Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A16
         (819 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620...    97   2e-20
08_01_0773 - 7481445-7481537,7481628-7481831                           30   1.9  
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917...    29   4.4  
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453...    29   5.9  

>01_07_0248 + 42261373-42261609,42261733-42261905,42261986-42262058,
            42262148-42262282,42262352-42262562,42262886-42263034,
            42263169-42263267,42263821-42263989,42264176-42264308,
            42264600-42264694,42264774-42264882,42265136-42265295,
            42265433-42265594,42265814-42265985,42266254-42266402,
            42266914-42266951,42267779-42267839,42267913-42268155,
            42268233-42268315,42269521-42269609,42270449-42270495,
            42270576-42270656,42270737-42270899,42271077-42271267,
            42271691-42271762
          Length = 1097

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
 Frame = -2

Query: 743  IXXNXXFIARIDCHKSLIQHXTKLYLCDXXXXXXXXXXXXXLYDFQNFGFIKLSNPLPLE 564
            I  N  ++   D   +LIQH T+LYL +             L  F NF  I+LS P PL+
Sbjct: 496  IVKNCTYVGLADEAFALIQHNTRLYLVNVVNISKELMYQQALCRFGNFNAIQLSEPAPLQ 555

Query: 563  ELFVLGLNGSTQNSEQDSELGDTGEMAQHMTQLLLSKRAMLYEYFSLEVNGEGEXXXXXX 384
            EL V+ L      S++  +  +  E+A+  T++L     M+ EYFS+ ++ +G+      
Sbjct: 556  ELLVMALKDDELMSDEKDD--EKLEIAEVNTEILKENAEMINEYFSIHIDQDGKLTRLPV 613

Query: 383  XLDGHAPFVGALPTYLVRLVTEVNWDSEKECFETFCRQTAKFYA-----QPNPDPN 231
             LD + P +  LP +++ L  +V WD EKECF T       FYA      PNP  N
Sbjct: 614  VLDQYTPDMDRLPEFVLALGNDVTWDDEKECFRTVASAVGNFYALHPPILPNPSGN 669



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = -2

Query: 197 EHVIFPAIRKYFLPPSSFISNGAILQIASLNDLYKVFER 81
           +HV+FP++R +  PP S  ++G  +Q+ASL  LYK+FER
Sbjct: 717 QHVLFPSMRLFLKPPKSMATDGTFVQVASLEKLYKIFER 755


>08_01_0773 - 7481445-7481537,7481628-7481831
          Length = 98

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 179 QGISRALVSCAPTTRSRH*GPD*VEHKTWPSVCRKSQSTP 298
           QG++  +    PT +  H G     +  WPS+CR ++ TP
Sbjct: 29  QGLACGVAEVLPTNKLAHQGGH--RYAKWPSLCRTTRGTP 66


>03_05_0697 +
           26888791-26888861,26890468-26890579,26891561-26891757,
           26892215-26892266,26893530-26893795,26894007-26894229,
           26895154-26895327,26895408-26895485,26895566-26895817,
           26896138-26898204,26899477-26901322,26901474-26901574,
           26902179-26902535,26902681-26902799,26903558-26903559,
           26903630-26903662,26903709-26903841,26904285-26904537,
           26905688-26905912,26906401-26906466,26907373-26907471,
           26908528-26908545,26908546-26908893,26909878-26910354
          Length = 2522

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = -1

Query: 654 KIDGGIVLRDITIRFSKLRFHQTVESIAIGRIICSWSEREHSKLRTGF 511
           ++ G   LRD+TI+FSK     ++ESI+IG I  S+  +   KL  GF
Sbjct: 45  RVAGFNCLRDVTIKFSK----GSLESISIGEIKLSF-RKSLVKLSFGF 87


>01_04_0053 -
           15444421-15444747,15444905-15445116,15445198-15445377,
           15445572-15445836,15446308-15446522,15446611-15446784,
           15446872-15447010,15447523-15447786
          Length = 591

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 422 PEKSIRRALRVCSTIVGSYVEPFLLYLRAQNPVRSFECSRSDQ 550
           P K I   L     +    VE +L YLR + P  +F+C+  +Q
Sbjct: 181 PSKRIVLLLNKIDLVPKESVEKWLTYLREEMPTVAFKCNTQEQ 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,006,181
Number of Sequences: 37544
Number of extensions: 373462
Number of successful extensions: 873
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)