Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_A03
         (799 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...   163   1e-40
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...   163   1e-40
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...   163   1e-40
Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    31   0.96 
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        31   0.96 
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    30   1.7  
U08139-1|AAA83388.1|  192|Caenorhabditis elegans ubc-1 protein.        30   2.2  
AF045638-8|AAC02561.2|  192|Caenorhabditis elegans Ubiquitin con...    30   2.2  
U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like ...    29   3.9  
AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to SU...    29   3.9  
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    29   5.1  
AF016415-5|AAW88414.1|  305|Caenorhabditis elegans Serpentine re...    29   5.1  
Z70754-3|CAA94773.1|  293|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U53180-3|AAA96284.1|  727|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score =  163 bits (396), Expect = 1e-40
 Identities = 72/108 (66%), Positives = 84/108 (77%)
 Frame = -1

Query: 655 PEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSS 476
           PE+L   FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS 
Sbjct: 259 PEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSP 318

Query: 475 DWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 332
           DWQVDYESY W KLD  S+ TKK V +Y  W G D  G+KFNQGKIFK
Sbjct: 319 DWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 365


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score =  163 bits (396), Expect = 1e-40
 Identities = 72/108 (66%), Positives = 84/108 (77%)
 Frame = -1

Query: 655 PEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSS 476
           PE+L   FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS 
Sbjct: 267 PEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSP 326

Query: 475 DWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 332
           DWQVDYESY W KLD  S+ TKK V +Y  W G D  G+KFNQGKIFK
Sbjct: 327 DWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 373


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score =  163 bits (396), Expect = 1e-40
 Identities = 72/108 (66%), Positives = 84/108 (77%)
 Frame = -1

Query: 655 PEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSS 476
           PE+L   FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS 
Sbjct: 292 PEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSP 351

Query: 475 DWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 332
           DWQVDYESY W KLD  S+ TKK V +Y  W G D  G+KFNQGKIFK
Sbjct: 352 DWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 398


>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 495 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 605
           S F  H  TP+++ LL   N  T    C  I+  +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 495 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 605
           S F  H  TP+++ LL   N  T    C  I+  +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -1

Query: 487  PLSSDWQVDYESYDWKKL 434
            PL  D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689


>U08139-1|AAA83388.1|  192|Caenorhabditis elegans ubc-1 protein.
          Length = 192

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 492 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 605
           T  +P    T + +  +  PN   D   CL IL N W+
Sbjct: 60  TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97


>AF045638-8|AAC02561.2|  192|Caenorhabditis elegans Ubiquitin
           conjugating enzyme protein1 protein.
          Length = 192

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 492 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 605
           T  +P    T + +  +  PN   D   CL IL N W+
Sbjct: 60  TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97


>U40414-2|AAA81405.2|  634|Caenorhabditis elegans Hypothetical
           protein F53B3.2 protein.
          Length = 634

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 396 TTSRGTEPTKTVESSTRARYSSECRPTSS 310
           TT+  T PT T E ST A+ S+  +PT++
Sbjct: 218 TTTTSTFPTSTTEKSTTAQPSTTTKPTTT 246


>U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like
           protease protein 1 protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 329 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 237
           N D +   +Y F+T    N   K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564


>AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to
           SUMO-1-specific protease protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 329 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 237
           N D +   +Y F+T    N   K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
           protein Y8A9A.2 protein.
          Length = 1360

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 519 CGCGAERSSCSRCRLIGRWTTSPTTG 442
           C C  + +    CRL+  W+   TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721


>AF016415-5|AAW88414.1|  305|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 30 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 84  GTTLNKCKYYHFFMQRRVVF 143
           G  +NKC Y +F +QR +VF
Sbjct: 171 GCAINKCFYNYFMLQRSIVF 190


>Z70754-3|CAA94773.1|  293|Caenorhabditis elegans Hypothetical
           protein F58E6.3 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -2

Query: 396 TTSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKLYKKETFKCK*VDVGNFRN 217
           T  +G    K  E + + + S+      + CI +   N+KK+Y   + KCK   VGN  +
Sbjct: 197 TYQQGANTAKMCEWTNQCKASTHNCHWLAACIDLPDENHKKMY---SCKCKPGFVGNGFH 253

Query: 216 C 214
           C
Sbjct: 254 C 254


>Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical
           protein M195.2 protein.
          Length = 419

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 588 KCANRLSHPSACLVKTTIPPSLECGCGAERSSCSRCRLIGRWTTSPTTG 442
           KC+   +  +     + +P +  CGC A  S  + CR   R T S + G
Sbjct: 4   KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGG 52


>U53180-3|AAA96284.1|  727|Caenorhabditis elegans Hypothetical
           protein D1014.5 protein.
          Length = 727

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -2

Query: 393 TSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKLYKKETFKCK 244
           T + TE T TVE++ R          ++Q    SYN   K  KK   KCK
Sbjct: 334 TKKVTEETTTVETTERQNVDDTTENQTTQTTSSSYN--AKEEKKSYRKCK 381


>U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical
           protein F53B3.1 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 64  EMRYRSRERH*INASIIIFSCNAASFSALHYTAIENH 174
           E+   + ER  ++  II F C    F A  YTA+E H
Sbjct: 454 EVAVMTHER--MHTGIIKFECKVCDFRANRYTAMEEH 488


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,291,949
Number of Sequences: 27780
Number of extensions: 412283
Number of successful extensions: 1334
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)