Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A15
(812 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 30 2.6
SB_30295| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_59547| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 29 3.4
SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12) 29 4.5
SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 29 5.9
SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9) 29 5.9
SB_45459| Best HMM Match : RVT_1 (HMM E-Value=6e-36) 28 7.8
SB_5302| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_23216| Best HMM Match : ATP-synt_Eps (HMM E-Value=4.9) 28 7.8
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 468 YNSYECREQLGGSGWWAVRHRDKVHKDFIPSVSRLLLDLERALSDSGRC 614
+ S CR +G V HR+K ++ + SRL+ D R +S + +C
Sbjct: 1137 FGSSRCRSLIGFENVVNVLHRNKAPENVLSKYSRLIDDHSRRISLATKC 1185
>SB_30295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 468 YNSYECREQLGGSGWWAVRHRDKVHKDFIPSVSRLLLDLERALSDSGRC 614
+ S CR +G V HR+K ++ + SRL+ D R +S + +C
Sbjct: 3 FGSSRCRSLIGFENVVNVLHRNKAPENVLSKYSRLIDDHSRRISLATKC 51
>SB_59547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 561 PKE*SPCVLCPDAELPTSPTRPTAPDTHTSYKYWQKLVSNQKFY 430
P P L P+ E PT+P RP P T+ K +++ + +
Sbjct: 178 PSTEPPTTLQPNTESPTTPYRPATPVTNLKIKLSSDVIATGEVF 221
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 569 PRNRRNKVL-VYFVPMPNCPPARPAQLLPTLIRVINIGKNLCLIKNFTIIY*VLL 408
P+ R++V +Y + MP ARPA L + I ++ +N C KN ++ ++L
Sbjct: 562 PQGTRDQVAYLYHISMPMGLRARPAAALGSAINRPSLSQNSCPSKNVSVYRKIIL 616
>SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12)
Length = 1338
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -3
Query: 612 SDHCPIALFLNLTTAEKPKE*SPCVLCPDAELPTSPTRPTAPDTHTS 472
+D P+ + LN ++ KE PC+ P A +SPT ++P T TS
Sbjct: 454 TDEAPLFVTLNNRLVQQQKE--PCITPPQATDSSSPTDSSSP-TDTS 497
>SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Frame = -3
Query: 642 TTSSATKVYGSD--HCPIALFLNLTTAEKPK--E*SPCVLCPDAELPTSPTRPTAPDTHT 475
T+S A + S HCP L T+ + SPC CP + T PT A H
Sbjct: 470 TSSRANTAHISQCKHCPHQPVQTLPTSARTNTAHISPCKHCPHQPVQTLPTSARANTAHI 529
Query: 474 S-YKY 463
S YK+
Sbjct: 530 SPYKH 534
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 648 SATTSSATKVYGSDHCPIALFLNLTTAEKPK--E*SPCVLCPDAELPTSPTRPTAPDTHT 475
SA T++A + HCP L T+ + SPC CP + T PT A H
Sbjct: 259 SARTNTA-HISPCKHCPHQPVQTLPTSARTNTAHISPCKHCPHQPVQTLPTSSRANTAHI 317
Query: 474 S 472
S
Sbjct: 318 S 318
>SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9)
Length = 343
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = -3
Query: 606 HCPIALFLNLTTAEKPK--E*SPCVLCPDAELPTSPTRPTAPDTHTS-YKY 463
HCP L T+ + SPC CP + T PT A H S YK+
Sbjct: 46 HCPHQPVQTLPTSARTNTAHISPCKHCPHQPVQTLPTSARANTAHISPYKH 96
>SB_45459| Best HMM Match : RVT_1 (HMM E-Value=6e-36)
Length = 1346
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 240 VVYSLNRKSGLVQVC-LKISKNVKNIKPRQLVICNLIFQFEKKRQMI 103
V Y L RK+ V K+ N + +LVIC+ +F KKR+ +
Sbjct: 713 VDYILTRKNNFRHVTNTKVVPNEECALQHKLVICDTFLKFSKKRKQV 759
>SB_5302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 240 VVYSLNRKSGLVQVC-LKISKNVKNIKPRQLVICNLIFQFEKKRQMI 103
V Y L RK+ V K+ N + +LVIC+ +F KKR+ +
Sbjct: 249 VDYILTRKNNFRHVTNTKVVPNEECALQHKLVICDTFLKFSKKRKQV 295
>SB_23216| Best HMM Match : ATP-synt_Eps (HMM E-Value=4.9)
Length = 252
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 240 VVYSLNRKSGLVQVC-LKISKNVKNIKPRQLVICNLIFQFEKKRQMI 103
V Y L RK+ V K+ N + +LVIC+ +F KKR+ +
Sbjct: 59 VDYILTRKNNFRHVTNTKVVPNEECALQHKLVICDTFLKFSKKRRQV 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,053,460
Number of Sequences: 59808
Number of extensions: 537411
Number of successful extensions: 1362
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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