Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A16
         (819 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069160-1|AAL39305.1|  504|Drosophila melanogaster GH18717p pro...   162   6e-40
AE013599-613|AAF59117.1|  664|Drosophila melanogaster CG11482-PA...   162   6e-40
AF068257-1|AAC19117.1|  663|Drosophila melanogaster mutL homolog...   160   2e-39

>AY069160-1|AAL39305.1|  504|Drosophila melanogaster GH18717p
           protein.
          Length = 504

 Score =  162 bits (393), Expect = 6e-40
 Identities = 86/219 (39%), Positives = 121/219 (55%)
 Frame = -2

Query: 734 NXXFIARIDCHKSLIQHXTKLYLCDXXXXXXXXXXXXXLYDFQNFGFIKLSNPLPLEELF 555
           N  ++  +D  ++L QH T+LY+C+             +Y+FQN   I +S PLPL+EL 
Sbjct: 291 NLVYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRMIYEFQNCSEITISPPLPLKELL 350

Query: 554 VLGLNGSTQNSEQDSELGDTGEMAQHMTQLLLSKRAMLYEYFSLEVNGEGEXXXXXXXLD 375
           +L L   ++ +    E GD  E+A     +LL K  ++ EYF L ++ +G        L 
Sbjct: 351 ILSLE--SEAAGWTPEDGDKAELADGAADILLKKAPIMREYFGLRISEDGMLESLPSLLH 408

Query: 374 GHAPFVGALPTYLVRLVTEVNWDSEKECFETFCRQTAKFYAQPNPDPNVESVSSEHRRQE 195
            H P V  LP YL+RL TEV+W+ E  CFETFCR+TA+FYAQ +      +  S     E
Sbjct: 409 QHRPCVAHLPVYLLRLATEVDWEQETRCFETFCRETARFYAQLDWREGATAGFSRW-TME 467

Query: 194 HVIFPAIRKYFLPPSSFISNGAILQIASLNDLYKVFERC 78
           HV+FPA +KY LPP        I ++ +L  LYKVFERC
Sbjct: 468 HVLFPAFKKYLLPPPRI--KDQIYELTNLPTLYKVFERC 504


>AE013599-613|AAF59117.1|  664|Drosophila melanogaster CG11482-PA
            protein.
          Length = 664

 Score =  162 bits (393), Expect = 6e-40
 Identities = 86/219 (39%), Positives = 121/219 (55%)
 Frame = -2

Query: 734  NXXFIARIDCHKSLIQHXTKLYLCDXXXXXXXXXXXXXLYDFQNFGFIKLSNPLPLEELF 555
            N  ++  +D  ++L QH T+LY+C+             +Y+FQN   I +S PLPL+EL 
Sbjct: 451  NLVYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRMIYEFQNCSEITISPPLPLKELL 510

Query: 554  VLGLNGSTQNSEQDSELGDTGEMAQHMTQLLLSKRAMLYEYFSLEVNGEGEXXXXXXXLD 375
            +L L   ++ +    E GD  E+A     +LL K  ++ EYF L ++ +G        L 
Sbjct: 511  ILSLE--SEAAGWTPEDGDKAELADGAADILLKKAPIMREYFGLRISEDGMLESLPSLLH 568

Query: 374  GHAPFVGALPTYLVRLVTEVNWDSEKECFETFCRQTAKFYAQPNPDPNVESVSSEHRRQE 195
             H P V  LP YL+RL TEV+W+ E  CFETFCR+TA+FYAQ +      +  S     E
Sbjct: 569  QHRPCVAHLPVYLLRLATEVDWEQETRCFETFCRETARFYAQLDWREGATAGFSRW-TME 627

Query: 194  HVIFPAIRKYFLPPSSFISNGAILQIASLNDLYKVFERC 78
            HV+FPA +KY LPP        I ++ +L  LYKVFERC
Sbjct: 628  HVLFPAFKKYLLPPPRI--KDQIYELTNLPTLYKVFERC 664


>AF068257-1|AAC19117.1|  663|Drosophila melanogaster mutL homolog
            protein.
          Length = 663

 Score =  160 bits (389), Expect = 2e-39
 Identities = 85/219 (38%), Positives = 118/219 (53%)
 Frame = -2

Query: 734  NXXFIARIDCHKSLIQHXTKLYLCDXXXXXXXXXXXXXLYDFQNFGFIKLSNPLPLEELF 555
            N  ++  +D  ++L QH T+LY+C+             +Y+FQN   I +  PLPL+EL 
Sbjct: 451  NLVYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRMIYEFQNCSEITICPPLPLKELL 510

Query: 554  VLGLNGSTQNSEQDSELGDTGEMAQHMTQLLLSKRAMLYEYFSLEVNGEGEXXXXXXXLD 375
            +L L         + E  D  E+A     +LL K  ++ EYF L ++ +G        L 
Sbjct: 511  ILSLESRAAGWTPEDE--DKAELADGAADILLKKAPIMREYFGLRISEDGMLESLPSLLH 568

Query: 374  GHAPFVGALPTYLVRLVTEVNWDSEKECFETFCRQTAKFYAQPNPDPNVESVSSEHRRQE 195
             H P V  LP YL+RL TEV+W+ E  CFETFCR+TA+FYAQ +      +V S     E
Sbjct: 569  QHRPCVAHLPVYLLRLATEVDWEQETRCFETFCRETARFYAQLDWREGATAVFSRW-TME 627

Query: 194  HVIFPAIRKYFLPPSSFISNGAILQIASLNDLYKVFERC 78
            HV+FPA +KY LPP        I ++ +L  LYKVFERC
Sbjct: 628  HVLFPAFKKYLLPPR---IKDQIYELTNLPTLYKVFERC 663


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,673,308
Number of Sequences: 53049
Number of extensions: 663693
Number of successful extensions: 1814
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)