Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A10
         (813 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0339 + 16922509-16923876,16923941-16924384,16924469-169246...    28   7.7  

>10_08_0339 +
           16922509-16923876,16923941-16924384,16924469-16924655,
           16924750-16925702
          Length = 983

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = -2

Query: 443 LNVMLQACCVVVISDFRPVPTVIIEIDGIKNVEHAEKSVLYYIKPL-SINIEWEGRRSKI 267
           LNV+L A  +  I D R    V+ E+D + ++       L   +P+ ++ + W   +  +
Sbjct: 279 LNVLLYASLLHAIFDHRDCTVVLDEVDELLDLIRKTWPTLGVTRPVHNVCLAWAFFQQYV 338

Query: 266 TIAHIEPDI 240
               +EP++
Sbjct: 339 VTGQVEPEL 347


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,346,048
Number of Sequences: 37544
Number of extensions: 279155
Number of successful extensions: 417
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)