Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A10
         (813 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.4  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   5.9  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 194 HGWI*VLLYATLKSSKYQAQYELS*FSTGGPPIQY 298
           + W+ V   +  + ++ + QY L  F+TG P + Y
Sbjct: 162 NNWLSVFWGSAWQWNEERKQYYLHQFATGQPDLNY 196


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +1

Query: 325 KTLFSACXXXXXXXXXXXXVGTGRKSEITTTQHACNITFKN*VN 456
           + L  AC            V TG  SEIT  Q A  + +K+  N
Sbjct: 197 ENLVQACFQQAQTTYVTKEVATGTASEITQIQEA-TLVYKDGTN 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,457
Number of Sequences: 438
Number of extensions: 3388
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)