Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A11
(843 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 338 2e-93
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 338 2e-93
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 338 2e-93
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 336 1e-92
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 336 1e-92
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 324 6e-89
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 237 7e-63
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 116 1e-26
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 115 3e-26
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 115 3e-26
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 115 3e-26
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 115 5e-26
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 114 6e-26
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 113 1e-25
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 113 1e-25
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 112 2e-25
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 5e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 49 3e-06
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.31
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.31
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.1
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.8
At1g68080.1 68414.m07777 expressed protein 28 6.8
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.8
At3g26855.1 68416.m03360 hypothetical protein 28 8.9
At2g40070.1 68415.m04923 expressed protein 28 8.9
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 338 bits (832), Expect = 2e-93
Identities = 154/195 (78%), Positives = 171/195 (87%)
Frame = -3
Query: 718 FDGALNLTSPXSRLTGALXPVSXXPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 539
FDGALN+ + P L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMA 303
Query: 538 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 359
KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 358 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 179
PGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 178 DLAALEKDYEEVGMD 134
DLAALEKDYEEVG +
Sbjct: 424 DLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 338 bits (832), Expect = 2e-93
Identities = 154/195 (78%), Positives = 171/195 (87%)
Frame = -3
Query: 718 FDGALNLTSPXSRLTGALXPVSXXPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 539
FDGALN+ + P L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMA 303
Query: 538 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 359
KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 358 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 179
PGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 178 DLAALEKDYEEVGMD 134
DLAALEKDYEEVG +
Sbjct: 424 DLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 338 bits (832), Expect = 2e-93
Identities = 154/195 (78%), Positives = 171/195 (87%)
Frame = -3
Query: 718 FDGALNLTSPXSRLTGALXPVSXXPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 539
FDGALN+ + P L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMA 303
Query: 538 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 359
KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 358 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 179
PGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 178 DLAALEKDYEEVGMD 134
DLAALEKDYEEVG +
Sbjct: 424 DLAALEKDYEEVGAE 438
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 336 bits (826), Expect = 1e-92
Identities = 153/195 (78%), Positives = 168/195 (86%)
Frame = -3
Query: 718 FDGALNLTSPXSRLTGALXPVSXXPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 539
FDGA+N+ + P L +YAPVISA KAYHEQLSV EITNA FEPA+ M
Sbjct: 244 FDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMA 303
Query: 538 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 359
KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVV 363
Query: 358 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 179
PGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 178 DLAALEKDYEEVGMD 134
DLAALEKDYEEVG +
Sbjct: 424 DLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 336 bits (826), Expect = 1e-92
Identities = 153/195 (78%), Positives = 168/195 (86%)
Frame = -3
Query: 718 FDGALNLTSPXSRLTGALXPVSXXPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 539
FDGA+N+ + P L +YAPVISA KAYHEQLSV EITNA FEPA+ M
Sbjct: 244 FDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMA 303
Query: 538 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 359
KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVV 363
Query: 358 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 179
PGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 423
Query: 178 DLAALEKDYEEVGMD 134
DLAALEKDYEEVG +
Sbjct: 424 DLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 324 bits (795), Expect = 6e-89
Identities = 146/193 (75%), Positives = 163/193 (84%)
Frame = -3
Query: 718 FDGALNLTSPXSRLTGALXPVSXXPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 539
FDGA+N+ + P L +YAPVIS+ KAYHEQ SV EIT + FEP+N M
Sbjct: 244 FDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMA 303
Query: 538 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 359
KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVV 363
Query: 358 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 179
PGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEARE
Sbjct: 364 PGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEARE 423
Query: 178 DLAALEKDYEEVG 140
DLAALEKDYEEVG
Sbjct: 424 DLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 237 bits (580), Expect = 7e-63
Identities = 108/143 (75%), Positives = 121/143 (84%)
Frame = -3
Query: 718 FDGALNLTSPXSRLTGALXPVSXXPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMV 539
FDGALN+ + P L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M
Sbjct: 244 FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMA 303
Query: 538 KCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 359
KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVV
Sbjct: 304 KCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVV 363
Query: 358 PGGDLAKVQRAVCMLSNTTAIAE 290
PGGDLAKVQRAVCM+SN+T++AE
Sbjct: 364 PGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 116 bits (280), Expect = 1e-26
Identities = 54/166 (32%), Positives = 93/166 (56%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 268 MVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 327
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ I ++ K + FV+W P K + PPT ++ A + N+T+I E +
Sbjct: 328 DEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFVGNSTSIQEMF 379
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 380 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 115 bits (277), Expect = 3e-26
Identities = 53/166 (31%), Positives = 93/166 (56%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 267 MVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ + ++ K + FV+W P K + PPT ++ A + N+T+I E +
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMF 378
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 115 bits (277), Expect = 3e-26
Identities = 53/166 (31%), Positives = 93/166 (56%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 267 MVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ + ++ K + FV+W P K + PPT ++ A + N+T+I E +
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMF 378
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 115 bits (277), Expect = 3e-26
Identities = 53/166 (31%), Positives = 93/166 (56%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 267 MVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ + ++ K + FV+W P K + PPT ++ A + N+T+I E +
Sbjct: 327 DEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMF 378
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 115 bits (276), Expect = 5e-26
Identities = 53/166 (31%), Positives = 93/166 (56%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ + ++ K + FV+W P K + PPT ++ A + N+T+I E +
Sbjct: 327 DEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMF 378
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 114 bits (275), Expect = 6e-26
Identities = 54/166 (32%), Positives = 92/166 (55%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 268 MVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEV 327
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ I I+ K + FV+W P K + PP ++ A + N+T+I E +
Sbjct: 328 DEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATFVGNSTSIQEMF 379
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 380 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 113 bits (273), Expect = 1e-25
Identities = 54/166 (32%), Positives = 93/166 (56%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 267 MVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEV 326
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ + I+ K + FV+W P K + + P G ++ A + N+T+I E +
Sbjct: 327 DEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG----LKMASTFIGNSTSIQEMF 378
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 113 bits (272), Expect = 1e-25
Identities = 53/166 (31%), Positives = 93/166 (56%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 267 MVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEV 326
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ + ++ K + FV+W P K + + P G ++ A + N+T+I E +
Sbjct: 327 DEQMMNVQNKNSSYFVEWIPNNVKSSV----CDIAPTG----LKMASTFIGNSTSIQEMF 378
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 112 bits (270), Expect = 2e-25
Identities = 52/166 (31%), Positives = 92/166 (55%)
Frame = -3
Query: 643 LVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDV 464
+V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG + K+V
Sbjct: 267 MVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEV 326
Query: 463 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAW 284
+ + ++ K + FV+W P K + + P G + A + N+T+I E +
Sbjct: 327 DEQMINVQNKNSSYFVEWIPNNVKSSV----CDIAPRG----LSMASTFIGNSTSIQEMF 378
Query: 283 ARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 146
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.0 bits (119), Expect = 5e-07
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Frame = -3
Query: 634 YAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVP 473
Y P+ +A + +V ++ + N MV R+ KY++ + +G+V P
Sbjct: 273 YTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDP 332
Query: 472 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 293
V+ ++ I+ ++ + F+DW P +V ++ + P V ++ + ML++ T+I
Sbjct: 333 TQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIR 387
Query: 292 EAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 149
++R ++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 388 HLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 49.2 bits (112), Expect = 3e-06
Identities = 37/172 (21%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Frame = -3
Query: 634 YAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVP 473
Y P+ +A + +V ++ + N MV R+ KY++ + +G+V P
Sbjct: 273 YTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDP 332
Query: 472 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIA 293
V+ ++ I+ ++ + F++W P +V ++ + P V ++ + ML++ T+I
Sbjct: 333 TQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL-----MLASHTSIR 387
Query: 292 EAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 149
+++ ++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 388 HLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 279 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 172
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 455 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 562
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 374 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 478
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 151 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 267
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 490 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 347
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 416 DELDSTLGFDGSDGRVHILGYDVTTVQ 496
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 64 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 225
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 226 TSA 234
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 258 SCTPSVLSCTGTSVRVWRRESSPK 187
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 27.9 bits (59), Expect = 8.9
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = -1
Query: 669 PXPPYPXXHWSRTRQSSLPRRXTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT 490
P P S +R + + T ++ S S T S+P T +A P ++T L+ T
Sbjct: 235 PTPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-T 292
Query: 489 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVSTTSHPP 364
+S P +RP+LP ++ +S+ +P+ S S +TT+ P
Sbjct: 293 ARSSTPT--SRPTLPPSKTISRSSTPTRRPIASASAATTTANP 333
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,647,278
Number of Sequences: 28952
Number of extensions: 348291
Number of successful extensions: 1278
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -