Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A12
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 136 2e-32
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 136 2e-32
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 103 1e-22
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 101 5e-22
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 101 9e-22
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 95 7e-20
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 89 4e-18
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 87 1e-17
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 70 2e-12
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 32 0.45
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 32 0.45
Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical p... 31 0.79
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 30 2.4
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 30 2.4
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.4
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 2.4
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 30 2.4
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 2.4
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical pr... 29 5.5
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 29 5.5
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 5.5
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 5.5
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 7.3
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 28 7.3
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 28 7.3
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 28 7.3
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 28 7.3
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 7.3
Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 136 bits (328), Expect = 2e-32
Identities = 70/142 (49%), Positives = 86/142 (60%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER MTKDN L EL+GIPPAPRGVPQIEVT D DANGI NV
Sbjct: 444 YEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKIT 503
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K + + + +D+ QK+ I AKN LESY F++K T+EDEKLK+KI
Sbjct: 504 ITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKI 563
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
S DK+ I DKC++ +KWLDSN
Sbjct: 564 SPEDKKKIEDKCDEILKWLDSN 585
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
KEE+EH+QK+LEG+ NPII+K+YQ
Sbjct: 590 KEEFEHQQKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 136 bits (328), Expect = 2e-32
Identities = 70/142 (49%), Positives = 86/142 (60%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER MTKDN L EL+GIPPAPRGVPQIEVT D DANGI NV
Sbjct: 444 YEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQIT 503
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K + + + +D+ QK+ I AKN LESY F++K T+EDEKLK+KI
Sbjct: 504 ITNDKDRFSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKI 563
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
S DK+ I DKC++ +KWLDSN
Sbjct: 564 SPEDKKKIEDKCDEILKWLDSN 585
Score = 34.7 bits (76), Expect = 0.084
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
KEE+E +QK+LEG+ P ++K+YQ
Sbjct: 590 KEEFESQQKDLEGLAKPDLSKLYQ 613
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 103 bits (248), Expect = 1e-22
Identities = 55/142 (38%), Positives = 76/142 (53%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER MT+DN EL+GIPPAPRGVPQIEVT D DANGI NV
Sbjct: 444 YEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRIT 503
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K + + + E ED +Q+E +QA+N LE+Y F +K +++ K+
Sbjct: 504 IQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQALDE--YSSKL 561
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
S D + ++T++WLDSN
Sbjct: 562 STEDASRAKEAVDETLRWLDSN 583
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 331 WIPT-SWPXKEEYEHKQKELEGIYNPIITKMYQ 236
W+ + S K+E E K KEL+ + I+TKM+Q
Sbjct: 579 WLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 103 bits (248), Expect = 1e-22
Identities = 55/142 (38%), Positives = 76/142 (53%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER MT+DN EL+GIPPAPRGVPQIEVT D DANGI NV
Sbjct: 444 YEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRIT 503
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K + + + E ED +Q+E +QA+N LE+Y F +K +++ K+
Sbjct: 504 IQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLEAYAFQIKQALDE--YSSKL 561
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
S D + ++T++WLDSN
Sbjct: 562 STEDASRAKEAVDETLRWLDSN 583
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 331 WIPT-SWPXKEEYEHKQKELEGIYNPIITKMYQ 236
W+ + S K+E E K KEL+ + I+TKM+Q
Sbjct: 579 WLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 101 bits (243), Expect = 5e-22
Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
F GER MTKDN +LTG+PPAPRGVPQIEVT + D NGI +V
Sbjct: 471 FEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKIT 530
Query: 566 XXXTK-VVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMED-EKLKE 393
+ +SP ++ ++ E +D K K+ +A+N LESY +++K+ +ED EKL
Sbjct: 531 ITNDQNRLSPEDIEAMINDAEKFAE-DDKKVKDKAEARNELESYAYNLKNQIEDKEKLGG 589
Query: 392 KISDSDKQTILDKCNDTIKWLDSN 321
K+ + DK+TI + + I WL SN
Sbjct: 590 KLDEDDKKTIEEAVEEAISWLGSN 613
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 101 bits (241), Expect = 9e-22
Identities = 58/144 (40%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
F GER MTKDN +LTG+PPAPRGVPQIEVT + D NGI +V
Sbjct: 471 FEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKIT 530
Query: 566 XXXTK-VVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMED-EKLKE 393
+ +SP + ++ E +D K K+ +A+N LESY +++K+ +ED EKL
Sbjct: 531 ITNDQNRLSPEDIERMINDAEKFAE-DDKKVKDKAEARNELESYAYNLKNQIEDKEKLGG 589
Query: 392 KISDSDKQTILDKCNDTIKWLDSN 321
K+ + DK+TI + + I WL SN
Sbjct: 590 KLDEDDKKTIEEAVEEAISWLGSN 613
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 94.7 bits (225), Expect = 7e-20
Identities = 51/142 (35%), Positives = 72/142 (50%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
+ GER MT+DN ELTGIPPAPRGVPQ++VT D DANGI NV
Sbjct: 444 YEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRIT 503
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
K + + + E ED Q++ I ++N LE+Y F +K +E+ +
Sbjct: 504 IRNEKGRLSQADIDRMVNEAKQFEREDAAQRDRISSRNQLEAYAFQVKQALEEH--GSLL 561
Query: 386 SDSDKQTILDKCNDTIKWLDSN 321
S D + D DT++W++ N
Sbjct: 562 SAEDAKRAKDAVEDTLRWMERN 583
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 307 KEEYEHKQKELEGIYNPIITKMYQ 236
K+E E K KEL+ I I+TKM+Q
Sbjct: 588 KDEIEAKDKELKSICQDILTKMHQ 611
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 89.0 bits (211), Expect = 4e-18
Identities = 53/144 (36%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV-XXXXXXXXXXXXX 570
+ GER M DN ++TGIPPAPRGVPQIEVT + D NGI +V
Sbjct: 468 YEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLT 527
Query: 569 XXXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMED-EKLKE 393
+SP + + +D QKE ++++N LE+Y + MK+ + D EKL
Sbjct: 528 ITNDHNRLSPEDIERM-INDADKFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGG 586
Query: 392 KISDSDKQTILDKCNDTIKWLDSN 321
K++D DK +I I+WL SN
Sbjct: 587 KLTDEDKVSIESAVERAIEWLGSN 610
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 499
+K T +NK+TITND RLS E+IERM+N+A+K+
Sbjct: 517 DKGTGNKNKLTITNDHNRLSPEDIERMINDADKF 550
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -3
Query: 304 EEYEHKQKELEGIYNPIITKMY 239
EE + ++KELE + PI++K+Y
Sbjct: 616 EENKEQKKELESVVQPIVSKLY 637
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNV-XXXXXXXXXXXXX 570
+ GER M DN ++TGIPPAPRGVPQIEVT + D NGI +V
Sbjct: 99 YEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLT 158
Query: 569 XXXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMED-EKLKE 393
+SP + + +D QKE ++++N LE+Y + +K+ + D EKL
Sbjct: 159 ITNDHNRLSPEDIERM-INDADKFAADDQAQKEKVESRNELEAYAYQIKTQIADKEKLGG 217
Query: 392 KISDSDKQTILDKCNDTIKWLDSN 321
K++D DK +I I+WL SN
Sbjct: 218 KLTDEDKVSIESAVERAIEWLGSN 241
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = -1
Query: 600 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 499
+K T +NK+TITND RLS E+IERM+N+A+K+
Sbjct: 148 DKGTGNKNKLTITNDHNRLSPEDIERMINDADKF 181
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -3
Query: 304 EEYEHKQKELEGIYNPIITKMY 239
EE + ++KELE + PI++K+Y
Sbjct: 247 EENKEQKKELESVVQPIVSKLY 268
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 69.7 bits (163), Expect = 2e-12
Identities = 45/141 (31%), Positives = 65/141 (46%)
Frame = -2
Query: 746 FXGERXMTKDNXLXQ*XELTGIPPAPRGVPQIEVTXDXDANGIXNVXXXXXXXXXXXXXX 567
F GER M N L L GIPPAPRGVPQ+EVT D DANGI NV
Sbjct: 466 FQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIV 525
Query: 566 XXXTKVVSPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKI 387
+ +S + ++ + ED K+KE ++ N E ++ M + +++
Sbjct: 526 IQSSGGLSKDQIENM-IKEAEKNAAEDAKRKELVEVINQAEGIIHDTEAKMTE--FADQL 582
Query: 386 SDSDKQTILDKCNDTIKWLDS 324
+ + + K DT K LD+
Sbjct: 583 PKDECEALRTKIADTKKILDN 603
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 192 EHPEPEVPPPGLEALAPPSRRSIKPTF 112
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 192 EHPEPEVPPPGLEALAPPSRRSIKPTF 112
E P E PPG +PPSR+ IK F
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIKTAF 128
>Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical
protein Y57G11C.52 protein.
Length = 96
Score = 31.5 bits (68), Expect = 0.79
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 630 CQRYXQRFXIEKSTNKEN---KITITNDKGRLSKEEIERMVNEAEKYR 496
C+R Q +EK +N T N G LSKEE++ M++E+ K R
Sbjct: 47 CRRLSQPIEVEKELCIDNCKAGETCVNGLGCLSKEEVQMMIDESNKPR 94
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
R107.8 protein.
Length = 1429
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Frame = -1
Query: 357 QVQRHHQVAGFQPAGRXRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEP 178
Q HH + R R S + R+ TR P++ + A +
Sbjct: 1282 QANNHHNIVDIFDRCRPEREYSMDLHIQHTHQPQPSRKVTRAPKKQTSRSKKESASNSRD 1341
Query: 177 EV---PPPGLEALAPPSRRSIKPTFHTTLKPTCNNHL 76
PPP + + PS + T HTT PT N+L
Sbjct: 1342 STHLTPPPSDGSTSTPSPQHFMNTTHTT--PTSLNYL 1376
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 204 ASRAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 103
A+R P+P+ PPP L PP RR S + T TT
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 204 ASRAEHPEPEVPPPGLEALAPPSRR-SIKPTFHTT 103
A+R P+P+ PPP L PP RR S + T TT
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRRKSGQKTDQTT 712
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 222 SPEVCRASRAEH-PEPEVPPPGLEALAPP 139
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Frame = -1
Query: 357 QVQRHHQVAGFQPAGRXRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEP 178
Q HH + R R S + R+ TR P++ + A +
Sbjct: 1282 QANNHHNIVDIFDRCRPEREYSMDLHIQHTHQPQPSRKVTRAPKKQTSRSKKESASNSRD 1341
Query: 177 EV---PPPGLEALAPPSRRSIKPTFHTTLKPTCNNHL 76
PPP + + PS + T HTT PT N+L
Sbjct: 1342 STHLTPPPSDGSTSTPSPQHFMNTTHTT--PTSLNYL 1376
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 222 SPEVCRASRAEH-PEPEVPPPGLEALAPP 139
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -1
Query: 240 TRVPEESPEVCRASRAEHPEPE---VPPPGLEALAPPSRRSI 124
+R P SP ++ HP P + PPGLE L+ R+ I
Sbjct: 1408 SRQPSRSPSFVNPQQSFHPIPSFEPIVPPGLEDLSEEERQKI 1449
>U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical
protein F54H5.5 protein.
