;... 34 5.3
UniRef50_Q7D614 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_Q1MXX0 Cluster: Putative transcriptional regulator; n=1... 34 5.3
UniRef50_Q0LEE0 Cluster: Regulatory protein, TetR; n=1; Herpetos... 34 5.3
UniRef50_Q03ZI0 Cluster: Transcriptional regulator; n=1; Leucono... 34 5.3
UniRef50_A6W9T1 Cluster: Regulatory protein TetR; n=3; Actinomyc... 34 5.3
UniRef50_A6UEY8 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_A6Q3N1 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_A6P7Z6 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_A6CWX3 Cluster: Transcriptional regulator, TetR family ... 34 5.3
UniRef50_A5VLL5 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_A3Y7R2 Cluster: Regulatory protein, TetR; n=1; Marinomo... 34 5.3
UniRef50_A1T5J2 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_A1SNW1 Cluster: Regulatory protein, TetR; n=1; Nocardio... 34 5.3
UniRef50_A1IEJ9 Cluster: Putative transcriptional regulator, Tet... 34 5.3
UniRef50_A1ICN4 Cluster: Putative transcriptional regulator, Tet... 34 5.3
UniRef50_A1BCK3 Cluster: Transcriptional regulator, TetR family;... 34 5.3
UniRef50_A0W7Y5 Cluster: Transcriptional regulator, TetR family ... 34 5.3
UniRef50_A0H3B4 Cluster: Regulatory protein, TetR; n=2; Chlorofl... 34 5.3
UniRef50_P0ACT1 Cluster: HTH-type transcriptional regulator acrR... 34 5.3
UniRef50_Q9RSH6 Cluster: Transcriptional regulator, TetR family;... 33 7.0
UniRef50_Q92DG8 Cluster: Lin0845 protein; n=13; Listeria|Rep: Li... 33 7.0
UniRef50_Q89SZ6 Cluster: Transcriptional regulatory protein; n=1... 33 7.0
UniRef50_Q82QS4 Cluster: Putative TetR-family transcriptional re... 33 7.0
UniRef50_Q5R0R8 Cluster: Enzyme related to eukaryotic diacylglyc... 33 7.0
UniRef50_Q39GC4 Cluster: Transcriptional regulator, TetR family;... 33 7.0
UniRef50_Q38Z06 Cluster: Putative transcriptional regulator, Tet... 33 7.0
UniRef50_Q2SA74 Cluster: Transcriptional regulator; n=1; Hahella... 33 7.0
UniRef50_Q2S144 Cluster: Hypothetical transcriptional regulator,... 33 7.0
UniRef50_Q2GA94 Cluster: Transcriptional regulator, TetR family;... 33 7.0
UniRef50_Q21L53 Cluster: Regulatory protein, TetR; n=1; Saccharo... 33 7.0
UniRef50_Q0RKT9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_A6W686 Cluster: Transcriptional regulator, TetR family;... 33 7.0
UniRef50_A5I3Y4 Cluster: TetR-family regulatory protein; n=3; Cl... 33 7.0
UniRef50_A3J8M4 Cluster: Transcriptional regulator; n=4; Gammapr... 33 7.0
UniRef50_A1GBH9 Cluster: Transcriptional regulator, TetR family ... 33 7.0
UniRef50_A0LGB1 Cluster: Transcriptional regulator, TetR family ... 33 7.0
UniRef50_A0JS18 Cluster: Transcriptional regulator, TetR family;... 33 7.0
UniRef50_Q8TLS7 Cluster: Transcriptional regulator, TetR family;... 33 7.0
UniRef50_P39897 Cluster: HTH-type transcriptional regulator mtrR... 33 7.0
UniRef50_UPI0000510166 Cluster: COG1309: Transcriptional regulat... 33 9.2
UniRef50_Q9KBG3 Cluster: Transcriptional regulator; n=1; Bacillu... 33 9.2
UniRef50_Q9A771 Cluster: Transcriptional regulator, TetR family;... 33 9.2
UniRef50_Q6D8M6 Cluster: TetR-family transcriptional regulator; ... 33 9.2
UniRef50_Q3BMD8 Cluster: Transcriptional regulator, TetR family;... 33 9.2
UniRef50_Q39ZX6 Cluster: TetR family transcriptional regulator; ... 33 9.2
UniRef50_Q3W3C5 Cluster: Regulatory protein, TetR; n=1; Frankia ... 33 9.2
UniRef50_Q1MYE0 Cluster: Transcriptional regulator; n=1; Oceanob... 33 9.2
UniRef50_Q0RMZ4 Cluster: Putative TetR-family transcriptional re... 33 9.2
UniRef50_A7CCD1 Cluster: Transcriptional regulator, TetR family;... 33 9.2
UniRef50_A7B9X0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_A6W488 Cluster: Transcriptional regulator, TetR family;... 33 9.2
UniRef50_A6ULL0 Cluster: Transcriptional regulator, TetR family;... 33 9.2
UniRef50_A6G672 Cluster: Transcriptional regulatory protein; n=1... 33 9.2
UniRef50_A3YF17 Cluster: Putative transcriptional regulator; n=1... 33 9.2
UniRef50_A3HWG2 Cluster: Transcriptional regulator, TetR family ... 33 9.2
UniRef50_A1ZGE6 Cluster: Transcriptional regulator, TetR family ... 33 9.2
UniRef50_A0VBN2 Cluster: Transcriptional regulator, TetR family;... 33 9.2
UniRef50_Q9AIU0 Cluster: HTH-type transcriptional regulator ttgR... 33 9.2
UniRef50_Q9KVD2 Cluster: HTH-type protein slmA; n=72; Gammaprote... 33 9.2
>UniRef50_P03038 Cluster: Tetracycline repressor protein class A
from transposon 1721; n=64; root|Rep: Tetracycline
repressor protein class A from transposon 1721 -
Escherichia coli
Length = 216
Score = 144 bits (348), Expect = 3e-33
Identities = 69/81 (85%), Positives = 69/81 (85%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR ENHTHSVPRADD
Sbjct: 14 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRALLDALAEAMLAENHTHSVPRADD 73
Query: 170 DWRSFLIGNARSFRQALLAYR 108
DWRSFLIGNARSFRQALLAYR
Sbjct: 74 DWRSFLIGNARSFRQALLAYR 94
>UniRef50_P03039 Cluster: Tetracycline repressor protein class C;
n=10; root|Rep: Tetracycline repressor protein class C -
Escherichia coli
Length = 219
Score = 124 bits (299), Expect = 3e-27
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L+LLN+VG++GLTTR+LAERLGVQQPALYWHF+NKR NHTHS PR DD
Sbjct: 14 LELLNDVGMEGLTTRRLAERLGVQQPALYWHFKNKRALLDALAEAMLTINHTHSTPRDDD 73
Query: 170 DWRSFLIGNARSFRQALLAYR 108
DWRSFL GNA SFR+ALLAYR
Sbjct: 74 DWRSFLKGNACSFRRALLAYR 94
>UniRef50_A6X092 Cluster: Transcriptional regulator, TetR family;
n=1; Ochrobactrum anthropi ATCC 49188|Rep:
Transcriptional regulator, TetR family - Ochrobactrum
anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)
Length = 206
Score = 112 bits (269), Expect = 1e-23
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L+LLNEVG +GLTTR+LAERLGVQQPALYWHF+NKR E+H H++PRA +
Sbjct: 18 LELLNEVGEEGLTTRRLAERLGVQQPALYWHFKNKRVLLDALAETILAEHHDHALPRAGE 77
Query: 170 DWRSFLIGNARSFRQALLAYR 108
+WR FLI NA SFR+ALL YR
Sbjct: 78 NWRHFLIENAHSFRRALLTYR 98
>UniRef50_Q39JB6 Cluster: Transcriptional regulator, TetR family;
n=3; Proteobacteria|Rep: Transcriptional regulator, TetR
family - Burkholderia sp. (strain 383) (Burkholderia
cepacia (strain ATCC 17760/ NCIB 9086 / R18194))
Length = 210
Score = 101 bits (241), Expect = 3e-20
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L+LL+EVG+DGL+TRKLAERLGVQ P LYWHFRNK E H S+PR +
Sbjct: 18 LELLDEVGIDGLSTRKLAERLGVQSPTLYWHFRNKGELLDAMAEAIMLERHDASLPRPGE 77
Query: 170 DWRSFLIGNARSFRQALLAYR 108
W ++L+ NARSFR+ALLAYR
Sbjct: 78 AWDAWLLDNARSFRRALLAYR 98
>UniRef50_P0ACT4 Cluster: Tetracycline repressor protein class D;
n=10; Gammaproteobacteria|Rep: Tetracycline repressor
protein class D - Escherichia coli
Length = 218
Score = 100 bits (240), Expect = 4e-20
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L+LLNE G+DGLTTRKLA++LG++QP LYWH +NKR +H +S+P A +
Sbjct: 14 LELLNETGIDGLTTRKLAQKLGIEQPTLYWHVKNKRALLDALAVEILARHHDYSLPAAGE 73
Query: 170 DWRSFLIGNARSFRQALLAYR 108
W+SFL NA SFR+ALL YR
Sbjct: 74 SWQSFLRNNAMSFRRALLRYR 94
>UniRef50_A2VSN8 Cluster: Transcriptional regulator; n=6;
Burkholderia cepacia complex|Rep: Transcriptional
regulator - Burkholderia cenocepacia PC184
Length = 213
Score = 98.7 bits (235), Expect = 2e-19
Identities = 48/81 (59%), Positives = 56/81 (69%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L+LL+EVG+DGL+TR+LAERLGVQ P LYWHFRNK E H S+PR D
Sbjct: 21 LNLLDEVGIDGLSTRRLAERLGVQSPTLYWHFRNKAELLDAMAEAIMLERHGESLPRPGD 80
Query: 170 DWRSFLIGNARSFRQALLAYR 108
W +L NARSFR+ALLAYR
Sbjct: 81 VWDVWLAENARSFRRALLAYR 101
>UniRef50_P16836 Cluster: Uncharacterized protein UL126; n=1; Human
herpesvirus 5 strain AD169|Rep: Uncharacterized protein
UL126 - Human cytomegalovirus (strain AD169) (HHV-5)
(Human herpesvirus 5)
Length = 134
Score = 95.9 bits (228), Expect = 1e-18
Identities = 47/66 (71%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = -1
Query: 847 GXPSXHPHDVNGVCXAPKSTGLF-QMSYNSAPLTQMXGRRVRWEVYISRARLVNRQIAWR 671
G PS HP DVNG ++ F + NSAPLTQM GRRVRWEVYISRARLVNRQIAWR
Sbjct: 6 GFPSLHPIDVNGSLFWHQNQRDFPKCRNNSAPLTQMGGRRVRWEVYISRARLVNRQIAWR 65
Query: 670 RHPRCF 653
RHPRCF
Sbjct: 66 RHPRCF 71
>UniRef50_Q9Z480 Cluster: Transcriptional repressor TetR; n=3;
Agrobacterium tumefaciens|Rep: Transcriptional repressor
TetR - Agrobacterium tumefaciens
Length = 215
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/81 (54%), Positives = 51/81 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L LLNEVG+D L+TRKLAERLGVQQPALYWHFRNK H +P+
Sbjct: 13 LRLLNEVGIDKLSTRKLAERLGVQQPALYWHFRNKAELLDAINSEMLLRYHCDRLPKPGQ 72
Query: 170 DWRSFLIGNARSFRQALLAYR 108
DW +F + NARS R+ LL R
Sbjct: 73 DWITFTLANARSIRKTLLTVR 93
>UniRef50_P21337 Cluster: Tetracycline repressor protein class E;
n=4; Gammaproteobacteria|Rep: Tetracycline repressor
protein class E - Escherichia coli
Length = 211
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L LL+ G++GLTTRKLA+ L ++QP LYWH RNK+ ++HT S P +
Sbjct: 14 LTLLDSEGLEGLTTRKLAQSLKIEQPTLYWHVRNKQTLMNMLSEAILAKHHTRSAPLPTE 73
Query: 170 DWRSFLIGNARSFRQALLAYR 108
W+ FL NA SFR+ALL +R
Sbjct: 74 SWQQFLQENALSFRKALLVHR 94
>UniRef50_Q9X545 Cluster: Tetracycline repressor protein TetR; n=4;
Actinomycetales|Rep: Tetracycline repressor protein TetR
- Corynebacterium glutamicum (Brevibacterium flavum)
Length = 199
Score = 81.0 bits (191), Expect = 4e-14
Identities = 39/79 (49%), Positives = 46/79 (58%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADDDW 165
+L+E G+DG TTR LA L VQQP LYWHFR K H S P +D+ W
Sbjct: 20 VLDETGLDGFTTRALAAHLQVQQPGLYWHFRTKAELLAALASDVLDREHHASFPESDEKW 79
Query: 164 RSFLIGNARSFRQALLAYR 108
+FL+ NARSFR AL A R
Sbjct: 80 DAFLLRNARSFRHALHAVR 98
>UniRef50_A0UAI0 Cluster: Transcriptional regulator, TetR family;
n=2; Bacteria|Rep: Transcriptional regulator, TetR
family - Burkholderia cenocepacia MC0-3
Length = 203
Score = 81.0 bits (191), Expect = 4e-14
Identities = 39/81 (48%), Positives = 51/81 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L LL+E G+D LTTR+LA+RLGV+ ALYWH+R+K +HT VP
Sbjct: 14 LALLDEQGLDALTTRRLAQRLGVESAALYWHYRDKSVLLAEMAAVALARHHTLDVPADTA 73
Query: 170 DWRSFLIGNARSFRQALLAYR 108
W ++ NARSFR+ALLA+R
Sbjct: 74 QWDAWFADNARSFRRALLAHR 94
>UniRef50_Q9EWD6 Cluster: Putative tetR-family transcriptional
regulator; n=2; Streptomyces|Rep: Putative tetR-family
transcriptional regulator - Streptomyces coelicolor
Length = 216
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/81 (43%), Positives = 43/81 (53%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L LLNEVG+DGLT R +A L V+ PALYWHF++K+ + D
Sbjct: 19 LKLLNEVGLDGLTLRAIARELDVKAPALYWHFKDKQALLDEMATEMYRRMIAGTPLDPAD 78
Query: 170 DWRSFLIGNARSFRQALLAYR 108
WR L+ R R ALLAYR
Sbjct: 79 TWRERLLTANRGLRAALLAYR 99
>UniRef50_Q98IT4 Cluster: Probable tetracycline repressor protein;
n=1; Mesorhizobium loti|Rep: Probable tetracycline
repressor protein - Rhizobium loti (Mesorhizobium loti)
Length = 231
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L LL EVG++GLT R+LA+ L VQ P LYWH ++K+ + PR +
Sbjct: 19 LGLLGEVGLEGLTVRRLAKELDVQNPTLYWHIKDKQALVDEMADALLAA--WYRPPRREV 76
Query: 170 DWRSFLIGNARSFRQALLAYR 108
W+ +L + R FR+A+L+ R
Sbjct: 77 SWQVWLRSSCRRFREAMLSCR 97
>UniRef50_Q08V54 Cluster: Tetracycline resistance regulatory protein
TetR; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
Tetracycline resistance regulatory protein TetR -
