BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A12
(852 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0546 - 9381989-9383733,9385838-9386054 117 1e-26
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 114 7e-26
05_05_0109 - 22454539-22456268,22457069-22457279 113 1e-25
03_02_0540 + 9340379-9340592,9341250-9342988 112 3e-25
11_08_0075 + 28173220-28173433,28175348-28177083 111 5e-25
03_06_0484 + 34233042-34233258,34235317-34237049 110 2e-24
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 99 2e-21
08_01_0654 - 5639419-5641449 87 2e-17
05_04_0392 - 20889699-20891726 87 2e-17
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 86 3e-17
05_04_0052 - 17515344-17517353 80 3e-15
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 62 4e-10
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 61 1e-09
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 61 1e-09
11_01_0564 - 4447078-4448519,4449465-4449711 57 2e-08
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 56 5e-08
03_02_0542 - 9348126-9349585,9352433-9352655 55 8e-08
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 48 1e-05
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 40 0.002
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 37 0.018
03_02_0180 - 6211823-6213559 36 0.031
08_02_0349 - 16077063-16077824,16077891-16078102,16078142-160782... 33 0.29
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 33 0.38
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 32 0.50
04_03_0904 + 20717005-20718087 32 0.67
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 30 2.0
09_04_0161 - 15232074-15232139,15232299-15232406,15233417-152335... 30 2.7
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.7
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 29 3.6
06_01_0107 - 854756-854883,855126-856968 29 3.6
04_04_0057 + 22410167-22411330 29 3.6
02_02_0503 + 11008475-11008793,11009983-11010140,11011863-110121... 29 3.6
11_06_0610 - 25449085-25453284 29 4.7
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 29 4.7
07_03_1282 - 25447736-25447813,25448670-25448744,25449212-254492... 29 4.7
03_06_0345 - 33281126-33281783,33281872-33282063,33282175-332822... 29 4.7
08_02_0387 + 16585969-16586102,16586427-16586502,16586941-165869... 29 6.2
07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961 29 6.2
03_02_0342 - 7645323-7645909,7646323-7646491 29 6.2
11_06_0464 + 23894893-23895077,23895148-23895706 28 8.2
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 28 8.2
06_01_1096 - 8988463-8989167,8989335-8989361,8989560-8989648,898... 28 8.2
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 28 8.2
03_05_0153 + 21299150-21299593,21299733-21299873,21299971-213000... 28 8.2
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 28 8.2
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 117 bits (282), Expect = 1e-26
Identities = 59/142 (41%), Positives = 79/142 (55%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER TKDN L ELTGIPPAPRGVPQI VT D DANGI NV
Sbjct: 450 YEGERTRTKDNNLLGKFELTGIPPAPRGVPQINVTFDIDANGILNVSAEDKTTGKKNKIT 509
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + + ED++ + ++A+NALE+Y ++M++T+ DEK+ K+
Sbjct: 510 ITNDKGRLSKEEIERMVQEAEKYKAEDEQVRHKVEARNALENYAYNMRNTVRDEKIASKL 569
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
DK+ I D D IKWLD N
Sbjct: 570 PADDKKKIEDAIEDAIKWLDGN 591
Score = 37.1 bits (82), Expect = 0.018
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -3
Query: 304 EEYEHKQKELEGIYNPIITKMYQ 236
+E+E K KELE + NPII+KMYQ
Sbjct: 597 DEFEDKMKELESLCNPIISKMYQ 619
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 114 bits (275), Expect = 7e-26
Identities = 58/142 (40%), Positives = 80/142 (56%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER TKDN L EL+GIPPAPRGVPQI V D DANGI NV
Sbjct: 641 YEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKIT 700
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + + ED++ K+ + AKNALE+Y ++M++T++D+K+ K+
Sbjct: 701 ITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDDKIASKL 760
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
S DK+ I D + I WLDSN
Sbjct: 761 SADDKKKIEDAIDGAINWLDSN 782
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 304 EEYEHKQKELEGIYNPIITKMYQ 236
+E+E K KELE I NPII KMYQ
Sbjct: 788 DEFEDKMKELESICNPIIAKMYQ 810
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 113 bits (273), Expect = 1e-25
Identities = 57/142 (40%), Positives = 80/142 (56%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER TKDN L EL+GIPPAPRGVPQI V D DANGI NV
Sbjct: 448 YEGERARTKDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKIT 507
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + + ED++ K+ + AKNALE+Y ++M++T++DEK+ K+
Sbjct: 508 ITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIASKL 567
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
+ DK+ I D + I WLD+N
Sbjct: 568 AADDKKRIEDAIDGAISWLDTN 589
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -3
Query: 331 WIPTSWPXK-EEYEHKQKELEGIYNPIITKMYQ 236
W+ T+ + +E+E K KELEGI NPII KMYQ
Sbjct: 585 WLDTNQLAEADEFEDKMKELEGICNPIIAKMYQ 617
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 112 bits (270), Expect = 3e-25
Identities = 56/142 (39%), Positives = 81/142 (57%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER TKDN L EL+GIPPAPRGVPQI V D DANGI NV
Sbjct: 449 YEGERTRTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKIT 508
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + + ED++ K+ + AKN+LE+Y ++M++T++D+K+ K+
Sbjct: 509 ITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKKKVDAKNSLENYAYNMRNTIKDDKIASKL 568
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
++DK+ I D + I WLDSN
Sbjct: 569 PEADKKKIEDAIDGAISWLDSN 590
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 304 EEYEHKQKELEGIYNPIITKMYQ 236
EE+E K KELEG+ NPII KMYQ
Sbjct: 596 EEFEDKMKELEGVCNPIIAKMYQ 618
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 111 bits (268), Expect = 5e-25
Identities = 55/142 (38%), Positives = 81/142 (57%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER T+DN L EL+GIPPAPRGVPQI V D DANGI NV
Sbjct: 449 YEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKIT 508
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + + ED++ K+ +++KNALE+Y ++M++T++DEK+ K+
Sbjct: 509 ITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTIKDEKIASKL 568
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
+DK+ I D + I+WLD N
Sbjct: 569 PAADKKKIEDAIDQAIQWLDGN 590
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3
Query: 304 EEYEHKQKELEGIYNPIITKMYQ 236
+E++ K KELEGI NPII KMYQ
Sbjct: 596 DEFDDKMKELEGICNPIIAKMYQ 618
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 110 bits (264), Expect = 2e-24
Identities = 55/142 (38%), Positives = 79/142 (55%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER T+DN L EL+GIPPAPRGVPQI V D DANGI NV