Length = 662
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 461 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIK 336
++NA++ Y SM + +DE LK K+ D + C T+K
Sbjct: 263 SRNAIQEYVSSMSTHFKDEILKAKLPPMDASRFI--CGVTLK 302
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 518 LMRQRSTEXEDDKQKETIQAKNALES--YCFSMKSTMEDEKLKEKISDSDKQTILDKCND 345
L+ R E Q E K + ES CF +K T +EKLK ++ DK+ + K
Sbjct: 331 LLEDRVLLLETRYQLEVDDLKKSFESDKECFLLKMTSLEEKLKS--AEEDKKLAVKKAMS 388
Query: 344 TIKWLDSN 321
+K L +
Sbjct: 389 LVKELQKS 396
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -2
Query: 497 EXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 330
+ D ++K AKN+LE Y + M+ + D+ E I+ + T WL
Sbjct: 564 QESDAREKAKADAKNSLEEYVYEMRDKVSDQ-YAEFITPAAADEFRSVLTSTEDWL 618
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 231 PEESPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTLKPT 91
P P + +A P P PPP L+A PP +K + PT
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPT 117
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 545 SPRKRSSVWLMRQRSTEXEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQ 369
+PRK S ++ S E DD+++E QA+ S+ S + DE SD D +
Sbjct: 623 TPRKSSKKSAAKEESEESSDDEEEE--QAEETNGSHTESPTKSKTDESDNSTSSDEDDE 679
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 440 YCFSMKSTMEDEKLKEKISDSDKQTILDKCN-DTIKW 333
+C+S KS++ EK++ +I + T+L K N + +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 440 YCFSMKSTMEDEKLKEKISDSDKQTILDKCN-DTIKW 333
+C+S KS++ EK++ +I + T+L K N + +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = -2
Query: 473 ETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN 321
E +N LES+ F +E+ + + ++D +K + D WL+ +
Sbjct: 692 ERAAVENELESFNFECSQYLEETEFTDYMADEEKTKLEDSVKRIRAWLEDD 742
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +1
Query: 85 VTGRFKCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 237
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +1
Query: 85 VTGRFKCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 237
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = +1
Query: 85 VTGRFKCGVECWFNRPPRWWGQRLQPRGRHLRLRVLRPGSPAYLRGLLRHP 237
V ++ + W +R RWW + L LR + G+L +P
Sbjct: 167 VIDQYDMSADMWRDRIKRWWSRNAGQSREEAELEYLRVAQDLEMYGILYYP 217
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 440 YCFSMKSTMEDEKLKEKISDSDKQTILDKCN-DTIKW 333
+C+S KS++ EK++ +I + T+L K N + +KW
Sbjct: 1971 HCYS-KSSLNHEKMESRILQHIEHTVLSKSNFNQMKW 2006
>Z49936-4|CAE47466.1| 343|Caenorhabditis elegans Hypothetical
protein F13B10.1d protein.
Length = 343
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 198 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 103
R E P P P G + A +RR I+P+ TT
Sbjct: 308 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 339
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 198 RAEHPEPEVPPPGLEALAPPSRRSIKPTFHTT 103
R E P P P G + A +RR I+P+ TT
Sbjct: 551 RMEPPTPTFTPTGSQERATSTRRKIQPSASTT 582
>Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5b protein.
Length = 212
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -1
Query: 321 PAGRXRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAP 142
P+G R S S K W+ R + E SP+V RA R PPP + +AP
Sbjct: 32 PSGWTRAS-ELSEKGWRELLDRRRSQSPPPREPSPDVRRAIR------RTPPPRVNRVAP 84
Query: 141 ---PSRRSIK 121
P RR ++
Sbjct: 85 IRLPERRPLR 94
>Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5a protein.
Length = 212
Score = 27.9 bits (59), Expect = 9.7
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -1
Query: 321 PAGRXRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALAP 142
P+G R S S K W+ R + E SP+V RA R PPP + +AP
Sbjct: 32 PSGWTRAS-ELSEKGWRELLDRRRSQSPPPREPSPDVRRAIR------RTPPPRVNRVAP 84
Query: 141 ---PSRRSIK 121
P RR ++
Sbjct: 85 IRLPERRPLR 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,328,155
Number of Sequences: 27780
Number of extensions: 292728
Number of successful extensions: 1406
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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