Stigmatella aurantiaca DW4/3-1
Length = 209
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L LL+E GV+GLT RKLA++L +Q P+LYWHF NK+
Sbjct: 13 LALLDEGGVEGLTMRKLAQKLNIQAPSLYWHFANKQ 48
>UniRef50_Q6ACV8 Cluster: Transcriptional regulator, TetR family;
n=2; Microbacteriaceae|Rep: Transcriptional regulator,
TetR family - Leifsonia xyli subsp. xyli
Length = 203
Score = 53.6 bits (123), Expect = 6e-06
Identities = 30/81 (37%), Positives = 40/81 (49%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L +L++VG+ LT R+LA L VQ ALYWHF NK+ + T P
Sbjct: 20 LRILDDVGLPDLTMRRLAAALDVQPSALYWHFPNKQTLLAELADRIVARSATPVRPEPPG 79
Query: 170 DWRSFLIGNARSFRQALLAYR 108
W + + A R+ALLA R
Sbjct: 80 SWTNAVRAEADRLREALLACR 100
>UniRef50_Q9S1P1 Cluster: Putative transcriptional regulator; n=1;
Streptomyces coelicolor|Rep: Putative transcriptional
regulator - Streptomyces coelicolor
Length = 221
Score = 50.4 bits (115), Expect = 6e-05
Identities = 31/81 (38%), Positives = 40/81 (49%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
LDLLNE G+D LT R+LA+ + VQ ALY +F K+ + D
Sbjct: 25 LDLLNESGLDTLTMRRLAQAMDVQAGALYRYFAAKQDLLTAMAEHMVDGVADAAGATGDG 84
Query: 170 DWRSFLIGNARSFRQALLAYR 108
DW AR+ R ALLA+R
Sbjct: 85 DWSERTARLARALRAALLAHR 105
>UniRef50_Q2AZI2 Cluster: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal; n=1; Bacillus weihenstephanensis
KBAB4|Rep: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal - Bacillus weihenstephanensis
KBAB4
Length = 238
Score = 49.2 bits (112), Expect = 1e-04
Identities = 18/35 (51%), Positives = 30/35 (85%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
+LL E G++ L+ R+LA+RLG+Q P+LYW+F++K+
Sbjct: 25 ELLGEEGIEKLSMRRLADRLGIQAPSLYWYFKSKQ 59
>UniRef50_Q9FCM0 Cluster: Putative TetR-family transcriptional
regulator; n=1; Streptomyces coelicolor|Rep: Putative
TetR-family transcriptional regulator - Streptomyces
coelicolor
Length = 212
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L+LL++ G+D LT R LA RL V+ ALYWH RNK+
Sbjct: 15 LELLDDQGMDALTVRTLASRLDVRPSALYWHVRNKQ 50
>UniRef50_Q6A7V8 Cluster: Tetracycline repressor protein; n=1;
Propionibacterium acnes|Rep: Tetracycline repressor
protein - Propionibacterium acnes
Length = 203
Score = 48.0 bits (109), Expect = 3e-04
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXEN-HTHSVPRAD 174
+++L+ G+ L+ R+LAERLGV+ ALYWH NK+ + +VP D
Sbjct: 28 VEILDAYGLGDLSMRRLAERLGVKAGALYWHVANKQSLLAAVSDEILAVDGGPTTVPSQD 87
Query: 173 DDWRSFLIGNARSFRQALLAYR 108
+ + AR FR LLA+R
Sbjct: 88 AELSDGVDEWARCFRATLLAHR 109
>UniRef50_A5V518 Cluster: Transcriptional regulator, TetR family;
n=1; Sphingomonas wittichii RW1|Rep: Transcriptional
regulator, TetR family - Sphingomonas wittichii RW1
Length = 216
Score = 47.6 bits (108), Expect = 4e-04
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L +++E G+D L+ R+L + L V+ +LY HFR+K + T ++
Sbjct: 19 LRIIDEEGLDALSIRRLGDELNVRGISLYHHFRSKEHILAGACELALADVRTPHT--SNT 76
Query: 170 DWRSFLIGNARSFRQALLAY 111
DWR +L+ NAR + AL A+
Sbjct: 77 DWREWLVDNARKYYLALRAH 96
>UniRef50_Q0VNU4 Cluster: Transcriptional regulator, TetR family;
n=1; Alcanivorax borkumensis SK2|Rep: Transcriptional
regulator, TetR family - Alcanivorax borkumensis (strain
SK2 / ATCC 700651 / DSM 11573)
Length = 197
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LLNE G++GL+ RKLAER GV + A Y HFR+K
Sbjct: 23 LLNEQGIEGLSLRKLAERAGVSRTAPYHHFRDK 55
>UniRef50_A1UHM0 Cluster: Transcriptional regulator, TetR family;
n=5; Mycobacterium|Rep: Transcriptional regulator, TetR
family - Mycobacterium sp. (strain KMS)
Length = 192
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADDDW 165
+L+ G+ LT R+LA L V ALYWHF NK+ +P A+ DW
Sbjct: 15 ILDSHGIADLTMRRLARELNVSPGALYWHFANKQ--QLLGAIADRILTPARGLP-AEADW 71
Query: 164 RSFLIGNARSFRQALLAY 111
R ++ + R ALL++
Sbjct: 72 RDRIVAVCSALRDALLSH 89
>UniRef50_Q6NGF4 Cluster: Putative tetR-family transcriptional
regulator; n=1; Corynebacterium diphtheriae|Rep:
Putative tetR-family transcriptional regulator -
Corynebacterium diphtheriae
Length = 181
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
LD+L+ G+ +T R+LA LGV ALYWHF+NK+
Sbjct: 13 LDILDSYGLADMTMRRLATHLGVAPGALYWHFKNKQ 48
>UniRef50_Q0SHW5 Cluster: Transcriptional regulator, TetR family
protein; n=3; Corynebacterineae|Rep: Transcriptional
regulator, TetR family protein - Rhodococcus sp. (strain
RHA1)
Length = 234
Score = 46.0 bits (104), Expect = 0.001
Identities = 31/92 (33%), Positives = 41/92 (44%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADDDW 165
+L+E G+ LT R+LA LGVQ ALYWHF NK+ P W
Sbjct: 40 ILDEFGLADLTMRRLATALGVQPGALYWHFPNKQTLLGALADKIL---EDVDAPVTAPGW 96
Query: 164 RSFLIGNARSFRQALLAYRQHNGTMCSSCRSR 69
+ A R ALLA+R + ++ SR
Sbjct: 97 DAEFTELAHRLRTALLAHRDGAELVSATYASR 128
>UniRef50_A6UCP6 Cluster: Transcriptional regulator, TetR family;
n=4; Rhizobiaceae|Rep: Transcriptional regulator, TetR
family - Sinorhizobium medicae WSM419
Length = 257
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++LL+ GVDGL R+LA+RLG +LYWH NK
Sbjct: 67 VELLDTRGVDGLKMRQLADRLGAGAMSLYWHVENK 101
>UniRef50_Q15W43 Cluster: Transcriptional regulator, TetR family;
n=4; Gammaproteobacteria|Rep: Transcriptional regulator,
TetR family - Pseudoalteromonas atlantica (strain T6c /
BAA-1087)
Length = 208
Score = 43.2 bits (97), Expect = 0.009
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADDDW 165
+L+E G++GL+ RKLA+R+GV + A Y HF++K +H HS A+
Sbjct: 31 MLSESGIEGLSLRKLADRVGVSRTAPYHHFKDKN--ELLCAIAQEGFDHWHS--NAERIL 86
Query: 164 RSFLIGNA---RSFRQALLAYRQHNGTMCSSCRSRPL---*SIPRGAQAYAYPAFXVQ 9
I N F Q+ + Y N M R + S + +A AYP+F Q
Sbjct: 87 TQTDISNREKYHQFFQSYIGYAAENPEMYDLMFGRTIWKQNSATKDLRAIAYPSFQRQ 144
>UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR
family; n=4; Corynebacterium|Rep: Bacterial regulatory
proteins, tetR family - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 191
Score = 42.7 bits (96), Expect = 0.011
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
+ +L+E G+ +T R++A++L V ALYWHF+NK+
Sbjct: 17 VSILSEFGLSDMTMRRVAKQLNVAPGALYWHFKNKQ 52
>UniRef50_Q0RIZ3 Cluster: Putative transcriptional regulator of the
TetR family; n=1; Frankia alni ACN14a|Rep: Putative
transcriptional regulator of the TetR family - Frankia
alni (strain ACN14a)
Length = 233
Score = 41.9 bits (94), Expect = 0.020
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRAD-DD 168
L E G+ +T RK+A LGVQ PA+++HF +R ++P D DD
Sbjct: 24 LAAEAGLAEVTIRKVAAVLGVQHPAVHYHF-PRRHDLVDALLGRAVRRFNEALPVIDSDD 82
Query: 167 WRSFLIGNARSFRQAL 120
W + L G +R AL
Sbjct: 83 WETHLRGYWEGYRAAL 98
>UniRef50_Q8JJ38 Cluster: Map kinase-interacting kinase; n=1;
Xenopus laevis|Rep: Map kinase-interacting kinase -
Xenopus laevis (African clawed frog)
Length = 534
Score = 41.5 bits (93), Expect = 0.026
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -3
Query: 761 RPIDANGR*ACTVGGLYKQSSFSEP 687
R ID NGR AC +GGLYKQ SF EP
Sbjct: 121 RSIDVNGRXACLMGGLYKQCSFREP 145
>UniRef50_Q837P6 Cluster: Transcriptional regulator, TetR family;
n=1; Enterococcus faecalis|Rep: Transcriptional
regulator, TetR family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 220
Score = 41.5 bits (93), Expect = 0.026
Identities = 15/28 (53%), Positives = 25/28 (89%)
Frame = -3
Query: 326 VDGLTTRKLAERLGVQQPALYWHFRNKR 243
++ L+ RK+A++LGVQ PA+YW+F+NK+
Sbjct: 24 LEQLSMRKVAKQLGVQAPAIYWYFKNKQ 51
>UniRef50_Q3WIN9 Cluster: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal; n=1; Frankia sp. EAN1pec|Rep:
Regulatory protein, TetR:Tetracyclin repressor,
C-terminal - Frankia sp. EAN1pec
Length = 218
Score = 41.5 bits (93), Expect = 0.026
Identities = 23/96 (23%), Positives = 42/96 (43%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L++++ G++G + R+L + LG+ +LY+HF +K E + P
Sbjct: 19 LEIIDRDGLEGFSIRRLGDELGINGTSLYYHFEDKDAILHGVRMLVLREGQVGAEPLESF 78
Query: 170 DWRSFLIGNARSFRQALLAYRQHNGTMCSSCRSRPL 63
W+ L +R+ LL + M + RPL
Sbjct: 79 TWQEHLRTAVIQYREVLLRHPNTAPLMSPAALLRPL 114
>UniRef50_A4FKH6 Cluster: TetR-family transcriptional regulator;
n=2; Actinomycetales|Rep: TetR-family transcriptional
regulator - Saccharopolyspora erythraea (strain NRRL
23338)
Length = 228
Score = 41.5 bits (93), Expect = 0.026
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LL++ G+DGL R L +RLGV A+YWH K
Sbjct: 18 LLDDEGLDGLNMRSLGKRLGVAATAIYWHIATK 50
>UniRef50_A1SM15 Cluster: Regulatory protein, TetR; n=2;
Actinomycetales|Rep: Regulatory protein, TetR -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 185
Score = 41.5 bits (93), Expect = 0.026
Identities = 28/79 (35%), Positives = 37/79 (46%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADDDW 165
+L+ G+ LT R+L LGVQ ALY HF NK+ + P A DD
Sbjct: 15 VLDAYGLADLTMRRLGAELGVQPSALYHHFANKQTLLAAVADEVLARGPSGPRPDAWDDR 74
Query: 164 RSFLIGNARSFRQALLAYR 108
+ + G R A+LAYR
Sbjct: 75 VAAVCG---ELRDAMLAYR 90
>UniRef50_UPI000050FA8F Cluster: COG1309: Transcriptional regulator;
n=1; Brevibacterium linens BL2|Rep: COG1309:
Transcriptional regulator - Brevibacterium linens BL2
Length = 163
Score = 41.1 bits (92), Expect = 0.035
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
LD+L+ G+ L+ R+LA L VQ ALYWH ++K+
Sbjct: 13 LDILSRYGLGDLSMRRLARELDVQPSALYWHVKDKQ 48
>UniRef50_Q9X7X9 Cluster: Putative regulatory protein; n=1;
Streptomyces coelicolor|Rep: Putative regulatory protein
- Streptomyces coelicolor
Length = 223
Score = 40.7 bits (91), Expect = 0.046
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -3
Query: 359 VPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
V ++ NE G G + R +A R+GV PALY+H+ NK+
Sbjct: 29 VHAMEAFNEHGYHGTSVRNIAGRVGVTVPALYYHYENKQ 67
>UniRef50_Q9FBW1 Cluster: Putative TetR-family transcriptional
regulator; n=1; Streptomyces coelicolor|Rep: Putative
TetR-family transcriptional regulator - Streptomyces
coelicolor
Length = 190
Score = 40.3 bits (90), Expect = 0.061
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+LL+ G D L+ R++AER+G++ P+LY HF +K
Sbjct: 22 ELLDAEGPDALSMRRIAERVGIRAPSLYKHFADK 55
>UniRef50_Q18SY8 Cluster: Transcriptional regulator, TetR family;
n=2; Desulfitobacterium hafniense|Rep: Transcriptional
regulator, TetR family - Desulfitobacterium hafniense
(strain DCB-2)
Length = 201
Score = 40.3 bits (90), Expect = 0.061
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = -3
Query: 359 VPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ + L+NE G+ GL+TR++A+R GV + ++ HF++K
Sbjct: 14 ITAISLINEKGLQGLSTREVAKREGVSEATIFKHFKSK 51
>UniRef50_Q97TR9 Cluster: HTH transcriptional regulator TetR family;
n=4; Clostridium|Rep: HTH transcriptional regulator TetR
family - Clostridium acetobutylicum
Length = 187
Score = 39.9 bits (89), Expect = 0.080
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRN 249
L +E+G+D +T +KLAE+L ++ P+LY HF N
Sbjct: 18 LADEIGLDKVTFQKLAEKLDIKSPSLYNHFSN 49
>UniRef50_A5CM54 Cluster: Transcriptional regulator, TetR family;
n=1; Clavibacter michiganensis subsp. michiganensis
NCPPB 382|Rep: Transcriptional regulator, TetR family -
Clavibacter michiganensis subsp. michiganensis (strain
NCPPB 382)
Length = 231
Score = 39.9 bits (89), Expect = 0.080
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L E G+ G +TR +AER+G++Q +LY+HF K
Sbjct: 36 LFAEHGLSGTSTRAIAERVGIRQASLYYHFAGK 68
>UniRef50_A6F9A2 Cluster: Transcriptional regulator, TetR family;
n=1; Moritella sp. PE36|Rep: Transcriptional regulator,
TetR family - Moritella sp. PE36
Length = 221
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L NE G +TT +A LG+ LY+HFRNK
Sbjct: 12 LELFNECGERNVTTNHIAAHLGISPGNLYYHFRNK 46
>UniRef50_P67434 Cluster: Uncharacterized HTH-type transcriptional
regulator Rv1353c/MT1396; n=17; Mycobacterium|Rep:
Uncharacterized HTH-type transcriptional regulator
Rv1353c/MT1396 - Mycobacterium tuberculosis
Length = 261
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRAD-D 171
+L +V +D L+ L + LGV ++YW+FR K+ + + P +
Sbjct: 27 ELAQQVSIDNLSMPLLGKHLGVGVTSIYWYFR-KKDDLLNAMTDRALSKYVFATPYIEAG 85
Query: 170 DWRSFLIGNARSFRQ 126
DWR L +ARS R+
Sbjct: 86 DWRETLRNHARSMRK 100
>UniRef50_Q0SCI1 Cluster: Probable transcriptional regulator, TetR
family protein; n=3; Actinobacteria (class)|Rep:
Probable transcriptional regulator, TetR family protein
- Rhodococcus sp. (strain RHA1)
Length = 227
Score = 39.1 bits (87), Expect = 0.14
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADDDW 165
L ++ GV+ LT R++AE LGV+ +LY H +NK +P DW
Sbjct: 27 LADDSGVEALTMRRIAETLGVEAMSLYRHVKNKDDLLDGMVDVVFG---EIDLPPNGRDW 83
Query: 164 RSFLIGNARSFRQALLAYR 108
+S + A S R L +R
Sbjct: 84 KSAMRRRAISVRDVLARHR 102
>UniRef50_Q07W52 Cluster: Transcriptional regulator, TetR family
protein; n=9; Gammaproteobacteria|Rep: Transcriptional
regulator, TetR family protein - Shewanella
frigidimarina (strain NCIMB 400)
Length = 220
Score = 39.1 bits (87), Expect = 0.14
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L NE G +TT +A LG+ LY+HFRNK
Sbjct: 12 LELFNEHGERSITTNHIAAHLGISPGNLYYHFRNK 46
>UniRef50_Q3Y3K2 Cluster: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal; n=1; Enterococcus faecium DO|Rep:
Regulatory protein, TetR:Tetracyclin repressor,
C-terminal - Enterococcus faecium DO
Length = 222
Score = 38.7 bits (86), Expect = 0.19
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -3
Query: 347 DLLNEV-GVDGLTTRKLAERLGVQQPALYWHFRNKR 243
D+L E + L+ R +A R+ VQ PALYW+F+NK+
Sbjct: 16 DILAETQALSQLSMRNIANRIHVQAPALYWYFKNKQ 51
>UniRef50_Q0AXB2 Cluster: Putative transcriptional regulator, TetR
family; n=1; Syntrophomonas wolfei subsp. wolfei str.
Goettingen|Rep: Putative transcriptional regulator, TetR
family - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 241
Score = 38.7 bits (86), Expect = 0.19
Identities = 14/35 (40%), Positives = 26/35 (74%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+++++++GV GLT R++A R + + A+Y HF NK
Sbjct: 17 VEIIDQLGVQGLTIREIASRQEISEAAIYRHFANK 51
>UniRef50_A4BUX2 Cluster: Transcriptional regulator, TetR family
protein; n=1; Nitrococcus mobilis Nb-231|Rep:
Transcriptional regulator, TetR family protein -
Nitrococcus mobilis Nb-231
Length = 203
Score = 38.7 bits (86), Expect = 0.19
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L+++ E G D + LA RLGV + + YWHF N++
Sbjct: 19 LEIIAESGFDTVAVEPLARRLGVTKGSFYWHFANRQ 54
>UniRef50_Q7NVF9 Cluster: Probable transcriptional regulator, TetR
family; n=1; Chromobacterium violaceum|Rep: Probable
transcriptional regulator, TetR family - Chromobacterium
violaceum
Length = 214
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L NE G +TT +A LG+ LY+HFRNK
Sbjct: 17 LKLFNEQGERSITTNHIAAHLGISPGNLYYHFRNK 51
>UniRef50_Q6FES7 Cluster: Putative transcriptional regulator; n=2;
Acinetobacter|Rep: Putative transcriptional regulator -
Acinetobacter sp. (strain ADP1)
Length = 229
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L L NE G +TT +A LG+ LY+HFRNK+
Sbjct: 18 LQLFNERGERSVTTNHIAAELGISPGNLYYHFRNKQ 53
>UniRef50_Q62IL2 Cluster: Transcriptional reguator, TetR family;
n=37; Proteobacteria|Rep: Transcriptional reguator, TetR
family - Burkholderia mallei (Pseudomonas mallei)
Length = 239
Score = 38.3 bits (85), Expect = 0.25
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L NE+G +TT +AE + + LY+HFRNK
Sbjct: 18 LKLFNEIGEPNVTTTTIAEEMEISPGNLYYHFRNK 52
>UniRef50_Q139L5 Cluster: Putative uncharacterized protein; n=1;
Rhodopseudomonas palustris BisB5|Rep: Putative
uncharacterized protein - Rhodopseudomonas palustris
(strain BisB5)
Length = 226
Score = 38.3 bits (85), Expect = 0.25
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L E+G+DG+ TR LAE GV Q A+ +HF +K
Sbjct: 26 LKLFAELGMDGVRTRALAEVAGVNQSAIPYHFGSK 60
>UniRef50_Q0SJS8 Cluster: Probable tetracycline repressor protein;
n=2; Rhodococcus sp. RHA1|Rep: Probable tetracycline
repressor protein - Rhodococcus sp. (strain RHA1)
Length = 223
Score = 38.3 bits (85), Expect = 0.25
Identities = 18/81 (22%), Positives = 40/81 (49%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
+++++ G+D + +LA+ +GV+ P+LY HF +K + +
Sbjct: 19 IEIIDSEGLDAFSLPRLAKHIGVRAPSLYHHFSDKSEILEAVARQIAGAGNLPR-RKPGP 77
Query: 170 DWRSFLIGNARSFRQALLAYR 108
DW F + + + R+++L +R
Sbjct: 78 DWPEFFVTLSMNLRRSILKHR 98
>UniRef50_Q0RTM1 Cluster: Putative regulatory protein; n=1; Frankia
alni ACN14a|Rep: Putative regulatory protein - Frankia
alni (strain ACN14a)
Length = 220
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L L +E G+ GLT R+LA LGV+ +LY H NKR
Sbjct: 16 LRLADEGGLPGLTMRRLAAELGVEAMSLYNHVANKR 51
>UniRef50_Q095S5 Cluster: TetR; n=1; Stigmatella aurantiaca
DW4/3-1|Rep: TetR - Stigmatella aurantiaca DW4/3-1
Length = 180
Score = 38.3 bits (85), Expect = 0.25
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 284 VQQPALYWHFRNKR-XXXXXXXXXXXXENHTHSVPRADDDWRSFLIGNARSFRQALLAYR 108
+Q PALYWHF++K+ P A W ++ + RS RQ LL+YR
Sbjct: 1 MQAPALYWHFKSKQDLIDEMATTMFRDLVKATGEPDAGQPWDEWMAQSGRSLRQMLLSYR 60
>UniRef50_A1G1K8 Cluster: Transcriptional regulator, TetR family;
n=7; Xanthomonadaceae|Rep: Transcriptional regulator,
TetR family - Stenotrophomonas maltophilia R551-3
Length = 228
Score = 38.3 bits (85), Expect = 0.25
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LDL+ E GV + LA RLGV + + YWHF ++
Sbjct: 58 LDLIAEQGVGAVAVEPLARRLGVTKGSFYWHFPSR 92
>UniRef50_Q9RZ11 Cluster: Transcriptional regulator, TetR family;
n=1; Deinococcus radiodurans|Rep: Transcriptional
regulator, TetR family - Deinococcus radiodurans
Length = 224
Score = 37.9 bits (84), Expect = 0.32
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LD L+ G+DGL+ RKLA LGV +LY +F K
Sbjct: 23 LDTLHRDGLDGLSIRKLAAELGVSPKSLYHYFPTK 57
>UniRef50_Q828S3 Cluster: Putative TetR-family transcriptional
regulator; n=2; Streptomyces|Rep: Putative TetR-family
transcriptional regulator - Streptomyces avermitilis
Length = 206
Score = 37.9 bits (84), Expect = 0.32
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
DLL+EVG D L+TR +A R GV ++Y F NKR
Sbjct: 32 DLLDEVGYDALSTRAVALRAGVPIGSVYRFFGNKR 66
>UniRef50_Q7NZ45 Cluster: Probable transcriptional regulator, TetR
family; n=1; Chromobacterium violaceum|Rep: Probable
transcriptional regulator, TetR family - Chromobacterium
violaceum
Length = 213
Score = 37.9 bits (84), Expect = 0.32
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L N+ G +TT +AER+ + LY+HFRNK
Sbjct: 18 LQLFNQEGERVITTNHIAERMNISTGKLYYHFRNK 52
>UniRef50_Q2JEU1 Cluster: Transcriptional regulator, TetR family;
n=1; Frankia sp. CcI3|Rep: Transcriptional regulator,
TetR family - Frankia sp. (strain CcI3)
Length = 332
Score = 37.9 bits (84), Expect = 0.32
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ L +E G G + R ++ERLGV + ALY+HF +K
Sbjct: 27 MSLFSEQGYAGTSVRDISERLGVTKAALYYHFPSK 61
>UniRef50_Q0SA98 Cluster: Probable transcriptional regulator, TetR
family protein; n=1; Rhodococcus sp. RHA1|Rep: Probable
transcriptional regulator, TetR family protein -
Rhodococcus sp. (strain RHA1)
Length = 225
Score = 37.9 bits (84), Expect = 0.32
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LD E G G + R +A R+GV PALY+H NK
Sbjct: 35 LDAFYEHGFHGTSVRDIARRVGVTVPALYYHHENK 69
>UniRef50_A4XB42 Cluster: Regulatory protein, TetR; n=2;
Salinispora|Rep: Regulatory protein, TetR - Salinispora
tropica CNB-440
Length = 230
Score = 37.9 bits (84), Expect = 0.32
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L E G + + R++AERL V + ALY+HF++K
Sbjct: 17 LELFTEQGYEKTSLREIAERLDVTKAALYYHFKSK 51
>UniRef50_A4F5U4 Cluster: TetR-family transcriptional regulator;
n=2; Actinomycetales|Rep: TetR-family transcriptional
regulator - Saccharopolyspora erythraea (strain NRRL
23338)
Length = 192
Score = 37.9 bits (84), Expect = 0.32
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L++EVG DGL+T +AER GV +LY F +KR
Sbjct: 8 LIDEVGYDGLSTTLIAERAGVAVGSLYQFFPDKR 41
>UniRef50_Q9A3T4 Cluster: Transcriptional regulator, TetR family;
n=2; Caulobacter|Rep: Transcriptional regulator, TetR
family - Caulobacter crescentus (Caulobacter vibrioides)
Length = 210
Score = 37.5 bits (83), Expect = 0.43
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L ++ GV ++TR++AE G+ QPALY +F K
Sbjct: 28 LTLFSQKGVQAVSTRQIAEIAGISQPALYAYFATK 62
>UniRef50_Q5NYL8 Cluster: Transcriptional regulatory protein,TetR
family; n=3; Rhodocyclaceae|Rep: Transcriptional
regulatory protein,TetR family - Azoarcus sp. (strain
EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 196
Score = 37.5 bits (83), Expect = 0.43
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -3
Query: 359 VPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
V D+L E GV GL LA+RL V + + YWHF+++
Sbjct: 15 VAATDVLAEEGVAGLRVEVLAKRLKVTKGSFYWHFQDR 52
>UniRef50_Q9RP98 Cluster: Regulatory protein; n=2; Streptomyces|Rep:
Regulatory protein - Streptomyces fradiae
Length = 187
Score = 37.5 bits (83), Expect = 0.43
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L E G + + R +AERL V +PA+Y+HF+ K
Sbjct: 16 LELFVEQGYEKTSLRGIAERLNVTKPAIYYHFQTK 50
>UniRef50_Q3W4K5 Cluster: Regulatory protein, TetR; n=3;
Actinomycetales|Rep: Regulatory protein, TetR - Frankia
sp. EAN1pec
Length = 251
Score = 37.5 bits (83), Expect = 0.43
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -3
Query: 335 EVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
E G G T R +A R GV PALY+H+ NK+
Sbjct: 78 EHGYHGTTVRDIARRAGVTVPALYYHYANKQ 108
>UniRef50_Q02BZ3 Cluster: Transcriptional regulator, TetR family;
n=1; Solibacter usitatus Ellin6076|Rep: Transcriptional
regulator, TetR family - Solibacter usitatus (strain
Ellin6076)
Length = 212
Score = 37.5 bits (83), Expect = 0.43
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ L E G G TTR+LA G+ +P LY HFR K
Sbjct: 19 IHLFAEKGFRGTTTRELAAAAGITEPVLYQHFRAK 53
>UniRef50_A6WGH8 Cluster: Transcriptional regulator, TetR family;
n=1; Kineococcus radiotolerans SRS30216|Rep:
Transcriptional regulator, TetR family - Kineococcus
radiotolerans SRS30216
Length = 263
Score = 37.5 bits (83), Expect = 0.43
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L +E G++ L+ RKL ERLGV+ +LY H NK
Sbjct: 38 LADESGLEALSMRKLGERLGVEAMSLYKHVANK 70
>UniRef50_Q88XZ4 Cluster: Transcription regulator; n=2;
Lactobacillus|Rep: Transcription regulator -
Lactobacillus plantarum
Length = 200
Score = 37.1 bits (82), Expect = 0.57
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
G D +TR +A +G+ QPALY HF++K
Sbjct: 27 GYDATSTRDIANAIGITQPALYHHFKDK 54
>UniRef50_Q9F9H1 Cluster: PhaD; n=2; Alcanivorax borkumensis|Rep:
PhaD - Alcanivorax borkumensis
Length = 233
Score = 37.1 bits (82), Expect = 0.57
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L N G +TT +AE LG+ LY+HFRNK
Sbjct: 13 LVLFNRQGERNVTTNHIAEALGISPGNLYYHFRNK 47
>UniRef50_Q3W877 Cluster: Regulatory protein, TetR; n=1; Frankia sp.