Sbjct: 450 YEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKIT 509
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + + ED++ K+ + AKN+LE+Y ++M++T++DEK+ K+
Sbjct: 510 ITNDKGRLSKEEIEKMVQDAEKYKSEDEEHKKKVDAKNSLENYAYNMRNTIQDEKIASKL 569
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
DK+ I D I+WLD+N
Sbjct: 570 PADDKKKIEDAVEQAIQWLDNN 591
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3
Query: 304 EEYEHKQKELEGIYNPIITKMYQ 236
EE+E K KELEG+ NPII KMYQ
Sbjct: 597 EEFEDKMKELEGLCNPIIAKMYQ 619
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 99 bits (238), Expect = 2e-21
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
F GER MTKD L +L+GIP APRG PQIEVT + DANGI NV
Sbjct: 472 FEGERSMTKDCRLLGKFDLSGIPAAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKIT 531
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMED-EKLKEK 390
K ++ + ED K KE I A+N LE+Y ++MK+T+ D +KL +K
Sbjct: 532 ITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADK 591
Query: 389 ISDSDKQTILDKCNDTIKWLDSN 321
+ +K+ + + + ++WLD N
Sbjct: 592 LESEEKEKVEEALKEALEWLDEN 614
Score = 36.7 bits (81), Expect = 0.023
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
KEEYE K KE+E + NPII+ +YQ
Sbjct: 619 KEEYEEKLKEVEAVCNPIISAVYQ 642
>08_01_0654 - 5639419-5641449
Length = 676
Score = 87.0 bits (206), Expect = 2e-17
Identities = 48/151 (31%), Positives = 74/151 (49%)
Frame = -2
Query: 773 KPTRGTHPSFXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXX 594
K T T F GER MT+DN L +L GI PAPRG PQIEVT + DANGI +V
Sbjct: 475 KQTTVTIQVFEGERSMTRDNRLLGRFDLAGIAPAPRGAPQIEVTFEVDANGILSVLAADK 534
Query: 593 XXXXXXXXXXXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTM 414
++ + ED + +E + A+N+LE+Y +++K+T+
Sbjct: 535 ATGRSEKITISGDDRKISQEEIDRMVREAEEFAEEDRRHREQVDARNSLEAYVYNIKNTL 594
Query: 413 EDEKLKEKISDSDKQTILDKCNDTIKWLDSN 321
K+ + + +K + + + +WLD N
Sbjct: 595 -GGKMADAMEGEEKDKVEEAVREAYEWLDGN 624
Score = 34.7 bits (76), Expect = 0.095
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
KEEYE K +ELE + NP+++ +YQ
Sbjct: 629 KEEYEEKLRELEDVCNPVMSAVYQ 652
>05_04_0392 - 20889699-20891726
Length = 675
Score = 86.6 bits (205), Expect = 2e-17
Identities = 48/151 (31%), Positives = 75/151 (49%)
Frame = -2
Query: 773 KPTRGTHPSFXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXX 594
+ T T F GER MT+DN L +LTGI PAPRG PQI VT + DANGI +V
Sbjct: 475 RQTTVTIQVFEGERSMTRDNRLLGKFDLTGIAPAPRGAPQIAVTFEVDANGILSVLAADK 534
Query: 593 XXXXXXXXXXXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTM 414
++ + ED + +E + A+N+LE+Y +++KST+
Sbjct: 535 ATGRSEKITISGDDRKISQEEIDRMVREAEEFADEDRRHREQVDARNSLEAYVYNVKSTL 594
Query: 413 EDEKLKEKISDSDKQTILDKCNDTIKWLDSN 321
K+ + + +K+ + + + +WLD N
Sbjct: 595 -GGKMADAMEGEEKEKVEEAVREAHEWLDGN 624
Score = 34.7 bits (76), Expect = 0.095
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
KEEYE K +ELE + NP+++ +YQ
Sbjct: 629 KEEYEEKLRELEDVCNPVMSAVYQ 652
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 86.2 bits (204), Expect = 3e-17
Identities = 46/142 (32%), Positives = 70/142 (49%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
F GER +TKD +L+GI PAPRGVPQIEVT + D NGI +V
Sbjct: 478 FEGERSLTKDCRELGRFDLSGIAPAPRGVPQIEVTFEVDENGILHVTASDKAAGRSKSIT 537
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K ++ + ED + +E + A+N LE+Y + M+S + D + KI
Sbjct: 538 ITNDKGRLSQEEIDRMVREAEEFAEEDRRVRERVDARNRLENYVYRMRSAVRDGGMAGKI 597
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
D D++ + + ++WL+ N
Sbjct: 598 GDDDRERMESALTEALEWLEDN 619
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
KE+YE K KE+E + PII ++Y+
Sbjct: 628 KEDYEEKLKEVEQVCGPIIKQVYK 651
>05_04_0052 - 17515344-17517353
Length = 669
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/151 (30%), Positives = 70/151 (46%)
Frame = -2
Query: 773 KPTRGTHPSFXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXX 594
K T T F GER MT+DN L +L GI PAPRG PQIEV + DA+GI +V
Sbjct: 471 KQTTVTVKVFEGERSMTRDNRLLGRFDLAGIAPAPRGAPQIEVAFEVDADGILSVSAADR 530
Query: 593 XXXXXXXXXXXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTM 414
+ R+ L ED + +E A+N+LE+Y + +K+ +
Sbjct: 531 ATGRSERITISGDDRKTSREEIDRMLGEAEEFADEDRRHRERAGARNSLEAYVYGVKNAV 590
Query: 413 EDEKLKEKISDSDKQTILDKCNDTIKWLDSN 321
++ + +K+ + + +WLD N
Sbjct: 591 VGGEMAGAMDGGEKEKVEAAVMEAYEWLDGN 621
Score = 34.7 bits (76), Expect = 0.095
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
KEEYE K +ELE + NP+++ +YQ
Sbjct: 626 KEEYEEKLRELEDVCNPVMSAVYQ 649
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 62.5 bits (145), Expect = 4e-10
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = -2
Query: 740 GERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXXXX 561
GER M DN L +L GIPPAPRG+PQIEVT D DANGI V
Sbjct: 468 GEREMAADNKLLGEFDLVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIR 527
Query: 560 XTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMED--EKLKEKI 387
+ +S + + + +D ++K I +N ++ +S++ ++ + +K+ ++
Sbjct: 528 SSGGLSEAEIQKM-VHEAELHSQKDQERKALIDIRNTADTTIYSIEKSLGEYRDKIPAEV 586
Query: 386 SDSDKQTILDKCND 345
+ + I D N+
Sbjct: 587 ASEIETAIADLRNE 600
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 61.3 bits (142), Expect = 1e-09
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -2
Query: 740 GERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV 609
GER M DN L +L GIPPAPRG+PQIEVT D DANGI V
Sbjct: 488 GEREMATDNKLLGEFDLVGIPPAPRGMPQIEVTFDIDANGIVTV 531
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRXRG*QAK 475
+KST KE +ITI G LS+ EI++MV EAE + + + K
Sbjct: 535 DKSTGKEQQITI-RSSGGLSEAEIQKMVQEAELHSQKDQERK 575
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/111 (31%), Positives = 49/111 (44%)
Frame = -2
Query: 740 GERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXXXX 561
GER +DN L GIPPAPRGVPQIEV D DANGI +V
Sbjct: 420 GEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITIT 479
Query: 560 XTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMED 408
+ P+ + ED ++++ I KN ES + + +++
Sbjct: 480 GASTL-PKDEVEKMVEEAEKFAKEDKEKRDAIDTKNQAESVIYQTEKQLKE 529
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2
Query: 752 PSFXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV 609
P + GE TKDN L L GIPPAP+ VP I+VT D DANG+ NV
Sbjct: 467 PVYEGESANTKDNNLLGEFTLYGIPPAPKRVPSIDVTFDIDANGVLNV 514
Score = 45.6 bits (103), Expect = 5e-05
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = -1
Query: 597 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRXR 490
K T ++N ITITN GRL+KEEI+RM EAE+++ +
Sbjct: 519 KVTGQKNSITITNRSGRLNKEEIDRMALEAERHKMK 554
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 55.6 bits (128), Expect = 5e-08
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = -2
Query: 764 RGTHPSFXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV 609
R + P F GE T DN L L+G+ PAPRGVPQI+VT D D NG+ +V
Sbjct: 416 RVSFPVFEGESASTLDNNLLGKFVLSGVLPAPRGVPQIDVTFDFDTNGVLHV 467
