Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A12
(852 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 117 2e-27
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 113 2e-26
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 100 5e-22
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 63 6e-11
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 59 7e-10
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.63
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.6
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 27 2.6
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 4.5
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 4.5
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.5
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 4.5
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.9
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 26 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 117 bits (281), Expect = 2e-27
Identities = 61/142 (42%), Positives = 81/142 (57%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
F GER TKD L EL+GIPPAPRGVPQIEVT D DANGI NV
Sbjct: 441 FEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKIT 500
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + + ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 501 ITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKV 560
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
SDK+T+ +TI+WLDSN
Sbjct: 561 DASDKETVDKAVKETIEWLDSN 582
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
K+E+E KQKELE + NPI+ K+YQ
Sbjct: 587 KDEFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 113 bits (273), Expect = 2e-26
Identities = 60/142 (42%), Positives = 79/142 (55%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
F GER TKD L EL+GIPPAPRGVPQIEVT D DANGI NV
Sbjct: 441 FEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKIT 500
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + + ED+ + IQAKN LESY +S++++++D LK+K+
Sbjct: 501 ITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKV 560
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
SDK+ I +TI+WLD N
Sbjct: 561 DASDKEAIDKAVKETIEWLDHN 582
Score = 42.3 bits (95), Expect = 8e-05
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 587 KDEYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 99.5 bits (237), Expect = 5e-22
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER +TKDN L +L GIPPAPRGVPQIEVT + DANG+ V
Sbjct: 470 YEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKL 529
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDK-QKETIQAKNALESYCFSMKSTM-EDEKLKE 393
+ ++++ E+DK KE I+A+N LE+Y +S+K +DE+L
Sbjct: 530 VIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGG 589
Query: 392 KISDSDKQTILDKCNDTIKWLD 327
K+ DKQ +LD D +WL+
Sbjct: 590 KVDPEDKQAVLDAVEDVAEWLE 611
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMY 239
KEE+E ++++L+ + +PI K+Y
Sbjct: 619 KEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 62.9 bits (146), Expect = 6e-11
Identities = 40/134 (29%), Positives = 63/134 (47%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
F GER + +DN L +LTGI PAP+G PQIEV+ D DA+GI NV
Sbjct: 484 FQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSIT 543
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
+ ++ + ++ + D +KE I+ N ES C ++S ++ K+K+
Sbjct: 544 VAGSSGLTDSEIEAM-VADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH--KDKL 600
Query: 386 SDSDKQTILDKCND 345
+ + K D
Sbjct: 601 DQQAVEDLRSKITD 614
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 496
+K+TNK++ IT+ G L+ EIE MV +AEKYR
Sbjct: 533 DKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYR 566
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 59.3 bits (137), Expect = 7e-10
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Frame = -2
Query: 767 TRGTHPSFXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXX 588
T T P + GER +N +LTGIPP PRG ++E T + DANGI V
Sbjct: 439 TTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
Query: 587 XXXXXXXXXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMED 408
+ + + + +D + ++AK+ LESY ++++T+ +
Sbjct: 499 GRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISE 558
Query: 407 EKLKEKISDSDKQTI---LDKCNDTIKWLDSN 321
+ K+ DK I L +C ++ D+N
Sbjct: 559 PNVMMKLKRGDKSKIEAQLAECMSQLELEDTN 590
Score = 35.5 bits (78), Expect = 0.010
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -1
Query: 603 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 496
+EK+T + I ITN G LS +I+ M+ A+K++
Sbjct: 494 VEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFK 529
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.63
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = -2
Query: 554 KVVSPRKRSSV---WLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 384
K++ R+++S+ + ++ E DDKQ + KN+LE+ M+ + E K
Sbjct: 1256 KLIRGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTG 1314
Query: 383 DSDKQTILDKCNDTIK 336
D ++ LDK D K
Sbjct: 1315 DDNEMEDLDKMEDLEK 1330
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +1
Query: 607 ETLXIPLASMSKVTSI*GTPRGAGGIP 687
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = -2
Query: 545 SPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 366
S + + ++ R T + +++ + A AL + E+ I +K T
Sbjct: 163 SRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYT 222
Query: 365 ILDKCNDTIKWLD 327
+ D+ NDT +WLD
Sbjct: 223 LYDQ-NDTKEWLD 234
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 588 NKENKITITNDKGRLSKEEIERMVNEAE 505
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 555 KGRLSKEEIERMVNEAEK 502
KG LSKEE+ER V +A K
Sbjct: 525 KGTLSKEELERRVYDAAK 542
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 491 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 330
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 473 ETIQAKNALESYCFSMKSTMED 408
ET+ KNALE Y + ++ ++D
Sbjct: 575 ETVDRKNALEEYIYDTRAKLDD 596
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 228 EESPEVCRASRAEHPEPE 175
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 265 KCLPILSACAHTPPXSASWLESSHLMVSLHLSRMV 369
+CL IL A H P + WL H+++ LH MV
Sbjct: 174 RCLLIL-AVLHIP-VALIWLNLEHILIFLHQDPMV 206
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,707,739
Number of Sequences: 5004
Number of extensions: 47602
Number of successful extensions: 211
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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