Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A15
         (812 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g22130.1 68418.m02576 mannosyltransferase family protein simi...    29   2.8  
At3g24600.1 68416.m03090 hypothetical protein                          29   2.8  
At2g41460.1 68415.m05122 apurinic endonuclease-redox protein / D...    29   3.7  
At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kina...    28   8.5  

>At5g22130.1 68418.m02576 mannosyltransferase family protein similar
           to mannosyltransferase from Rattus norvegicus
           [GI:11414877], Homo sapiens [GI:11414879]; contains Pfam
           profile PF05007: Mannosyltransferase (PIG-M)
          Length = 450

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = +1

Query: 304 ISYCGSNTNWGRLAYLQQSNRLSI--EN**ISWVFFTSNT*YIIVKFLIRHKFLPIFITR 477
           I + G+ T+W    Y+ +   +++       S +F  +NT +++V+ + RH+F P+F   
Sbjct: 379 IMWIGAQTHWLLWGYMLEFKGVNVFLPLWIASLLFLAANT-FVLVRIIQRHRFSPLFRRY 437

Query: 478 MSVGSS 495
            S  SS
Sbjct: 438 ESSSSS 443


>At3g24600.1 68416.m03090 hypothetical protein
          Length = 506

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 521 SASGQSTQGLYSFGFSAVVRFRKSAIGQWSLPYTLVADDVVADRRNQSVG 670
           S+S +++ G    GF      R+S +     PYT+  D+V  D R  SVG
Sbjct: 264 SSSSRTSNGTSGMGFRWKGSSRRSNMYWPEKPYTINEDEVYDDNRGLSVG 313


>At2g41460.1 68415.m05122 apurinic endonuclease-redox protein /
           DNA-(apurinic or apyrimidinic site) lyase identical to
           apurinic endonuclease-redox protein SP: P45951 from
           [Arabidopsis thaliana]
          Length = 536

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 712 RSKNVGWRLXYFIXSDRLIPSVCDNVI 632
           R  N GWRL YF+ S  +  +V D+ I
Sbjct: 492 RKTNKGWRLDYFLVSQSIAANVHDSYI 518


>At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kinase
            family protein low similarity to SP|Q9Z1T6 FYVE
            finger-containing phosphoinositide kinase (EC 2.7.1.68)
            (1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
            (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
            profile PF01504: Phosphatidylinositol-4-phosphate
            5-Kinase
          Length = 1456

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = -2

Query: 694  WRLXYFIXSDRLIPSVCDNVIRDQGVWQRPLSDSALSKSNNSRE 563
            +RL   + SDRL+PS  +  I +QG+  + +S++ +++  N  +
Sbjct: 888  YRLQSLVLSDRLLPSSDETKIYEQGL--KTVSEAGMTRYENDNK 929


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,501,438
Number of Sequences: 28952
Number of extensions: 375123
Number of successful extensions: 905
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1853336000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)