Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A06
(845 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 90 2e-18
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 68 8e-12
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 65 6e-11
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 62 4e-10
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 52 4e-07
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 52 8e-07
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 51 1e-06
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 43 3e-04
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 34 0.16
07_03_0843 - 21962223-21963815,21963957-21964607 29 3.5
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 29 6.2
03_05_0078 + 20555296-20555560,20555643-20555887,20555947-205561... 28 8.1
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 90.2 bits (214), Expect = 2e-18
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Frame = -3
Query: 774 IRILRTTVRQEPGSDXKGD----TSGHFKRLCVSLCMXNRDENQGIDXXXXXXXXXXXXX 607
++I++ T + G+ + D TSG ++L ++ R E +D
Sbjct: 105 LQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLLLAYVGIPRYEGPEVDPTIVTHDAKDLYK 164
Query: 606 XXXGQWXTDESXFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIA 427
+ TDE F I RS+ + + + Y + + +E +K E SG+ E +L I
Sbjct: 165 AGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTIL 224
Query: 426 KCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKYGK 268
+C ++ +FA+ L SMKG+GT+D TLIR+VV+R+EID+ IK + KY K
Sbjct: 225 RCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKK 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -3
Query: 585 TDESXFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 430
TD+S +++TR+ ++ I AEY K + ++I E SG+ +L++
Sbjct: 247 TDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSL 298
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 68.1 bits (159), Expect = 8e-12
Identities = 31/75 (41%), Positives = 49/75 (65%)
Frame = -3
Query: 480 SIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGD 301
++K E SG+ G+L I +C +S +FA+ L+ +MKG+GTND TLIR+V +R+E+D+
Sbjct: 250 AVKSETSGNFGFGLLTILRCAESPAKYFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 300 IKQAFLDKYGKXPGD 256
IK + Y + D
Sbjct: 310 IKAEYHRSYKRSLAD 324
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 65.3 bits (152), Expect = 6e-11
Identities = 30/105 (28%), Positives = 54/105 (51%)
Frame = -3
Query: 582 DESXFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVG 403
DE+ + RS QLR F Y+ + G D ++KK G E+ + + KC+ +
Sbjct: 187 DEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQSLRVVVKCIYNPSM 246
Query: 402 FFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKYGK 268
+F++ L+ S++ TN + + R ++ ++D+ IK F YGK
Sbjct: 247 YFSKLLHRSLQCSATNKRLVTRAILGSDDVDMDKIKSVFKSSYGK 291
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/96 (34%), Positives = 51/96 (53%)
Frame = -3
Query: 561 ILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLY 382
I+ TRS QLR F Y G DI + I G + + C+ S FAE +
Sbjct: 181 IVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCLTSPEKHFAEVIR 240
Query: 381 YSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKY 274
+S+ G+GT + L R++VSR+EID+ I++ + +Y
Sbjct: 241 HSILGLGTYEDMLTRVIVSRAEIDMRHIREEYKVRY 276
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 52.4 bits (120), Expect = 4e-07
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Frame = -3
Query: 561 ILITRSYQQLRQIFAEYEALTG----KDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFA 394
IL TRS QL F Y G KD++ K EF G++ AI +C +F
Sbjct: 119 ILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLR----AIIRCFTCPDRYFE 174
Query: 393 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAF 286
+ + ++ G+GT++ +L RI+ +R+E+DL IK+A+
Sbjct: 175 KVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAY 210
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -3
Query: 393 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKYGK 268
E+L + KG GTN+K +I I+ R I++A+ + YG+
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGE 59
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = -3
Query: 591 WXTDESXFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIE--KGMLAIAKCV 418
W T+E SIL R Q R I Y G+++ ++ E G E ++ + +
Sbjct: 27 WGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELLVPLVTVYRYD 86
Query: 417 KSKVGFF-----AERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKYG 271
+V A+ L+ + +D +IRI+ +RS+ L ++ D++G
Sbjct: 87 GPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQFG 140
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 51.6 bits (118), Expect = 8e-07
Identities = 37/149 (24%), Positives = 63/149 (42%)
Frame = -3
Query: 732 DXKGDTSGHFKRLCVSLCMXNRDENQGIDXXXXXXXXXXXXXXXXGQWXTDESXFNSILI 553
D +G F++L V L R E ++ + D+ IL
Sbjct: 138 DVAAHATGDFRKLLVPLISAYRYEGPEVNTKLAHSEAKILHEKIQHKAYGDDEIIR-ILT 196
Query: 552 TRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLYYSM 373
TRS QL F Y G I +K + + AI +C +F + + ++
Sbjct: 197 TRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIRCFCCPDRYFEKVIRLAI 256
Query: 372 KGIGTNDKTLIRIVVSRSEIDLGDIKQAF 286
G+GT++ +L RI+ +R+E+DL I +A+
Sbjct: 257 AGMGTDENSLTRIITTRAEVDLKLITEAY 285
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/106 (24%), Positives = 46/106 (43%)
Frame = -3
Query: 591 WXTDESXFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 412
W T+E+ SIL R Q R I Y G+++ SI E SG E+ ++
Sbjct: 27 WGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVILWTLDPAE 86
Query: 411 KVGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKY 274
+ A + G+ + L+ I +R L ++QA+ +++
Sbjct: 87 RDAVLANEVARKWYP-GSGSRVLVEIACARGPAQLFAVRQAYHERF 131
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -3
Query: 393 ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKYGK 268
++L + +G GTN+ +I I+ R I++A+ D YG+
Sbjct: 18 DQLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGE 59
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/96 (30%), Positives = 50/96 (52%)
Frame = -3
Query: 561 ILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKSKVGFFAERLY 382
I+ TRS QL Y GK I++ + + + A C+ S FAE +
Sbjct: 246 IVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHFAEVIR 305
Query: 381 YSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKY 274
S+ G+GT+++ L R +VSR+E+D+ +K+ + +Y
Sbjct: 306 TSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRY 341
Score = 33.1 bits (72), Expect = 0.29
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = -3
Query: 591 WXTDESXFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCVKS 412
W TDE+ IL R+ Q +I YE L + + D + E SG ++ +
Sbjct: 73 WGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALMLWTMDPAA 132
Query: 411 KVGFFA-ERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAFLDKY 274
+ A E L KG + L+ + + S L +++A+ Y
Sbjct: 133 RDAKLANEALKKKKKGELRHIWVLVEVACASSPDHLVAVRKAYRAAY 179
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 43.2 bits (97), Expect = 3e-04
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = -3
Query: 585 TDESXFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIA-KCVKSK 409
TD I+ TRS QL F+ + G I +++ + L A +C+
Sbjct: 157 TDHGELIRIVGTRSRAQLNATFSWFRDERGTSITKALQHGADPTGYSHALRTALRCISDA 216
Query: 408 VGFFAERLYYSMKGIGTNDKTLIRIVVSRSEIDLGDIKQAF 286
+F + L +M GTN+ +L R++V +E DL IK AF
Sbjct: 217 NKYFVKVLRNAMHKSGTNEDSLTRVIVLHAEKDLKGIKDAF 257
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 33.9 bits (74), Expect = 0.16
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = -2
Query: 511 RSFDRKRH*GLDQERILW*H*EGHARYCQMRKEQGRFLR*APVLLDEGHRHQRQDAHPHR 332
R DR R G D ER GH R+ + +++ R A D GH H+R DA
Sbjct: 367 RDRDRDRDRGRDYERD---RDRGHDRHRERGRDRERDYERASHERDRGHMHER-DAEFAN 422
Query: 331 GEPLRDRPRGH 299
GEP D+ G+
Sbjct: 423 GEPKHDQEYGY 433
>07_03_0843 - 21962223-21963815,21963957-21964607
Length = 747
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 328 EPLRDRPRGHQAGIPR*VRQVPWRPGSLTIRKETSN 221
EP+ + +GH AGI + V P R +L+++ T N
Sbjct: 202 EPIENHRKGHHAGIVKVVLDHPIRGHNLSLKDSTGN 237
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 611 PPLVKVNGXPTNQXSTPSLSLAPISS*DRSSPSTKL*PEKTL 486
P ++K + P+ ++PS S A D S+PST PE+T+
Sbjct: 2006 PAVIKSSDTPSLNLNSPSSSSAGSRGQDASTPSTFEEPERTM 2047
>03_05_0078 +
20555296-20555560,20555643-20555887,20555947-20556180,
20556451-20556537,20556624-20556959,20557057-20557194,
20557231-20557311,20557392-20557480,20557750-20557813,
20557896-20557985,20558064-20558186
Length = 583
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 269 LPYLSRNACLMSPRSISERLTTMRMSVLSLVP 364
+PY NA +S S+ +R T +M+V S+VP
Sbjct: 505 IPYERTNAKQLSEESLGKRSRTSQMNVKSMVP 536
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,140,370
Number of Sequences: 37544
Number of extensions: 361945
Number of successful extensions: 915
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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