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -1
Query: 609 FXIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRXR 490
F + T +N TITN GRL KE++ERM EA Y +
Sbjct: 468 FAEDMGTGSKNNNTITNHSGRLKKEDVERMSREARSYNRK 507
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 54.8 bits (126), Expect = 8e-08
Identities = 28/44 (63%), Positives = 28/44 (63%)
Frame = -2
Query: 740 GERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV 609
GE TKDN LTGIPPAPRGVPQI VT D NGI NV
Sbjct: 463 GEGRRTKDNNPLGKFVLTGIPPAPRGVPQINVTFSIDYNGIMNV 506
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYR 496
+K+T + N ITI +DKGRLSKEEIERMV +AEKY+
Sbjct: 510 DKTTGRSNSITIKSDKGRLSKEEIERMVKKAEKYK 544
>11_01_0563 +
4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV 609
F GE N L L+GI PAPRGVPQI+VT + DANG+ +V
Sbjct: 477 FEGESASILRNNLLGKFVLSGILPAPRGVPQIDVTFEFDANGVLHV 522
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRXR 490
+K T ++N I I+N GRL+KEEIERM EAE+Y+ +
Sbjct: 1314 DKDTGRKNNIIISNRSGRLNKEEIERMALEAERYKMK 1350
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV 609
F GE TK+N L L+GI PAP GV +I+ T + DANG+ +V
Sbjct: 1111 FEGESASTKNNYLLGEFVLSGITPAPAGVARIDETLEIDANGVLHV 1156
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRXR 490
+ T ++N ITITN GRL KE++ERM EA Y +
Sbjct: 1160 DMGTGRKNSITITNHSGRLKKEDVERMSREARSYNRK 1196
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2
Query: 692 LTGIPPAPRGVPQIEVTXDXDANGIXNV 609
L GIPPAP GVP +VT D D NG+ NV
Sbjct: 1283 LFGIPPAPMGVPHFDVTFDIDGNGVLNV 1310
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 499
+ T +N I ITN GRL KE++ERM EA Y
Sbjct: 526 DMGTGSKNNIAITNHSGRLKKEDVERMAREARSY 559
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = -2
Query: 512 RQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDE-KLKEKISDSDKQTILDKCNDTIK 336
R + + +D +++ T + KN LESY +SMK +E+ ++ ++ ++++ +K N+
Sbjct: 652 RLEALDKKDAERRRTAELKNNLESYIYSMKEKLEENTEILTVSTEQERESFAEKLNEVQD 711
Query: 335 WL 330
WL
Sbjct: 712 WL 713
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 37.1 bits (82), Expect = 0.018
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -2
Query: 491 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 330
+D +ET KNA+ESY + M++ + D K + ++ DK+ + K + WL
Sbjct: 607 QDRVMEETKDKKNAVESYVYDMRNKLYD-KYNDFVTAEDKEAFIAKLQEVEDWL 659
>03_02_0180 - 6211823-6213559
Length = 578
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV 609
+ GE +DN L ++TGIP A +G +I V D DA + V
Sbjct: 480 YEGEGNQAEDNHLLGYFKITGIPAAAKGTVEINVCMDIDAGNVLRV 525
>08_02_0349 -
16077063-16077824,16077891-16078102,16078142-16078204,
16078439-16078865,16078870-16078919,16079006-16079360
Length = 622
Score = 33.1 bits (72), Expect = 0.29
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = -1
Query: 363 PRQVQRHHQVAGFQPAGRXRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHP 184
P+ Q +Q + GR R +S +N KA +R R +E+P A + P
Sbjct: 262 PQGGQGWNQPHPYYQGGRILRQPDSSVENVKAIMMR--GGINRTAKEAPSSDSADKEVQP 319
Query: 183 EPEVPPPGLEA-LAPPSRRSIKPT 115
E VPP + L P +RS KP+
Sbjct: 320 EKTVPPEYYDTRLLPFPQRSRKPS 343
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -2
Query: 491 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 330
+D + T + KNALESY + ++ + E+ + +DS+++ I T WL
Sbjct: 563 QDKLMERTKERKNALESYVYDTRNKL-SERYRSFATDSEREEISLSLQQTEDWL 615
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = -2
Query: 491 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 330