EAN1pec|Rep: Regulatory protein, TetR - Frankia sp.
EAN1pec
Length = 291
Score = 37.1 bits (82), Expect = 0.57
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++L E G G + R ++ERLGV + ALY+HF +K
Sbjct: 22 VELFAERGYAGTSVRDISERLGVTKAALYYHFSSK 56
>UniRef50_Q0RQU0 Cluster: Putative TetR-family transcriptional
regulator; n=1; Frankia alni ACN14a|Rep: Putative
TetR-family transcriptional regulator - Frankia alni
(strain ACN14a)
Length = 321
Score = 37.1 bits (82), Expect = 0.57
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ L E G G + R ++ERLGV + ALY+HF +K
Sbjct: 22 VSLFGEQGYAGTSVRDISERLGVTKAALYYHFPSK 56
>UniRef50_A7BER1 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 236
Score = 37.1 bits (82), Expect = 0.57
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L++E G+ L+ R L +RLGV Q A Y HF +K
Sbjct: 19 LGLVDEEGLSALSLRSLGKRLGVSQAAFYRHFPDK 53
>UniRef50_A6W6F5 Cluster: Transcriptional regulator, TetR family;
n=1; Kineococcus radiotolerans SRS30216|Rep:
Transcriptional regulator, TetR family - Kineococcus
radiotolerans SRS30216
Length = 232
Score = 37.1 bits (82), Expect = 0.57
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L E G +TR +AER+G++Q +LY+HF K
Sbjct: 44 LFGESGYAATSTRAIAERVGIRQASLYYHFAGK 76
>UniRef50_A4FQP9 Cluster: Transcriptional regulator, TetR family;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep:
Transcriptional regulator, TetR family -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 213
Score = 37.1 bits (82), Expect = 0.57
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L++L+E G +GLT R +AERLGV + +LY H ++
Sbjct: 26 LEVLDESGHNGLTMRAVAERLGVGKMSLYHHVADR 60
>UniRef50_A3HSQ5 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 225
Score = 37.1 bits (82), Expect = 0.57
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LL E+G++ T +KL+E++G +PA+Y +F NK
Sbjct: 37 LLLELGMEHFTFKKLSEKIGGTEPAIYRYFENK 69
>UniRef50_Q8UF32 Cluster: Transcriptional regulator, TetR family;
n=1; Agrobacterium tumefaciens str. C58|Rep:
Transcriptional regulator, TetR family - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 220
Score = 36.7 bits (81), Expect = 0.75
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LDL N G D +TT ++AE + + + LY+HFR K
Sbjct: 24 LDLFNGRGPDRVTTAEIAEAVKINEGNLYYHFRTK 58
>UniRef50_Q5LWW7 Cluster: Transcriptional regulator, TetR family;
n=4; Rhodobacteraceae|Rep: Transcriptional regulator,
TetR family - Silicibacter pomeroyi
Length = 212
Score = 36.7 bits (81), Expect = 0.75
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRAD 174
+LL E GV+ + LA++LGV + YW+F+++ +N + V RA+
Sbjct: 20 ELLTESGVEAVKIMPLAQKLGVSRTGFYWYFKDRETLLEAMIQRWEEKNTGNLVARAE 77
>UniRef50_Q3SGW2 Cluster: Possible Transcriptional Regulator, TetR
family; n=1; Thiobacillus denitrificans ATCC 25259|Rep:
Possible Transcriptional Regulator, TetR family -
Thiobacillus denitrificans (strain ATCC 25259)
Length = 181
Score = 36.7 bits (81), Expect = 0.75
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++++ GV LTTR L++ +G+ QP L+ HF +K
Sbjct: 1 MEIIRHEGVAKLTTRSLSQAVGIAQPTLFLHFGSK 35
>UniRef50_A7HTC3 Cluster: Transcriptional regulator, TetR family;
n=1; Parvibaculum lavamentivorans DS-1|Rep:
Transcriptional regulator, TetR family - Parvibaculum
lavamentivorans DS-1
Length = 257
Score = 36.7 bits (81), Expect = 0.75
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
G+D ++ RK+A ++G+ Q A+Y HF NK
Sbjct: 55 GIDHVSMRKIARKVGITQAAIYQHFENK 82
>UniRef50_A6VUY6 Cluster: Transcriptional regulator, TetR family;
n=3; Oceanospirillaceae|Rep: Transcriptional regulator,
TetR family - Marinomonas sp. MWYL1
Length = 200
Score = 36.7 bits (81), Expect = 0.75
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++ E GV+ L+ RKLA+ +GV + A Y HF++K
Sbjct: 24 IIKEQGVESLSMRKLADTVGVSRTAPYHHFKDK 56
>UniRef50_A4BH58 Cluster: Transcriptional reguator, TetR family
protein; n=1; Reinekea sp. MED297|Rep: Transcriptional
reguator, TetR family protein - Reinekea sp. MED297
Length = 219
Score = 36.7 bits (81), Expect = 0.75
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L NE G LTT +A+ G+ LY+HFRNK
Sbjct: 12 LVLANESGAARLTTNAMADEAGISVGNLYYHFRNK 46
>UniRef50_A1SD79 Cluster: Regulatory protein, TetR; n=1;
Nocardioides sp. JS614|Rep: Regulatory protein, TetR -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 211
Score = 36.7 bits (81), Expect = 0.75
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L++ E G +G T + ER G+ ++YWHF+NK
Sbjct: 24 LEIAAERGYEGTTVGLVTERTGLPASSVYWHFKNK 58
>UniRef50_Q9S250 Cluster: Putative transcriptional regulator; n=2;
Streptomyces|Rep: Putative transcriptional regulator -
Streptomyces coelicolor
Length = 213
Score = 36.3 bits (80), Expect = 0.99
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L++ G+ ++TR+LA LGV P+LY HFR K
Sbjct: 21 LVDAEGLAAVSTRRLAAELGVSGPSLYNHFRTK 53
>UniRef50_Q9K017 Cluster: Transcriptional regulator, TetR family;
n=4; Neisseria|Rep: Transcriptional regulator, TetR
family - Neisseria meningitidis serogroup B
Length = 216
Score = 36.3 bits (80), Expect = 0.99
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L NE G ++T +A LG+ LY+HFRNK
Sbjct: 20 LALFNEEGERNISTNHIAAHLGISPGNLYYHFRNK 54
>UniRef50_Q8RER3 Cluster: Transcriptional regulator, TetR family;
n=2; Fusobacterium nucleatum|Rep: Transcriptional
regulator, TetR family - Fusobacterium nucleatum subsp.
nucleatum
Length = 205
Score = 36.3 bits (80), Expect = 0.99
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++L+NEVG + L+ RKLA GV A Y HF++K
Sbjct: 26 IELINEVGENKLSLRKLAIICGVSNSAPYTHFKSK 60
>UniRef50_Q833A1 Cluster: Transcriptional regulator, TetR family;
n=2; Enterococcus|Rep: Transcriptional regulator, TetR
family - Enterococcus faecalis (Streptococcus faecalis)
Length = 189
Score = 36.3 bits (80), Expect = 0.99
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRN 249
+L E+GV LT + LA LG++ P+LY HF+N
Sbjct: 18 NLAEELGVQQLTFQNLAVDLGIKYPSLYNHFKN 50
>UniRef50_Q5YUL7 Cluster: Putative transcriptional regulator; n=1;
Nocardia farcinica|Rep: Putative transcriptional
regulator - Nocardia farcinica
Length = 210
Score = 36.3 bits (80), Expect = 0.99
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L +L+E G+ ++TR +AERLGV+ + WH + K
Sbjct: 24 LAVLDERGLAAVSTRAIAERLGVRMNTVLWHVKTK 58
>UniRef50_Q0BZH4 Cluster: Transcriptional regulator, TetR family;
n=1; Hyphomonas neptunium ATCC 15444|Rep:
Transcriptional regulator, TetR family - Hyphomonas
neptunium (strain ATCC 15444)
Length = 260
Score = 36.3 bits (80), Expect = 0.99
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LL+EVG++ L+T + R G+ PALY +F NK
Sbjct: 81 LLDEVGLERLSTNLVCRRAGLSPPALYRYFPNK 113
>UniRef50_Q0BQH2 Cluster: Transcriptional regulator, TetR family;
n=1; Granulibacter bethesdensis CGDNIH1|Rep:
Transcriptional regulator, TetR family - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 257
Score = 36.3 bits (80), Expect = 0.99
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
LD+LN GVD +TT LA + + LY+HF K+
Sbjct: 53 LDILNIEGVDAMTTSHLAAVCNINEGNLYYHFHTKQ 88
>UniRef50_A6Q131 Cluster: Transcriptional regulator, TetR family;
n=1; Nitratiruptor sp. SB155-2|Rep: Transcriptional
regulator, TetR family - Nitratiruptor sp. (strain
SB155-2)
Length = 201
Score = 36.3 bits (80), Expect = 0.99
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
G G++ K+A+ GV +PA+Y+HF+NK
Sbjct: 19 GYSGVSLDKIAKEAGVTKPAIYYHFKNK 46
>UniRef50_A5EXF6 Cluster: TetR family transcriptional regulator;
n=1; Dichelobacter nodosus VCS1703A|Rep: TetR family
transcriptional regulator - Dichelobacter nodosus
(strain VCS1703A)
Length = 199
Score = 36.3 bits (80), Expect = 0.99
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L +E GV T +AE+ GV + A+YWHF +K
Sbjct: 20 LILFDEQGVTATTLGAIAEKAGVTRGAIYWHFDDK 54
>UniRef50_A4TZZ4 Cluster: Regulatory protein, TetR; n=1;
Magnetospirillum gryphiswaldense|Rep: Regulatory
protein, TetR - Magnetospirillum gryphiswaldense
Length = 198
Score = 36.3 bits (80), Expect = 0.99
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L E+G D +T +A RLG+ QPA++ HF K
Sbjct: 21 LAAELGPDRITAEAIANRLGISQPAIFKHFPRK 53
>UniRef50_A4B9Z1 Cluster: Transcriptional regulator, TetR family
protein; n=1; Reinekea sp. MED297|Rep: Transcriptional
regulator, TetR family protein - Reinekea sp. MED297
Length = 210
Score = 36.3 bits (80), Expect = 0.99
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L NE G +TT +A+ +G+ LY+HF NK
Sbjct: 12 LRLFNEKGERSITTNHIADEMGISPGLLYYHFTNK 46
>UniRef50_A0PL09 Cluster: Transcriptional regulator; n=4;
Mycobacterium|Rep: Transcriptional regulator -
Mycobacterium ulcerans (strain Agy99)
Length = 179
Score = 36.3 bits (80), Expect = 0.99
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+L GV G + + +A+RLG+ +PALY+HF ++
Sbjct: 19 ELFLRQGVRGTSLQDIADRLGITKPALYYHFASR 52
>UniRef50_Q5WLF6 Cluster: TetR family transcriptional regulator;
n=3; Bacillus|Rep: TetR family transcriptional regulator
- Bacillus clausii (strain KSM-K16)
Length = 215
Score = 35.9 bits (79), Expect = 1.3
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+L E G +G +T+ + E++G+ + LY+HF++K
Sbjct: 20 ELFGEKGFEGTSTKDILEKVGIARGTLYYHFKSK 53
>UniRef50_Q48AD2 Cluster: Transcriptional regulator, TetR family;
n=1; Colwellia psychrerythraea 34H|Rep: Transcriptional
regulator, TetR family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 218
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++L NE G +TT +A L + LY+HFRNK
Sbjct: 12 IELFNEQGERNVTTNHIAAHLAISPGNLYYHFRNK 46
>UniRef50_Q47E32 Cluster: Regulatory protein, TetR; n=1;
Dechloromonas aromatica RCB|Rep: Regulatory protein,
TetR - Dechloromonas aromatica (strain RCB)
Length = 205
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ +E GV T K+A+ GV + A+YWHF++K
Sbjct: 23 VFHECGVSRSTLEKIAKAAGVTRGAVYWHFKDK 55
>UniRef50_Q211C7 Cluster: Transcriptional regulator, TetR family;
n=1; Rhodopseudomonas palustris BisB18|Rep:
Transcriptional regulator, TetR family -
Rhodopseudomonas palustris (strain BisB18)
Length = 258
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
++L VG + +TR LAE+ GV Q A+ +HF KR
Sbjct: 31 IELFATVGYEAASTRALAEQAGVNQAAIPYHFGGKR 66
>UniRef50_Q0M1I1 Cluster: Regulatory protein, TetR; n=1; Caulobacter
sp. K31|Rep: Regulatory protein, TetR - Caulobacter sp.
K31
Length = 233
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++L E G + LTT + +R G+ PALY +F NK
Sbjct: 40 EMLRETGFEQLTTNAICKRAGLTPPALYRYFPNK 73
>UniRef50_Q032V7 Cluster: Transcriptional regulator; n=3;
Lactococcus lactis|Rep: Transcriptional regulator -
Lactococcus lactis subsp. cremoris (strain SK11)
Length = 181
Score = 35.9 bits (79), Expect = 1.3
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
G++ LT K+A+ L + QPA+Y HF++K
Sbjct: 19 GIEKLTISKIAKELNISQPAIYKHFKSK 46
>UniRef50_A4IL55 Cluster: Transcriptional regulator TetR family;
n=1; Geobacillus thermodenitrificans NG80-2|Rep:
Transcriptional regulator TetR family - Geobacillus
thermodenitrificans (strain NG80-2)
Length = 190
Score = 35.9 bits (79), Expect = 1.3
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LL E G +G T LAERLGV + A+Y +F NK
Sbjct: 19 LLLEHGYEGFTFGLLAERLGVARSAIYKYFENK 51
>UniRef50_A4FFS8 Cluster: TetR-family transcriptional regulator;
n=7; Bacteria|Rep: TetR-family transcriptional regulator
- Saccharopolyspora erythraea (strain NRRL 23338)
Length = 188
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
+L +EVG LT LA R GV+ +LY H RN R
Sbjct: 17 ELADEVGFGNLTVSALARRFGVKDASLYSHVRNLR 51
>UniRef50_A3VB16 Cluster: Putative uncharacterized protein; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
uncharacterized protein - Rhodobacterales bacterium
HTCC2654
Length = 224
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
LD E G DG +T+ +AER G+ + ++ HF +K+
Sbjct: 39 LDCFAEFGFDGTSTKMIAERAGIGEATIFRHFPSKK 74
>UniRef50_A3Q347 Cluster: Transcriptional regulator, TetR family;
n=6; Mycobacterium|Rep: Transcriptional regulator, TetR
family - Mycobacterium sp. (strain JLS)
Length = 191
Score = 35.9 bits (79), Expect = 1.3
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = -3
Query: 386 QSCSRIQ*SVPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+S ++I+ LDL+ E GV G + + +A+R+GV + A+Y F+ K
Sbjct: 12 RSAAQIRVLDAALDLIAENGVSGTSLQMIADRIGVTKAAVYHQFKTK 58
>UniRef50_Q9A905 Cluster: Transcriptional regulator, TetR family;
n=2; Caulobacter|Rep: Transcriptional regulator, TetR
family - Caulobacter crescentus (Caulobacter vibrioides)
Length = 211
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
G G T RK+A+ +GV ALY HFR+K
Sbjct: 38 GYAGATIRKIADAVGVSSTALYMHFRDK 65
>UniRef50_Q8F8U7 Cluster: Transcriptional regulator, tetR family;
n=2; Leptospira interrogans|Rep: Transcriptional
regulator, tetR family - Leptospira interrogans
Length = 203
Score = 35.5 bits (78), Expect = 1.7
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+++L E G+DGL+ RK+AE+L + Y HF ++
Sbjct: 24 MEILQEKGIDGLSMRKIAEKLNCSVASPYSHFTSQ 58
>UniRef50_Q3W8V8 Cluster: Regulatory protein, TetR:Tetracyclin
repressor, C-terminal; n=1; Frankia sp. EAN1pec|Rep:
Regulatory protein, TetR:Tetracyclin repressor,
C-terminal - Frankia sp. EAN1pec
Length = 242
Score = 35.5 bits (78), Expect = 1.7
Identities = 23/80 (28%), Positives = 37/80 (46%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L++ + G+D ++ R++A LGV LY H ++K H +
Sbjct: 35 LEIADAEGLDAVSMRRVAAMLGVGTMTLYTHVQDKE---ALLELMLDALTAEHLLAGTGP 91
Query: 170 DWRSFLIGNARSFRQALLAY 111
DWR+ L AR RQ+LL +
Sbjct: 92 DWRTGLTRIARLTRQSLLRH 111
>UniRef50_A4FP31 Cluster: TetR-family transcriptional regulator;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep:
TetR-family transcriptional regulator -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 228
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LD L E G G++ +A+R+G+ PALY +F N+
Sbjct: 26 LDQLAESGPAGVSVNSIAKRMGITGPALYRYFENR 60
>UniRef50_A4FLS1 Cluster: TetR-family transcriptional regulator;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep:
TetR-family transcriptional regulator -
Saccharopolyspora erythraea (strain NRRL 23338)
Length = 236
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++LL+ GV L+ RKLA+RL +LYWH K
Sbjct: 41 VELLDRDGVRQLSMRKLADRLQAHATSLYWHVSTK 75
>UniRef50_A4BJD7 Cluster: Putative uncharacterized protein; n=1;
Reinekea sp. MED297|Rep: Putative uncharacterized
protein - Reinekea sp. MED297
Length = 139
Score = 35.5 bits (78), Expect = 1.7
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
+L E G++ L+ RK+A G P++Y++F+NK+
Sbjct: 14 VLTEQGINKLSLRKIAAETGCAAPSIYYYFKNKQ 47
>UniRef50_A3PUZ9 Cluster: Transcriptional regulator, TetR family;
n=3; Mycobacterium|Rep: Transcriptional regulator, TetR
family - Mycobacterium sp. (strain JLS)
Length = 195
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -3
Query: 341 LNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LN+ GV LTTR++AER G PA+Y F +K
Sbjct: 23 LNDEGVARLTTRRVAERAGTSVPAVYELFDDK 54
>UniRef50_A7I8M3 Cluster: Transcriptional regulator, TetR family;
n=1; Candidatus Methanoregula boonei 6A8|Rep:
Transcriptional regulator, TetR family - Methanoregula
boonei (strain 6A8)
Length = 202
Score = 35.5 bits (78), Expect = 1.7
Identities = 12/35 (34%), Positives = 26/35 (74%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+D++ + G +G+T +A+++GV + A+YW+F +K
Sbjct: 21 IDVIAQRGCEGMTVDDVAKKIGVTKGAVYWYFPSK 55
>UniRef50_Q8E8I9 Cluster: Transcriptional regulator, TetR family;
n=12; Shewanella|Rep: Transcriptional regulator, TetR
family - Shewanella oneidensis
Length = 215
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L NE G +TT +A + + LY+HFRNK
Sbjct: 12 LELFNEHGERNITTNHIAAHMNMSPGNLYYHFRNK 46
>UniRef50_Q5HKI3 Cluster: Transcriptional regulator, TetR family;
n=3; Staphylococcus|Rep: Transcriptional regulator, TetR
family - Staphylococcus epidermidis (strain ATCC 35984 /
RP62A)
Length = 179
Score = 35.1 bits (77), Expect = 2.3
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++NE G D LT +A+R G+ + L++HF++K
Sbjct: 17 IINEKGADYLTLDAVAQRAGISKGGLFYHFKSK 49
>UniRef50_Q5E8J6 Cluster: Transcriptional regulator, TetR family;
n=5; Vibrionaceae|Rep: Transcriptional regulator, TetR
family - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 214
Score = 35.1 bits (77), Expect = 2.3
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L L NE G +TT +A L + LY+HFRNK E T P A+D
Sbjct: 12 LTLFNENGERSVTTNHIAAHLEISPGNLYYHFRNKEEIISGIFDNYAKELKTRFQPMAED 71
>UniRef50_Q393R5 Cluster: Transcriptional regulator, TetR family;
n=9; Burkholderia cepacia complex|Rep: Transcriptional
regulator, TetR family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 277
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++L E G G +TR++A GV PAL ++F NK
Sbjct: 30 IELFGERGFAGASTREIAAMAGVNAPALQYYFENK 64
>UniRef50_Q30RP7 Cluster: Transcriptional regulator, TetR family;
n=1; Thiomicrospira denitrificans ATCC 33889|Rep:
Transcriptional regulator, TetR family - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 205
Score = 35.1 bits (77), Expect = 2.3
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L +E G + RK+A +G+++ ALY HF+NK
Sbjct: 24 LFSEHGFKATSVRKIASEVGIRESALYNHFKNK 56
>UniRef50_Q2SD10 Cluster: Transcriptional regulator; n=1; Hahella
chejuensis KCTC 2396|Rep: Transcriptional regulator -
Hahella chejuensis (strain KCTC 2396)
Length = 219
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L++EVGV G T ++A R G+ +LY +F NK
Sbjct: 42 LISEVGVQGAKTSEIARRAGISLASLYRYFPNK 74
>UniRef50_Q1N3H1 Cluster: Transcription regulator, TetR family
protein; n=1; Oceanobacter sp. RED65|Rep: Transcription
regulator, TetR family protein - Oceanobacter sp. RED65
Length = 211
Score = 35.1 bits (77), Expect = 2.3
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++++ GV L+ RKLA+ +GV + A Y HF++K
Sbjct: 32 VEIIRSQGVSALSLRKLADMVGVSRTAPYHHFKDK 66
>UniRef50_Q0G3G6 Cluster: Transcriptional regulator (TetR/AcrR
family) protein; n=1; Fulvimarina pelagi HTCC2506|Rep:
Transcriptional regulator (TetR/AcrR family) protein -
Fulvimarina pelagi HTCC2506
Length = 238
Score = 35.1 bits (77), Expect = 2.3
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -3
Query: 377 SRIQ*SVPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
SR Q + DL+ E G G + + +AER+G+ + +LY H +NK
Sbjct: 5 SREQIIIASRDLIREKGYAGTSMQDVAERVGLLKGSLYTHVKNK 48
>UniRef50_Q032X3 Cluster: Transcriptional regulator; n=3;
Lactococcus lactis|Rep: Transcriptional regulator -
Lactococcus lactis subsp. cremoris (strain SK11)
Length = 191
Score = 35.1 bits (77), Expect = 2.3
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRN 249
+ L +E+G+ ++ +LAE G++ P+LY HF+N
Sbjct: 16 IKLASEIGLSNVSFPRLAEYFGIKAPSLYNHFKN 49
>UniRef50_A6Q5T5 Cluster: Transcriptional regulator, TetR family;
n=1; Nitratiruptor sp. SB155-2|Rep: Transcriptional
regulator, TetR family - Nitratiruptor sp. (strain
SB155-2)
Length = 201
Score = 35.1 bits (77), Expect = 2.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L N+ G ++T +A+ G+ LY+HFRNK
Sbjct: 12 LKLFNQFGTKDISTNHIAKATGISPGNLYYHFRNK 46
>UniRef50_A6M2H0 Cluster: Transcriptional regulator, TetR family;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator, TetR family - Clostridium
beijerinckii NCIMB 8052
Length = 202
Score = 35.1 bits (77), Expect = 2.3
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L+L + G D ++ R +A+ +G++ +LY HF+NK+
Sbjct: 12 LNLFSRKGFDAISVRDIAKAVGIKASSLYNHFKNKQ 47
>UniRef50_A6GE02 Cluster: Transcriptional regulator, TetR family
protein; n=1; Plesiocystis pacifica SIR-1|Rep:
Transcriptional regulator, TetR family protein -
Plesiocystis pacifica SIR-1
Length = 199
Score = 35.1 bits (77), Expect = 2.3
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LDL E+G++GL+ +A+++G+ + LY HF +K
Sbjct: 16 LDLSTEIGLEGLSIGVIAKQVGMSKSGLYAHFDSK 50
>UniRef50_A4Y017 Cluster: Transcriptional regulator, TetR family;
n=19; Gammaproteobacteria|Rep: Transcriptional
regulator, TetR family - Pseudomonas mendocina ymp
Length = 245
Score = 35.1 bits (77), Expect = 2.3
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L L N G +TT +A LG+ LY+HFRNK+
Sbjct: 42 LALFNGQGERNVTTNHIAAHLGISPGNLYYHFRNKQ 77
>UniRef50_A1B786 Cluster: Transcriptional regulator, TetR family;
n=1; Paracoccus denitrificans PD1222|Rep:
Transcriptional regulator, TetR family - Paracoccus
denitrificans (strain Pd 1222)
Length = 215
Score = 35.1 bits (77), Expect = 2.3
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LDL + +G D +TT +A ++GV Q AL+ HF K
Sbjct: 34 LDLADGIGPDRVTTGAVASQIGVTQAALFRHFPTK 68
>UniRef50_UPI000038D50F Cluster: COG1309: Transcriptional regulator;
n=1; Nostoc punctiforme PCC 73102|Rep: COG1309:
Transcriptional regulator - Nostoc punctiforme PCC 73102
Length = 201
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+LL+E G L+ RK+++R GV A Y HF +K
Sbjct: 22 ELLSEEGAHSLSLRKISQRAGVSHNAPYMHFADK 55
>UniRef50_Q9RWE9 Cluster: Transcriptional regulator, TetR family;
n=1; Deinococcus radiodurans|Rep: Transcriptional
regulator, TetR family - Deinococcus radiodurans
Length = 215
Score = 34.7 bits (76), Expect = 3.0
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+ E G + LT R LAERL V+ +LY HF ++
Sbjct: 42 LVEEQGAEALTMRTLAERLEVRPSSLYRHFAHR 74
>UniRef50_Q9KV25 Cluster: Transcriptional reguator, TetR family;
n=28; Vibrionales|Rep: Transcriptional reguator, TetR
family - Vibrio cholerae
Length = 242
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L+L N+ G +TT +A + + LY+HFRNK+
Sbjct: 43 LELFNQQGERNITTNHIAAHIEISPGNLYYHFRNKQ 78
>UniRef50_Q7P0X9 Cluster: Acrab operon repressor; n=1;
Chromobacterium violaceum|Rep: Acrab operon repressor -
Chromobacterium violaceum
Length = 215
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L +E GV T ++A G+ + A+YWHF+NK
Sbjct: 23 LFSEQGVSRTTLAEIATAAGLTRGAVYWHFQNK 55
>UniRef50_Q5SJJ9 Cluster: Putative uncharacterized protein TTHA1009;
n=1; Thermus thermophilus HB8|Rep: Putative
uncharacterized protein TTHA1009 - Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579)
Length = 104
Score = 34.7 bits (76), Expect = 3.0
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHF 255
L+LL E G G TTR++A R GV + L+ HF
Sbjct: 19 LELLAERGYRGATTREIARRAGVSEVTLFRHF 50
>UniRef50_Q47YV3 Cluster: Transcriptional regulator, TetR family;
n=1; Colwellia psychrerythraea 34H|Rep: Transcriptional
regulator, TetR family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 210
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L LL E G D +TTR +++ GV ++Y +F NK
Sbjct: 29 LQLLKEQGADAITTRNISKITGVSPGSIYQYFGNK 63
>UniRef50_Q9ZGB7 Cluster: LanK; n=2; Streptomyces|Rep: LanK -
Streptomyces cyanogenus
Length = 192
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L E G + + R++AE LG+ + ALY+HF+ K
Sbjct: 21 LELFIERGYEKTSMREIAEGLGITKAALYYHFKAK 55
>UniRef50_Q7WSR2 Cluster: Putative transcriptional regulator; n=2;
Arthrobacter|Rep: Putative transcriptional regulator -
Arthrobacter ilicis
Length = 203
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
++++ E GVDGL+ R+LA + V A HFR+K+
Sbjct: 20 MEIIEEAGVDGLSLRQLARDVNVSHGAPAKHFRDKQ 55
>UniRef50_Q3W8J2 Cluster: Regulatory protein, TetR; n=1; Frankia sp.
EAN1pec|Rep: Regulatory protein, TetR - Frankia sp.
EAN1pec
Length = 204
Score = 34.7 bits (76), Expect = 3.0
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L + G + ++ R++AER+ + ALY+HF +K
Sbjct: 23 LELFSTAGYEAVSLREIAERMNFTKAALYYHFSSK 57
>UniRef50_Q025G7 Cluster: Transcriptional regulator, TetR family;
n=1; Solibacter usitatus Ellin6076|Rep: Transcriptional
regulator, TetR family - Solibacter usitatus (strain
Ellin6076)
Length = 210
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
LDL + G +G TT+++A GV + ++ HF NK+
Sbjct: 21 LDLFSRKGFEGTTTKEIAAAAGVTEAIIFRHFPNKQ 56
>UniRef50_A6W9W2 Cluster: Transcriptional regulator, TetR family;
n=3; Actinomycetales|Rep: Transcriptional regulator,
TetR family - Kineococcus radiotolerans SRS30216
Length = 192
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
+DL E G D T ++AER GV + + HF +KR
Sbjct: 17 VDLFTEQGYDATTVTEIAERAGVTKSTFFRHFPDKR 52
>UniRef50_A6Q9F4 Cluster: Transcriptional regulator, TetR family;
n=1; Sulfurovum sp. NBC37-1|Rep: Transcriptional
regulator, TetR family - Sulfurovum sp. (strain NBC37-1)
Length = 217
Score = 34.7 bits (76), Expect = 3.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L + G T R +A +GV+Q ALY HF+NK
Sbjct: 25 LKLFSSKGYKATTVRDIAGAMGVKQSALYNHFKNK 59
>UniRef50_A4FLG0 Cluster: TetR-family transcriptional regulator;
n=2; Actinomycetales|Rep: TetR-family transcriptional
regulator - Saccharopolyspora erythraea (strain NRRL
23338)
Length = 220
Score = 34.7 bits (76), Expect = 3.0
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADD 171
L++++ G++GL+ R LA+ LGV+ +LY H K + V +
Sbjct: 19 LEIIDARGLEGLSMRGLADELGVKAASLYNHVPAKE---QLLQEIADDVTASVDVSGFEV 75
Query: 170 DWRSFLIGNARSFRQALLAY 111
DW + + ARS+R AL A+
Sbjct: 76 DWPTGIRTWARSYRAALTAH 95
>UniRef50_A1ZRG6 Cluster: Transcriptional regulator, TetR family;
n=1; Microscilla marina ATCC 23134|Rep: Transcriptional
regulator, TetR family - Microscilla marina ATCC 23134
Length = 209
Score = 34.7 bits (76), Expect = 3.0
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L+L N+ G + ++TR +A+ LG+ LY+H+++K+
Sbjct: 12 LELFNQHGSEKVSTRHVADALGISVGNLYYHYKDKQ 47
>UniRef50_A0W7D7 Cluster: Transcriptional regulator, TetR family;
n=1; Geobacter lovleyi SZ|Rep: Transcriptional
regulator, TetR family - Geobacter lovleyi SZ
Length = 203
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L ++ +GV GLT ++A G+ + +Y HFRNK+
Sbjct: 24 LSVIGRLGVSGLTIHEVALSAGMSEANIYRHFRNKQ 59
>UniRef50_A0R315 Cluster: TetR-family protein transcriptional
regulator; n=1; Mycobacterium smegmatis str. MC2
155|Rep: TetR-family protein transcriptional regulator -
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Length = 237
Score = 34.7 bits (76), Expect = 3.0
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
DLL G+D ++TR +A GVQ P +Y F +K
Sbjct: 21 DLLRAGGIDAVSTRAVATEAGVQPPTIYRQFGDK 54
>UniRef50_Q9KFW7 Cluster: BH0353 protein; n=1; Bacillus
halodurans|Rep: BH0353 protein - Bacillus halodurans
Length = 197
Score = 34.3 bits (75), Expect = 4.0
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 335 EVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
E G+ LT + +AE GV Q +Y+HFR+K
Sbjct: 22 EKGIHSLTLKSVAEGAGVTQGTVYYHFRSK 51
>UniRef50_Q9CFG3 Cluster: Transcriptional regulator; n=4;
Lactococcus lactis|Rep: Transcriptional regulator -
Lactococcus lactis subsp. lactis (Streptococcus lactis)
Length = 208
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+LL E+ + + RKLA RLG+ +LY+HF +K
Sbjct: 16 ELLEELTLTEFSMRKLASRLGMTVSSLYYHFSSK 49
>UniRef50_Q98GZ7 Cluster: Transcriptional regulator; n=1;
Mesorhizobium loti|Rep: Transcriptional regulator -
Rhizobium loti (Mesorhizobium loti)
Length = 214
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L+ E G +GLT RKLA+R+G ++Y +F +K+
Sbjct: 27 LVQEEGYEGLTIRKLAKRVGYAPMSVYSYFADKQ 60
>UniRef50_Q928H4 Cluster: Lin2558 protein; n=13; Listeria|Rep:
Lin2558 protein - Listeria innocua
Length = 202
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
DL E G ++TR++A+ + QPALY HF +K
Sbjct: 24 DLFMEKGYRAVSTREIAKIAKITQPALYHHFEDK 57
>UniRef50_Q82R52 Cluster: Putative TetR-family transcriptional
regulator; n=1; Streptomyces avermitilis|Rep: Putative
TetR-family transcriptional regulator - Streptomyces
avermitilis
Length = 208
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L ++++ G D L+ R LA+RLG LY HF N+
Sbjct: 11 LQIVDDEGADALSMRTLAQRLGSGTATLYRHFDNR 45
>UniRef50_Q6D8M2 Cluster: TetR-family transcriptional regulator;
n=24; Proteobacteria|Rep: TetR-family transcriptional
regulator - Erwinia carotovora subsp. atroseptica
(Pectobacterium atrosepticum)
Length = 199
Score = 34.3 bits (75), Expect = 4.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
++ E G + LT LAE+ GV +P +Y HF N+
Sbjct: 26 IIREEGTEALTLGHLAEQAGVTKPVVYDHFTNR 58
>UniRef50_Q5YZE8 Cluster: Putative transcriptional regulator; n=2;
Nocardia farcinica|Rep: Putative transcriptional
regulator - Nocardia farcinica
Length = 240
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LL E G D +T R +A LG+ PALY H+ ++
Sbjct: 25 LLAEQGPDAVTLRAIARTLGITAPALYRHYDSR 57
>UniRef50_Q5WJH4 Cluster: Transcriptional regulator; n=1; Bacillus
clausii KSM-K16|Rep: Transcriptional regulator -
Bacillus clausii (strain KSM-K16)
Length = 179
Score = 34.3 bits (75), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L + G +TR++A+ LG+ QP LY++F+ K
Sbjct: 12 LFMQQGYQATSTRQIADTLGITQPNLYYYFKKK 44
>UniRef50_Q2RT73 Cluster: Transcriptional Regulator, TetR family;
n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Transcriptional Regulator, TetR family - Rhodospirillum
rubrum (strain ATCC 11170 / NCIB 8255)
Length = 194
Score = 34.3 bits (75), Expect = 4.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+ L + G + LA+RLGV + YWHFR++
Sbjct: 19 LEALADGGATAVRIEALAKRLGVTKGGFYWHFRDR 53
>UniRef50_Q9AJL5 Cluster: VarR; n=2; Actinomycetales|Rep: VarR -
Streptomyces virginiae
Length = 247
Score = 34.3 bits (75), Expect = 4.0
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPRADDDW 165
LL+E G T R LA LGV ++YW+ NK E P A DW
Sbjct: 48 LLDEQGDAKFTMRVLATELGVTPMSVYWYIANKDDLMELALDAVAAEIKLPD-PAAGLDW 106
Query: 164 RSFLIGNARSFRQALLAY 111
R L A S+R+ ++++
Sbjct: 107 REDLRALALSWRRTMVSH 124
>UniRef50_Q0S1A2 Cluster: Transcriptional regulator, MalT family
protein; n=1; Rhodococcus sp. RHA1|Rep: Transcriptional
regulator, MalT family protein - Rhodococcus sp. (strain
RHA1)
Length = 235
Score = 34.3 bits (75), Expect = 4.0
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+L G +TR++AE +G++Q +LY HF NK
Sbjct: 30 ELFTTKGFAATSTRQIAEMVGIRQASLYHHFPNK 63
>UniRef50_A6G877 Cluster: Transcriptional regulatory protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Transcriptional
regulatory protein - Plesiocystis pacifica SIR-1
Length = 244
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L+ E G +G T R++A R+GV A Y HF ++
Sbjct: 37 LELIAERGPEGFTLREVARRVGVSHAAPYRHFADR 71
>UniRef50_A6F2N8 Cluster: Transcriptional regulator; n=1;
Marinobacter algicola DG893|Rep: Transcriptional
regulator - Marinobacter algicola DG893
Length = 212
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHF 255
L++L E G ++ R LA+++GV PALY HF
Sbjct: 26 LEILREHGDAAISLRALAKQIGVSAPALYRHF 57
>UniRef50_A5V191 Cluster: Transcriptional regulator, TetR family;
n=2; Roseiflexus|Rep: Transcriptional regulator, TetR
family - Roseiflexus sp. RS-1
Length = 202
Score = 34.3 bits (75), Expect = 4.0
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+L+ E G ++ +LA R+G+ +P LY HF NK
Sbjct: 23 ELVAEKGYGAMSMDELAARVGISKPTLYAHFANK 56
>UniRef50_A3V9K2 Cluster: Possible Transcriptional Regulator, TetR
family protein; n=1; Rhodobacterales bacterium
HTCC2654|Rep: Possible Transcriptional Regulator, TetR
family protein - Rhodobacterales bacterium HTCC2654
Length = 196
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ L +G D +TT+ LA+ +GV QPA++ HF K
Sbjct: 22 IQLSATMGPDRVTTQHLADAVGVTQPAIFRHFGTK 56
>UniRef50_A3TS77 Cluster: Putative transcriptional regulator; n=1;
Janibacter sp. HTCC2649|Rep: Putative transcriptional
regulator - Janibacter sp. HTCC2649
Length = 209
Score = 34.3 bits (75), Expect = 4.0
Identities = 28/98 (28%), Positives = 38/98 (38%)
Frame = -3
Query: 359 VPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKRXXXXXXXXXXXXENHTHSVPR 180
V + L + GVDGL+ R+LA LG +LY + NK +P
Sbjct: 3 VEAIRLADREGVDGLSMRRLAGALGAGAMSLYHYVANKEELLDAMIDVVF---EEIELPA 59
Query: 179 ADDDWRSFLIGNARSFRQALLAYRQHNGTMCSSCRSRP 66
DW+S + S RQ L + G M S P
Sbjct: 60 DGADWQSAMRQRTESARQVLARHPWAIGLMESRTSPGP 97
>UniRef50_A3I766 Cluster: Transcriptional regulator, TetR family
protein; n=1; Bacillus sp. B14905|Rep: Transcriptional
regulator, TetR family protein - Bacillus sp. B14905
Length = 193
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L L+++ G TT+ +AE GV + L+ HF NKR
Sbjct: 15 LQLISDKGYTAATTKTIAELAGVNEVTLFRHFGNKR 50
>UniRef50_A1U6A9 Cluster: Transcriptional regulator, TetR family;
n=1; Marinobacter aquaeolei VT8|Rep: Transcriptional
regulator, TetR family - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 238
Score = 34.3 bits (75), Expect = 4.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 335 EVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
E GV + ++A GV + A+YWHFRNK+
Sbjct: 62 EKGVARASLEEIARTAGVTRGAVYWHFRNKQ 92
>UniRef50_A1G4K2 Cluster: Transcriptional regulator, TetR family;
n=2; Salinispora|Rep: Transcriptional regulator, TetR
family - Salinispora arenicola CNS205
Length = 223
Score = 34.3 bits (75), Expect = 4.0
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
+L++EVG +GLTT LAER V ++Y F +KR
Sbjct: 33 ELVDEVGYEGLTTTLLAERAEVAIGSVYQFFPDKR 67
>UniRef50_Q88ZN5 Cluster: Transcription regulator; n=1;
Lactobacillus plantarum|Rep: Transcription regulator -
Lactobacillus plantarum
Length = 229
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LDL E G + + TR++AER GV + L+ +F NK
Sbjct: 33 LDLFAEKGYEEVGTREIAERAGVAEGTLFHNFVNK 67
>UniRef50_Q81U36 Cluster: Transcriptional regulator, TetR family;
n=9; Bacillus cereus group|Rep: Transcriptional
regulator, TetR family - Bacillus anthracis
Length = 193
Score = 33.9 bits (74), Expect = 5.3
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+ E G++ ++ +A+ +G+ +PA+Y+HF +K
Sbjct: 18 LMAEHGIEKMSLSMIAKEVGISKPAIYYHFSSK 50
>UniRef50_Q74GP1 Cluster: Transcriptional regulator, TetR family;
n=2; Desulfuromonadales|Rep: Transcriptional regulator,
TetR family - Geobacter sulfurreducens
Length = 208
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ L NE G +TT +A + + LY+HFRNK
Sbjct: 12 ITLFNEKGTKAVTTNHIAAAMEISPGNLYYHFRNK 46
>UniRef50_Q6N722 Cluster: Possible transcriptional regulator, TetR
family; n=2; Proteobacteria|Rep: Possible
transcriptional regulator, TetR family -
Rhodopseudomonas palustris
Length = 230
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ L+ E+G + RKL +R+G A+ +HF+NK
Sbjct: 35 VSLMEELGEAAFSVRKLGDRVGCDPMAILYHFKNK 69
>UniRef50_Q6LR00 Cluster: Hypothetical transcriptional regulator;
n=2; Photobacterium profundum|Rep: Hypothetical
transcriptional regulator - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 210
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LDL N G+ ++T +A +G+ LY+HFR K
Sbjct: 12 LDLFNRNGISQVSTLIIATEMGISPGNLYYHFRGK 46
>UniRef50_Q7D614 Cluster: Transcriptional regulator, TetR family;
n=8; Mycobacterium tuberculosis complex|Rep:
Transcriptional regulator, TetR family - Mycobacterium
tuberculosis
Length = 225
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNKR 243
G +TR +A +GV+QPA+Y HF KR
Sbjct: 39 GYSSTSTRDIAAAVGVEQPAIYKHFSAKR 67
>UniRef50_Q1MXX0 Cluster: Putative transcriptional regulator; n=1;
Oceanobacter sp. RED65|Rep: Putative transcriptional
regulator - Oceanobacter sp. RED65
Length = 212
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L ++ G+D L+ RKLA+ L V+ +LY H +NK
Sbjct: 14 LKLADQHGLDQLSMRKLADALNVKAMSLYNHIQNK 48
>UniRef50_Q0LEE0 Cluster: Regulatory protein, TetR; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Regulatory
protein, TetR - Herpetosiphon aurantiacus ATCC 23779
Length = 191
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L N+ G ++T +AE + LY+HFRNK
Sbjct: 12 LELFNQKGTAEVSTNHIAEACSISPGNLYYHFRNK 46
>UniRef50_Q03ZI0 Cluster: Transcriptional regulator; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Transcriptional regulator - Leuconostoc
mesenteroides subsp. mesenteroides (strain ATCC 8293
/NCDO 523)
Length = 194
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
G + TTR +A+++ + QPALY HF +K
Sbjct: 27 GFEQTTTRDIAKKVNISQPALYHHFGDK 54
>UniRef50_A6W9T1 Cluster: Regulatory protein TetR; n=3;
Actinomycetales|Rep: Regulatory protein TetR -
Kineococcus radiotolerans SRS30216
Length = 194
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWH 258
+++++VG GLT +A+RLGV+ P+LY H
Sbjct: 17 EVVDDVGYAGLTMGLVADRLGVRAPSLYKH 46
>UniRef50_A6UEY8 Cluster: Transcriptional regulator, TetR family;
n=4; Rhizobiaceae|Rep: Transcriptional regulator, TetR
family - Sinorhizobium medicae WSM419
Length = 222
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
GV T ++A+ GV + A+YWHF NK
Sbjct: 27 GVPNTTLEEVAKEAGVTRGAIYWHFANK 54
>UniRef50_A6Q3N1 Cluster: Transcriptional regulator, TetR family;
n=1; Nitratiruptor sp. SB155-2|Rep: Transcriptional
regulator, TetR family - Nitratiruptor sp. (strain
SB155-2)
Length = 207
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LDL+ E G + R +A+ +G+++ A+Y HF NK
Sbjct: 22 LDLIAEHGYSKASVRMIAKAVGIRESAIYNHFANK 56
>UniRef50_A6P7Z6 Cluster: Transcriptional regulator, TetR family;
n=1; Shewanella sediminis HAW-EB3|Rep: Transcriptional
regulator, TetR family - Shewanella sediminis HAW-EB3
Length = 168
Score = 33.9 bits (74), Expect = 5.3
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
+L+ GVD L+ L+ +GV + + YWHF++++
Sbjct: 1 MLSNQGVDKLSIGNLSRTVGVAKTSFYWHFKDRQ 34
>UniRef50_A6CWX3 Cluster: Transcriptional regulator, TetR family
protein; n=1; Vibrio shilonii AK1|Rep: Transcriptional
regulator, TetR family protein - Vibrio shilonii AK1
Length = 210
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L NE G +TT +A LG+ LY++FRNK
Sbjct: 12 LKLFNEKGERVITTNHIAAHLGMSPGNLYYYFRNK 46
>UniRef50_A5VLL5 Cluster: Transcriptional regulator, TetR family;
n=2; Lactobacillus reuteri|Rep: Transcriptional
regulator, TetR family - Lactobacillus reuteri F275
Length = 200
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L + G +TR +A+++G+ QPALY HF +K
Sbjct: 21 LFLQKGFGETSTRDIAKQIGITQPALYHHFSDK 53
>UniRef50_A3Y7R2 Cluster: Regulatory protein, TetR; n=1; Marinomonas
sp. MED121|Rep: Regulatory protein, TetR - Marinomonas
sp. MED121
Length = 236
Score = 33.9 bits (74), Expect = 5.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L L NE G ++T LA +G+ LY+HF+NK+
Sbjct: 28 LALFNEEGEHKVSTNHLAAHMGMSTGNLYYHFKNKQ 63
>UniRef50_A1T5J2 Cluster: Transcriptional regulator, TetR family;
n=2; Mycobacterium|Rep: Transcriptional regulator, TetR
family - Mycobacterium vanbaalenii (strain DSM 7251 /
PYR-1)
Length = 189
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L + GV G + + +A+RLGV + A+Y+ F +K
Sbjct: 20 LELFADHGVSGTSLQMIADRLGVTKAAVYYQFHSK 54
>UniRef50_A1SNW1 Cluster: Regulatory protein, TetR; n=1;
Nocardioides sp. JS614|Rep: Regulatory protein, TetR -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 258
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+ E GV+ LTTR++AE GV +LY +F +K
Sbjct: 70 LVVEHGVEALTTREIAEAAGVPVASLYQYFADK 102
>UniRef50_A1IEJ9 Cluster: Putative transcriptional regulator, TetR
family; n=1; Candidatus Desulfococcus oleovorans
Hxd3|Rep: Putative transcriptional regulator, TetR
family - Candidatus Desulfococcus oleovorans Hxd3
Length = 223
Score = 33.9 bits (74), Expect = 5.3
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LD++ + G + L+ RK+A RLGV LY ++ NK
Sbjct: 23 LDIIIKDGFENLSLRKIASRLGVTPTTLYNYYSNK 57
>UniRef50_A1ICN4 Cluster: Putative transcriptional regulator, TetR
family; n=1; Candidatus Desulfococcus oleovorans
Hxd3|Rep: Putative transcriptional regulator, TetR
family - Candidatus Desulfococcus oleovorans Hxd3
Length = 206
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L E G DG TTR +A+ +G+ LY+H+ K+
Sbjct: 26 LFAEYGYDGTTTRMIAKDVGIDISTLYYHWGEKK 59
>UniRef50_A1BCK3 Cluster: Transcriptional regulator, TetR family;
n=4; Chlorobium/Pelodictyon group|Rep: Transcriptional
regulator, TetR family - Chlorobium phaeobacteroides
(strain DSM 266)
Length = 247
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 341 LNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+NE G L+ RK+A LG+ PA+Y +F ++
Sbjct: 28 INEFGASSLSLRKIARELGITAPAIYNYFPDR 59
>UniRef50_A0W7Y5 Cluster: Transcriptional regulator, TetR family
precursor; n=1; Geobacter lovleyi SZ|Rep:
Transcriptional regulator, TetR family precursor -
Geobacter lovleyi SZ
Length = 200
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L + G + R+L E GV +P LY++F+NK
Sbjct: 22 LQLFSSKGYAATSVRELVEAAGVTKPVLYYYFKNK 56
>UniRef50_A0H3B4 Cluster: Regulatory protein, TetR; n=2;
Chloroflexus|Rep: Regulatory protein, TetR -
Chloroflexus aggregans DSM 9485
Length = 198
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+ G DG+ R++A+ +G+ + LY HFR+K
Sbjct: 21 LIVTYGYDGIAMREIADAVGLSKAGLYHHFRDK 53
>UniRef50_P0ACT1 Cluster: HTH-type transcriptional regulator acrR;
n=48; Enterobacteriaceae|Rep: HTH-type transcriptional
regulator acrR - Shigella flexneri
Length = 215
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L ++ GV + ++A+ GV + A+YWHF++K
Sbjct: 21 LRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDK 55
>UniRef50_Q9RSH6 Cluster: Transcriptional regulator, TetR family;
n=2; Deinococcus|Rep: Transcriptional regulator, TetR
family - Deinococcus radiodurans
Length = 204
Score = 33.5 bits (73), Expect = 7.0
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
G G++ R++AE +GV +PALY H+ +K
Sbjct: 38 GYHGVSMREVAEAVGVTKPALYHHYADK 65
>UniRef50_Q92DG8 Cluster: Lin0845 protein; n=13; Listeria|Rep:
Lin0845 protein - Listeria innocua
Length = 184
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L E G DG ++A+ +G++ P+LY HF +K
Sbjct: 11 LTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFPSK 45
>UniRef50_Q89SZ6 Cluster: Transcriptional regulatory protein; n=1;
Bradyrhizobium japonicum|Rep: Transcriptional regulatory
protein - Bradyrhizobium japonicum
Length = 231
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L + G G + R+LA R+G+++ +LY HF K
Sbjct: 25 LNLFAQSGYGGASMRELARRVGIRESSLYNHFAGK 59
>UniRef50_Q82QS4 Cluster: Putative TetR-family transcriptional
regulator; n=1; Streptomyces avermitilis|Rep: Putative
TetR-family transcriptional regulator - Streptomyces
avermitilis
Length = 214
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L++L E G GLT +K+ +R GV + + +HF +K
Sbjct: 26 LEILAEEGYRGLTVKKVGDRAGVSRGMVNYHFMSK 60
>UniRef50_Q5R0R8 Cluster: Enzyme related to eukaryotic
diacylglycerol kinase; n=1; Idiomarina loihiensis|Rep:
Enzyme related to eukaryotic diacylglycerol kinase -
Idiomarina loihiensis
Length = 299
Score = 33.5 bits (73), Expect = 7.0
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = +1
Query: 625 IGPGVFYGGQNSVDGVSRRSDGSLNELCL 711
+G G FYGG N VD S DG LN CL
Sbjct: 191 VGNGRFYGGGNIVDEDSTLLDGQLNLFCL 219
>UniRef50_Q39GC4 Cluster: Transcriptional regulator, TetR family;
n=1; Burkholderia sp. 383|Rep: Transcriptional
regulator, TetR family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 231
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L E G G + +++AE LGV + A+Y++F+NK
Sbjct: 20 LFIEKGFGGASMQEIAESLGVTRTAVYYYFKNK 52
>UniRef50_Q38Z06 Cluster: Putative transcriptional regulator, TetR
family; n=1; Lactobacillus sakei subsp. sakei 23K|Rep:
Putative transcriptional regulator, TetR family -
Lactobacillus sakei subsp. sakei (strain 23K)
Length = 223
Score = 33.5 bits (73), Expect = 7.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 386 QSCSRIQ*SVPXLDLLNEVG-VDGLTTRKLAERLGVQQPALYWHFRNKR 243
Q+ S Q + +++ G V+ L+ RK+A +L + YWHF NK+
Sbjct: 4 QTISAAQITAAAFEIMQTGGTVEQLSIRKIAAKLHIGVATFYWHFENKQ 52
>UniRef50_Q2SA74 Cluster: Transcriptional regulator; n=1; Hahella
chejuensis KCTC 2396|Rep: Transcriptional regulator -
Hahella chejuensis (strain KCTC 2396)
Length = 211
Score = 33.5 bits (73), Expect = 7.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L +VG D ++ R LA +GV Q A Y HF +K
Sbjct: 28 LTQLKQVGPDKISLRALAREIGVSQTAPYRHFADK 62
>UniRef50_Q2S144 Cluster: Hypothetical transcriptional regulator,
TetR family; n=1; Salinibacter ruber DSM 13855|Rep:
Hypothetical transcriptional regulator, TetR family -
Salinibacter ruber (strain DSM 13855)
Length = 212
Score = 33.5 bits (73), Expect = 7.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L E G++ TTR++AE G + LY HF K
Sbjct: 35 LTLFAENGIEATTTREIAEHAGAAEGTLYRHFDGK 69
>UniRef50_Q2GA94 Cluster: Transcriptional regulator, TetR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, TetR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 204
Score = 33.5 bits (73), Expect = 7.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNKR 243
G +GL+ RKLAE +GV A Y HF ++R
Sbjct: 36 GHEGLSIRKLAEEIGVSPGAPYHHFPDRR 64
>UniRef50_Q21L53 Cluster: Regulatory protein, TetR; n=1;
Saccharophagus degradans 2-40|Rep: Regulatory protein,
TetR - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 224
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L++L ++ ++ RKLA +GV A+Y HF NK
Sbjct: 26 LEMLPSTTIESISLRKLATHIGVAATAVYNHFSNK 60
>UniRef50_Q0RKT9 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 220
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFR 252
L ++ G+D LT R +A+ LGV PA+++H R
Sbjct: 6 LRVVERGGLDRLTVRAVADELGVTPPAVHYHLR 38
>UniRef50_A6W686 Cluster: Transcriptional regulator, TetR family;
n=1; Kineococcus radiotolerans SRS30216|Rep:
Transcriptional regulator, TetR family - Kineococcus
radiotolerans SRS30216
Length = 238
Score = 33.5 bits (73), Expect = 7.0
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
LL E G DGLT LA RL V ALY H +K+
Sbjct: 42 LLEERGQDGLTMAALARRLDVAPSALYNHVADKQ 75
>UniRef50_A5I3Y4 Cluster: TetR-family regulatory protein; n=3;
Clostridium botulinum|Rep: TetR-family regulatory
protein - Clostridium botulinum A str. ATCC 3502
Length = 197
Score = 33.5 bits (73), Expect = 7.0
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 359 VPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ L L NE G D + RK+A V A Y HF+NK
Sbjct: 17 IEGLKLFNEEGADKFSLRKVAALCNVSHSAPYKHFKNK 54
>UniRef50_A3J8M4 Cluster: Transcriptional regulator; n=4;
Gammaproteobacteria|Rep: Transcriptional regulator -
Marinobacter sp. ELB17
Length = 234
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L N+ G ++T +A L + LY+HFRNK
Sbjct: 23 LQLFNQSGERAISTNHIAAELAISPGNLYYHFRNK 57
>UniRef50_A1GBH9 Cluster: Transcriptional regulator, TetR family
precursor; n=2; Salinispora|Rep: Transcriptional
regulator, TetR family precursor - Salinispora arenicola
CNS205
Length = 218
Score = 33.5 bits (73), Expect = 7.0
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHF 255
+L+ E+G + ++TR LAER GV+ +++HF
Sbjct: 22 ELIGELGWNAVSTRTLAERAGVRSGLVHYHF 52
>UniRef50_A0LGB1 Cluster: Transcriptional regulator, TetR family
precursor; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
Transcriptional regulator, TetR family precursor -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 228
Score = 33.5 bits (73), Expect = 7.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L + G +G R++ E GV +P LY++F+NK
Sbjct: 43 LFAQRGYNGTAVREIVELAGVTKPTLYYYFKNK 75
>UniRef50_A0JS18 Cluster: Transcriptional regulator, TetR family;
n=4; Actinomycetales|Rep: Transcriptional regulator,
TetR family - Arthrobacter sp. (strain FB24)
Length = 239
Score = 33.5 bits (73), Expect = 7.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L + G++ L+ R+LA+ LGV ALY H NK
Sbjct: 25 LADAAGIESLSMRRLAQELGVVPMALYKHVANK 57
>UniRef50_Q8TLS7 Cluster: Transcriptional regulator, TetR family;
n=3; Methanomicrobia|Rep: Transcriptional regulator,
TetR family - Methanosarcina acetivorans
Length = 221
Score = 33.5 bits (73), Expect = 7.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+++ E G T +A RL V +PALY +F+NK
Sbjct: 24 LEVMYEKGYCNTTMEDIARRLDVSKPALYRYFKNK 58
>UniRef50_P39897 Cluster: HTH-type transcriptional regulator mtrR;
n=10; Neisseria|Rep: HTH-type transcriptional regulator
mtrR - Neisseria gonorrhoeae
Length = 210
Score = 33.5 bits (73), Expect = 7.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+ G+ + ++A+ GV + ALYWHF+NK
Sbjct: 20 LETFYRKGIARTSLNEIAQAAGVTRGALYWHFKNK 54
>UniRef50_UPI0000510166 Cluster: COG1309: Transcriptional regulator;
n=1; Brevibacterium linens BL2|Rep: COG1309:
Transcriptional regulator - Brevibacterium linens BL2
Length = 187
Score = 33.1 bits (72), Expect = 9.2
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = -3
Query: 374 RIQ*SVPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
R+Q ++LL + G G++ ++A+R GV +P + +HF +K
Sbjct: 9 RVQIIDVTIELLADHGYSGVSLSQIADRAGVTKPTVLYHFTDK 51
>UniRef50_Q9KBG3 Cluster: Transcriptional regulator; n=1; Bacillus
halodurans|Rep: Transcriptional regulator - Bacillus
halodurans
Length = 196
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -3
Query: 359 VPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
+ +DL++E G +G+TT ++A G + L+ HF +K+
Sbjct: 14 IAAIDLISERGYNGVTTLEIAAAAGFSEKTLFRHFGSKQ 52
>UniRef50_Q9A771 Cluster: Transcriptional regulator, TetR family;
n=3; Alphaproteobacteria|Rep: Transcriptional regulator,
TetR family - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 186
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
GVD TT+ +A R GV + A+Y H+++K
Sbjct: 19 GVDAATTKTIAARAGVSEGAIYRHWKSK 46
>UniRef50_Q6D8M6 Cluster: TetR-family transcriptional regulator;
n=1; Pectobacterium atrosepticum|Rep: TetR-family
transcriptional regulator - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 190
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHF 255
++L E G++ +TTR+LAE +G+ + LY +F
Sbjct: 17 IELFIEKGIEKVTTRELAEHVGISRSHLYHYF 48
>UniRef50_Q3BMD8 Cluster: Transcriptional regulator, TetR family;
n=3; Gammaproteobacteria|Rep: Transcriptional regulator,
TetR family - Xanthomonas campestris pv. vesicatoria
(strain 85-10)
Length = 305
Score = 33.1 bits (72), Expect = 9.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LL +VGV+ L+T + G+ PALY +F NK
Sbjct: 101 LLGDVGVERLSTNLVCAHAGLTPPALYRYFPNK 133
>UniRef50_Q39ZX6 Cluster: TetR family transcriptional regulator;
n=1; Pelobacter carbinolicus DSM 2380|Rep: TetR family
transcriptional regulator - Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1)
Length = 202
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+L + G T ++A GV + A+YWHF++K
Sbjct: 21 LELFHAKGYTRTTLEEIARSAGVTRGAIYWHFKDK 55
>UniRef50_Q3W3C5 Cluster: Regulatory protein, TetR; n=1; Frankia sp.
EAN1pec|Rep: Regulatory protein, TetR - Frankia sp.
EAN1pec
Length = 217
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LDL E GV + + +A+ +GV + A+Y H+++K
Sbjct: 44 LDLFTERGVSATSLQMIADAMGVTKAAVYHHYKSK 78
>UniRef50_Q1MYE0 Cluster: Transcriptional regulator; n=1;
Oceanobacter sp. RED65|Rep: Transcriptional regulator -
Oceanobacter sp. RED65
Length = 209
Score = 33.1 bits (72), Expect = 9.2
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
L + + GVD L+ R +A LGV Q A Y HF++K+
Sbjct: 5 LQRIAKEGVDKLSLRAVARDLGVSQTAPYRHFKDKQ 40
>UniRef50_Q0RMZ4 Cluster: Putative TetR-family transcriptional
regulator; n=2; Frankia alni ACN14a|Rep: Putative
TetR-family transcriptional regulator - Frankia alni
(strain ACN14a)
Length = 202
Score = 33.1 bits (72), Expect = 9.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L ++ GV+GLT R+L++ LGV A Y H K
Sbjct: 34 LSIIERDGVEGLTMRRLSQSLGVSLGATYKHVATK 68
>UniRef50_A7CCD1 Cluster: Transcriptional regulator, TetR family;
n=2; Ralstonia pickettii|Rep: Transcriptional regulator,
TetR family - Ralstonia pickettii 12D
Length = 275
Score = 33.1 bits (72), Expect = 9.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 347 DLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
D+ GV + +A+ GV + A+YWHFRNK
Sbjct: 74 DVFYARGVARTSLSDIAQAAGVTRGAIYWHFRNK 107
>UniRef50_A7B9X0 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 262
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L+ E G +G + R L R+G+ PA+ +HF +K
Sbjct: 28 LIAERGYNGFSLRDLGRRVGISHPAVVYHFPSK 60
>UniRef50_A6W488 Cluster: Transcriptional regulator, TetR family;
n=2; Actinomycetales|Rep: Transcriptional regulator,
TetR family - Kineococcus radiotolerans SRS30216
Length = 243
Score = 33.1 bits (72), Expect = 9.2
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
LL E G +TTR +AE GVQ PA+Y F +K
Sbjct: 27 LLGEHGPAAVTTRGVAEAAGVQAPAIYRLFGDK 59
>UniRef50_A6ULL0 Cluster: Transcriptional regulator, TetR family;
n=1; Sinorhizobium medicae WSM419|Rep: Transcriptional
regulator, TetR family - Sinorhizobium medicae WSM419
Length = 205
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L L E G+D + +LA+ L V + + YWHF ++
Sbjct: 29 LAALAEGGIDSVRVERLAKSLNVSKGSFYWHFSDR 63
>UniRef50_A6G672 Cluster: Transcriptional regulatory protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Transcriptional
regulatory protein - Plesiocystis pacifica SIR-1
Length = 210
Score = 33.1 bits (72), Expect = 9.2
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNKR 243
LL G+D LTT +AER GV LY +F NK+
Sbjct: 29 LLVSRGLDELTTAAVAERAGVSVGTLYQYFPNKQ 62
>UniRef50_A3YF17 Cluster: Putative transcriptional regulator; n=1;
Marinomonas sp. MED121|Rep: Putative transcriptional
regulator - Marinomonas sp. MED121
Length = 222
Score = 33.1 bits (72), Expect = 9.2
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -3
Query: 359 VPXLDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
V L LL E ++ ++ RKLA+ +GV A+Y HF +K
Sbjct: 18 VEMLSLLEEQTLEEISLRKLAKHVGVTPTAVYNHFADK 55
>UniRef50_A3HWG2 Cluster: Transcriptional regulator, TetR family
protein; n=1; Algoriphagus sp. PR1|Rep: Transcriptional
regulator, TetR family protein - Algoriphagus sp. PR1
Length = 215
Score = 33.1 bits (72), Expect = 9.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+ L NE G+ +T+R +A R+G+ L +H++ K
Sbjct: 16 ITLYNEQGIQNVTSRHIASRMGISHGNLDYHYKTK 50
>UniRef50_A1ZGE6 Cluster: Transcriptional regulator, TetR family
protein; n=1; Microscilla marina ATCC 23134|Rep:
Transcriptional regulator, TetR family protein -
Microscilla marina ATCC 23134
Length = 229
Score = 33.1 bits (72), Expect = 9.2
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = -3
Query: 350 LDLLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
+DL++E+G + T +KLA ++ + ++Y +F NK
Sbjct: 34 IDLIDELGFEDFTFKKLANQISSTEASIYRYFENK 68
>UniRef50_A0VBN2 Cluster: Transcriptional regulator, TetR family;
n=4; cellular organisms|Rep: Transcriptional regulator,
TetR family - Delftia acidovorans SPH-1
Length = 256
Score = 33.1 bits (72), Expect = 9.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 344 LLNEVGVDGLTTRKLAERLGVQQPALYWHFRNK 246
L NE G + +A RLGV +P LY++ +NK
Sbjct: 57 LFNERGFSATSLDDIAARLGVSKPTLYYYVKNK 89
>UniRef50_Q9AIU0 Cluster: HTH-type transcriptional regulator ttgR;
n=15; Pseudomonas|Rep: HTH-type transcriptional
regulator ttgR - Pseudomonas putida
Length = 210
Score = 33.1 bits (72), Expect = 9.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
GV T +AE GV + A+YWHF NK
Sbjct: 28 GVARTTLADIAELAGVTRGAIYWHFNNK 55
>UniRef50_Q9KVD2 Cluster: HTH-type protein slmA; n=72;
Gammaproteobacteria|Rep: HTH-type protein slmA - Vibrio
cholerae
Length = 196
Score = 33.1 bits (72), Expect = 9.2
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3
Query: 329 GVDGLTTRKLAERLGVQQPALYWHFRNK 246
G +TT KLA+++GV + ALY HF +K
Sbjct: 26 GASRITTAKLAKQVGVSEAALYRHFPSK 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,117,109
Number of Sequences: 1657284
Number of extensions: 18059915
Number of successful extensions: 46961
Number of sequences better than 10.0: 225
Number of HSP's better than 10.0 without gapping: 44777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46938
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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