Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A16
         (819 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92813-7|CAB07283.2|  758|Caenorhabditis elegans Hypothetical pr...    81   1e-15
Z81056-10|CAB02904.2|  301|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U40411-3|AAC47066.2|  270|Caenorhabditis elegans Hypothetical pr...    29   5.3  

>Z92813-7|CAB07283.2|  758|Caenorhabditis elegans Hypothetical protein
            T28A8.7 protein.
          Length = 758

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
 Frame = -2

Query: 725  FIARIDCHKSLIQHXTKLYLCDXXXXXXXXXXXXXLYDFQNFGFIKLSNPLP--LEELFV 552
            F+  I+  + LIQ  T LY  D             ++ F N+G  +L    P  +E L +
Sbjct: 529  FVGSINVKQVLIQFGTSLYHLDFSTVLREFFYQISVFSFGNYGSYRLDEEPPAIIEILEL 588

Query: 551  LGLNGSTQNSEQDSELGDTGEMAQHMTQLLLSKRAMLYEYFSLEV----NGEGEXXXXXX 384
            LG   + + +    E+    E      +LL     +L++YF++++    NG         
Sbjct: 589  LGELSTREPNYAAFEVFANVENRFAAEKLLAEHADLLHDYFAIKLDQLENGRLHITEIPS 648

Query: 383  XLDGHAPFVGALPTYLVRLVTEVNWDSEKECFETFCRQTAKFYAQPNP----DPNVESVS 216
             +    P +  LP  +  LV  V++D E+  F T CR     +         D  + + S
Sbjct: 649  LVHYFVPQLEKLPFLIATLVLNVDYDDEQNTFRTICRAIGDLFTLDTNFITLDKKISAFS 708

Query: 215  SEHRRQ--EHVIFPAIRKYFLPPSSFISNGAILQIASLNDLYKVFERC 78
            +   +   + V+ P +++ F+PP  F   G I Q+A  +DLYKVFERC
Sbjct: 709  ATPWKTLIKEVLMPLVKRKFIPPEHFKQAGVIRQLADSHDLYKVFERC 756


>Z81056-10|CAB02904.2|  301|Caenorhabditis elegans Hypothetical
           protein F09F3.4 protein.
          Length = 301

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 644 PSILSYHKDTVSXSAVLMTC-DNLYGL 721
           P +L+YH DT++ S  L TC D++ GL
Sbjct: 146 PCVLTYHPDTLAWSPELSTCTDSMDGL 172


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical
           protein F18C12.1 protein.
          Length = 4171

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 305 SEKECFETFCRQTAKFYAQPNPDPNVES 222
           +EKECF+ +CR+T       N   N+E+
Sbjct: 490 AEKECFDDWCRETVGLIDNKNETINLET 517


>U40411-3|AAC47066.2|  270|Caenorhabditis elegans Hypothetical
           protein B0403.3 protein.
          Length = 270

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 344 TYLVRLVTEVNWDSEKECFETFCRQ 270
           +YL R  TE+N D + E + +FCR+
Sbjct: 209 SYLEREYTELNKDDQDELYSSFCRR 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,871,411
Number of Sequences: 27780
Number of extensions: 346740
Number of successful extensions: 834
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)