Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A15
         (812 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   3.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   3.4  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   3.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   3.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   3.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.9  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 531 DKVHKDFIPSVSRLLLDLERALSDSGRC 614
           D ++ D I    RLL +  + L D GRC
Sbjct: 30  DNINVDEILHSDRLLNNYFKCLMDEGRC 57


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 474 SYKYWQKLVSNQKFYYNILSV 412
           +YK +    +++K YYNI+++
Sbjct: 310 NYKNYNNNYNSKKLYYNIINI 330


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 474 SYKYWQKLVSNQKFYYNILSV 412
           +YK +    +++K YYNI+++
Sbjct: 321 NYKNYNNNYNSKKLYYNIINI 341


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 531 DKVHKDFIPSVSRLLLDLERALSDSGRC 614
           D ++ D I    RLL +  + L D GRC
Sbjct: 30  DNINVDEILHSDRLLNNYFKCLMDEGRC 57


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 531 DKVHKDFIPSVSRLLLDLERALSDSGRC 614
           D ++ D I    RLL +  + L D GRC
Sbjct: 30  DNINVDEILHSDRLLNNYFKCLMDEGRC 57


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = -3

Query: 573 TAEKPKE*SP---CVLCPDAELPTSPTRPTAPDTHTS 472
           T+  P++  P   C  C D +LP     P +P + +S
Sbjct: 414 TSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSS 450


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 708 ERESSCPSXSVRTRLVGVEXSEXVHNPXP 794
           +   SCPS  V T+  G + +E    P P
Sbjct: 613 DTNQSCPSPPVTTKRDGTQETEERLPPLP 641


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,203
Number of Sequences: 438
Number of extensions: 5518
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)