+D +ET + KNA+E+Y + M++ + D K + + K+ + K + WL
Sbjct: 606 QDRVMEETKEKKNAVEAYVYDMRNKLYD-KYNDFVMSEYKEGFIAKLQEVEDWL 658
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 231 PEESPEVCRASRAEHPEPEVPPPGLE--ALAPPSRRSIKPTFHTTLKPT 91
PE+ P+ + P+PE PP + A PP PT+ T KPT
Sbjct: 44 PEKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPT 92
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 499
+K +N++ + ++ +LSKEEIERM EA++Y
Sbjct: 487 DKVNGHKNQMRVM-EQSQLSKEEIERMTMEAKEY 519
>09_04_0161 -
15232074-15232139,15232299-15232406,15233417-15233506,
15233617-15233733,15234408-15234527,15234930-15236168
Length = 579
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 240 TRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTS 67
T E +PE RA A+ P P + + P+ RS+ P +T + ++ +TS
Sbjct: 67 TSANECTPEPKRAQSADRRRPSTPSSRVSTPSTPASRSVTPVRNTVTEGHKSSRRITS 124
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = -1
Query: 240 TRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 94
T P P R R H P PPP L PP SI PT L P
Sbjct: 69 TPTPPPPPPAPRPPRRHHRIPPPPPPLLPT-PPPPPASISPTPAPPLPP 116
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +1
Query: 70 GYKVVVTGRFKCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRH 234
GY VVTG G C+ N Q L G+ LR R+L PG+P+ + G L H
Sbjct: 563 GYGCVVTGMPNLGNTCYLNALL----QCLLVLGK-LRARILGPGAPSGVLGDLLH 612
>06_01_0107 - 854756-854883,855126-856968
Length = 656
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -1
Query: 252 LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 94
L T +S + ++ A EP+ PPP A AP RR+ + T +P
Sbjct: 51 LEELTESLAKSVQALESALARSVEPDPPPPAAAAAAPGDRRAPQGVAVTKRRP 103
>04_04_0057 + 22410167-22411330
Length = 387
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 213 VCRASRAEHPEPEVPPPGLEALAPPSRRS 127
+CRA+ + P P PPP A +P RS
Sbjct: 173 LCRANLEKPPPPPPPPPAAAAASPSPERS 201
>02_02_0503 +
11008475-11008793,11009983-11010140,11011863-11012102,
11013502-11013757,11013846-11014057,11014413-11014453,
11014531-11014567
Length = 420
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -1
Query: 219 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTF----HTTLKPTCNNHLVT 70
P C A+ A P P PP A A P R + P +T NN+L T
Sbjct: 21 PRCCSAAPASSPPPSPPPSPAAAAAAPRRTPLVPALFVIGDSTADVGTNNYLGT 74
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 231 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 94
P E+PE ++ PE PP +A +PP+ +S+ P +L P
Sbjct: 1087 PPETPE--KSYPPSTPEESSPPSVPKASSPPTEKSLPPPATVSLPP 1130
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 231 PEES--PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKP 94
PEES P V +AS + E +PPP +L PP+ + + P + P
Sbjct: 1100 PEESSPPSVPKAS-SPPTEKSLPPPATVSLPPPTVKPLPPPVPVSSPP 1146
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 219 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKP 118
P V + S + +PPP EA APP++ S P
Sbjct: 1330 PPVPQVSLPPPKQESLPPPAKEAEAPPAKESKPP 1363
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = -2
Query: 536 KRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 357
++ + Q+S E D + + ++ + LE ++ M+D + K + +DS + D
Sbjct: 444 EKDATLFQHQQSVERVSDLESQLLKLQPELEEIEQKVQMLMQDLEQKRQEADSAHAQLQD 503
Query: 356 KCN 348
+CN
Sbjct: 504 ECN 506
>07_03_1282 -
25447736-25447813,25448670-25448744,25449212-25449281,
25449515-25449747,25451210-25451719
Length = 321
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 213 VCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTL 100
