SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A05
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.59 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   7.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   7.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   9.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 498 LKLSGLALDADCPTGMHATFERLRRRGSLPLVRAVLDLR 382
           LKL G     DC  G    +ER RR+   P++  V  LR
Sbjct: 701 LKLMGGKWSCDCDLGWVEVWERKRRQYLCPVLLRVSILR 739


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 358 VGEPPAGRAQVEHGAHERQRPAPPEP 435
           +G+ P  +  + + + E   P PP P
Sbjct: 711 IGQQPGAKESISYLSMENNAPPPPPP 736


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 600 KEEE*RLLGESLCKVFLHLLDTDKE 526
           K EE +   E LCKV   +LD   E
Sbjct: 549 KREEDKAKFEGLCKVMKSILDNKVE 573


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 113 SDSIS*ETRGSSPAFQDPFQSPTSRSQAPPXISSSMG 223
           SDS S     S     +   SP S +Q PP  ++ MG
Sbjct: 406 SDSCSDSEENSQSDITNNVNSPASMNQTPPP-TAQMG 441


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -1

Query: 522 NIKAVCQLLKLSGLALDADCPTGMHATFERLRRRGSLPLVRAV 394
           N+ A+  +L+     LD   P     +FE L+R+  +  +RA+
Sbjct: 127 NVAAISGVLRS---LLDRPLPAPERPSFEGLKRQNPVKFLRAI 166


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/28 (25%), Positives = 19/28 (67%)
 Frame = +1

Query: 586 LFFLLDYPQAEYKSXARNIANPRIFSSE 669
           ++ +LD  +++Y+   R +AN ++ +S+
Sbjct: 146 IYLILDTIKSKYRQMHRLLANYKVITSD 173


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 12/54 (22%), Positives = 25/54 (46%)
 Frame = -2

Query: 638 FLAXDLYSA*G*SRRKNKDFSVKVSAKFFCIYWTLIRSQTSKLFVNCSSCRVWP 477
           F+A +L +     ++  K+  + +      I + +++S      V C S R+WP
Sbjct: 290 FMAYELATNPHVQKKLQKEIDLTLQENHGKISYNVLQSMKYLDQVVCESLRLWP 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,832
Number of Sequences: 336
Number of extensions: 2592
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -