Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A15
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.95 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.7  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   2.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   6.7  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 311 IVGLTLIGGVLPICSNQ 361
           ++ LT I G LP+CS+Q
Sbjct: 18  LINLTKIFGFLPVCSSQ 34


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 537  LCPDAELPTSPTRPTAPDTHTSYK 466
            + PD  + T+ +RP   DT   YK
Sbjct: 2299 MVPDKPVTTTTSRPIGTDTSDDYK 2322


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 531 DKVHKDFIPSVSRLLLDLERALSDSGRCHTP 623
           D +  D I S  RLL +    L D GRC TP
Sbjct: 24  DNIDIDDILSNERLLKNYVNCLLDKGRC-TP 53


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 601 SDSALSKSNNSRETEGIKSLCTLSRC 524
           SDS LSK N+ ++   ++ +  +S C
Sbjct: 400 SDSFLSKRNSEKKCGSLREIKEVSDC 425


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 646 RPTESVCRXL*SXPNAIRRSSNGNHHVRXKVYEPVWSG 759
           RP   V R L    + IR S +     R ++Y+ + SG
Sbjct: 285 RPVNQVPRDLNREVDQIRLSLDDMDRWRDRIYDAIHSG 322


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 622 LGRG*RCRRPTESVCRXL*SXPNAIRRSSNGNHH 723
           LG+   CR P +     L   PN  R SSN  H+
Sbjct: 162 LGKTFMCRCPPDWEGTTLSQSPNRRRASSNPCHN 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,172
Number of Sequences: 336
Number of extensions: 4412
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)