+CR + P P PPP +APP P F T +
Sbjct: 128 LCRCPAVDEPPPAAPPP---VVAPPEADPESPNFPTNV 162
>03_06_0345 -
33281126-33281783,33281872-33282063,33282175-33282217,
33282751-33282874,33282966-33283058,33284484-33284685,
33284751-33284857,33285462-33285543,33285629-33285666,
33285751-33285837,33286324-33286434,33286554-33286904
Length = 695
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -1
Query: 219 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVTSP 64
P C SR + P P PPP E PP+ + TT K LV P
Sbjct: 42 PRACN-SRPKVPPPPPPPPRQERARPPAGAAAGEEEETTPKCRVVTPLVAEP 92
>08_02_0387 +
16585969-16586102,16586427-16586502,16586941-16586996,
16587257-16587774,16587855-16588015,16588129-16588317,
16588428-16588566,16588659-16588948
Length = 520
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 542 PRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQ 369
P +VW +R + DK+ E KN + F +TM KLK + SD+Q
Sbjct: 269 PLLTDNVWRLRNIGKDGPIDKRLEAEGIKNVQD---FLKLNTMNPNKLKSLVGMSDRQ 323
>07_03_1022 - 23353054-23353263,23353399-23353505,23354613-23354961
Length = 221
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1
Query: 186 PEPEVPPPGLEALAPPSRRSIKPTFHTTLKPTCNNHLVT 70
P P PPP PS R P+ H L T LVT
Sbjct: 6 PPPSAPPPSPPRAVFPSARCCLPSPHRFLPSTRRKRLVT 44
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -1
Query: 231 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFH 109
PE P + PEP PP + APP +P FH
Sbjct: 184 PEYKPPTPTLTPIPTPEPSYGPPAPKPPAPPVEDEPQPFFH 224
>11_06_0464 + 23894893-23895077,23895148-23895706
Length = 247
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 225 ESPEVCRASRAEHP-EPEVPPPGLEALAPPSRRS 127
+S + CR +H PPP A APPSRRS
Sbjct: 45 DSIDSCRFHVGDHAWRIRTPPPPPAATAPPSRRS 78
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -1
Query: 213 VCRASRAEHP--EPEVPPPGLEALAPPSRRSIKPTFHTTLKP 94
V +A+ A+ P P V PP L PP+ + P TT P
Sbjct: 15 VVQAAMAQRPGMPPAVVPPSLPTTTPPAPTVVAPPLPTTPPP 56
>06_01_1096 -
8988463-8989167,8989335-8989361,8989560-8989648,
8989830-8990039,8990877-8991047,8991595-8991777,
8991886-8991969,8992067-8992178
Length = 526
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 183 EPEVPPPGLEALAPPSRRSIKPTFHTTLKPT 91
EP+ PP A PP ++ +KP+ L PT
Sbjct: 293 EPQTPPRPSIASIPPYQKPLKPSLRPPLIPT 323
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 28.3 bits (60), Expect = 8.2
Identities = 25/99 (25%), Positives = 38/99 (38%)
Frame = -2
Query: 683 IPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXXXXXTKVVSPRKRSSVWLMRQR 504
IPPA GV + DAN NV K S +SV +
Sbjct: 304 IPPAAFGVGNVTEAFPVDANTPFNVTERSKKPPVPNWLREELLKKKSTSVSASVQHSTEF 363
Query: 503 STEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
++ +D +K + A S KST +DE+ +++I
Sbjct: 364 HSKGSEDAEKTLKSSDQADSRSVDSAKSTDDDEEDEDEI 402
>03_05_0153 +
21299150-21299593,21299733-21299873,21299971-21300084,
21300181-21300354,21300486-21300494
Length = 293
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 231 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRR 130
P SP R R HP P P L L SRR
Sbjct: 9 PSPSPASTRLLRGHHPPPSCSAPSLLRLTRSSRR 42
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -1
Query: 561 NDKGRLSKEEIERMVNE 511
++ GRLSKEEI+RM+ E
Sbjct: 544 HEHGRLSKEEIDRMIRE 560
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,111,089
Number of Sequences: 37544
Number of extensions: 377859
Number of successful extensions: 1836
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1778
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -