Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A02
(811 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 139 9e-32
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 115 1e-24
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 92 2e-17
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 87 4e-16
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 73 7e-12
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 66 1e-09
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 60 5e-08
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 57 6e-07
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 56 1e-06
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 56 1e-06
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 47 6e-04
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 44 0.003
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 43 0.008
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 43 0.011
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 37 0.52
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 36 1.6
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 139 bits (336), Expect = 9e-32
Identities = 64/83 (77%), Positives = 76/83 (91%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
GSWKTPSK+KKNFNLPQPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRKLNPLTN KA
Sbjct: 130 GSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRKLNPLTNTKA 189
Query: 375 MLKLNPYAAVXEEESYLRAAQKE 307
MLKLNPYAAV ++++ L +++
Sbjct: 190 MLKLNPYAAVLKKKAVLDQVKRK 212
Score = 50.8 bits (116), Expect = 4e-05
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = -3
Query: 344 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKPRERRRKNI 201
LK+KA+L+ +RKN +AL AEK G+KL +PA+KA K +E+R K+I
Sbjct: 200 LKKKAVLDQVKRKNKRALEVAEKRGIKLPDDDPAVKALKLKEKRAKSI 247
Score = 38.3 bits (85), Expect = 0.23
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLDPFXXVMEDTIKTKEELQ-PAP 506
PG H GR +IWTQSAF RLD + K K+ P P
Sbjct: 107 PGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQP 147
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 115 bits (277), Expect = 1e-24
Identities = 54/89 (60%), Positives = 67/89 (75%)
Frame = -2
Query: 576 AGLTPXXGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 397
A L G+WK PS KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LN
Sbjct: 261 ARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLN 320
Query: 396 PLTNNKAMLKLNPYAAVXEEESYLRAAQK 310
PLTN + ++KLNPYA V + + L A ++
Sbjct: 321 PLTNVRQLIKLNPYAEVLKRRAALAAEKR 349
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR VIWT+SAF RL+
Sbjct: 245 PGGHVGRFVIWTESAFARLN 264
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 91.9 bits (218), Expect = 2e-17
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 4.9
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 87.4 bits (207), Expect = 4e-16
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K NPL N
Sbjct: 104 GTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLKKNPLKNLGI 163
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 164 MLKLNPYAKTMRRNTILRQAKNHKL 188
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 73.3 bits (172), Expect = 7e-12
Identities = 35/67 (52%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATRKLNPLTNNK 379
G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R +K NPL N +
Sbjct: 182 GTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLKKKNPLKNLR 241
Query: 378 AMLKLNP 358
MLKLNP
Sbjct: 242 LMLKLNP 248
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 66.1 bits (154), Expect = 1e-09
Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--ATRKLNPLTNN 382
G+ + S KK + P MA TDLTRL+ SDEI+ L AP IR A K NPL N
Sbjct: 268 GTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAPLKRNPLKNK 327
Query: 381 KAMLKLNPYAAVXEEESYLRAAQKEE 304
AM KLNPYA V E ++A +EE
Sbjct: 328 SAMDKLNPYAKVARE---MQARAQEE 350
Score = 36.3 bits (80), Expect = 0.91
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLDPFXXVMEDTIKTKEELQPAPT 503
PG H GR +IWT+SAF +LD +K+ +P PT
Sbjct: 245 PGGHVGRFIIWTKSAFEKLDSIFGTSTSKSASKKGWKP-PT 284
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -2
Query: 501 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLR 322
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + L
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62
Query: 321 AAQKEELE 298
A+ +L+
Sbjct: 63 EARNHKLQ 70
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLR-----APNKRVIRATRKLNPL 391
GS PS KK+F LP M DL++++ S +I+KVLR A +KR + +K NPL
Sbjct: 247 GSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDIQKVLRPVRGGAVSKRGV--VQKKNPL 304
Query: 390 TNNKAMLKLNPYAAVXEEE 334
N + L+LNPYAA +E
Sbjct: 305 KNFQVQLRLNPYAATFSKE 323
Score = 37.5 bits (83), Expect = 0.40
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLDP-FXXVMEDTIKTKEELQPA 509
PG H GR ++WT SAFG LD + E + K+ L P+
Sbjct: 224 PGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFLLPS 263
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 56.8 bits (131), Expect = 6e-07
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI--RA-TRKLNPLTN 385
G+ PS KK+F LP ++ D+ RL+ S E++ V+RA + RA +K NPL N
Sbjct: 270 GTTTAPSALKKDFLLPSNVVSQADIGRLINSSELQSVIRAAKGSALTKRAGVQKKNPLLN 329
Query: 384 NKAMLKLNPYAAVXEEE 334
+ +L+LNPYAA +E
Sbjct: 330 KQVLLRLNPYAAGYSKE 346
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = -2
Query: 576 AGLTPXXGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKL 400
A L G+++ S K + L +P + N DL R++ S++++ KV A +V+ +K
Sbjct: 260 AHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLHDVQKK 319
Query: 399 NPLTNNKAMLKLNPYA 352
NPL N KAM +LNPYA
Sbjct: 320 NPLKNTKAMDRLNPYA 335
Score = 33.9 bits (74), Expect = 4.9
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG GR VIWTQSAF LD
Sbjct: 244 PGGQLGRFVIWTQSAFAHLD 263
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = -2
Query: 576 AGLTPXXGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKL 400
A L G+++ S K + L +P + N DL R++ S++++ KV A V+ +K
Sbjct: 106 ANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLHEVQKK 165
Query: 399 NPLTNNKAMLKLNPYAAVXEEESYLRAAQKEELEGS 292
NPL N+KA+ +LNPYA ++ + AA K G+
Sbjct: 166 NPLKNSKALDRLNPYA--KKQRAAATAAVKAHTTGT 199
Score = 33.9 bits (74), Expect = 4.9
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG GR VIWTQSAF LD
Sbjct: 90 PGGQLGRFVIWTQSAFANLD 109
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = -2
Query: 570 LTPXXGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-RATRKLNP 394
L G+ K ++ K F + +MA D+ R++ + E K+LRA K V+ + ++ NP
Sbjct: 262 LNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPKVPKRANP 319
Query: 393 LTNNKAMLKLNPYAAV 346
L N AM+KLNPYA +
Sbjct: 320 LKNWAAMVKLNPYAKI 335
Score = 33.5 bits (73), Expect = 6.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR +IWT+SAF +L+
Sbjct: 244 PGCHIGRFIIWTESAFKKLN 263
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = -2
Query: 528 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 349
K+N+ LP+ + TD+ R+L+SD ++K P + + RK++P ++ +A+ +L+P
Sbjct: 254 KQNYTLPRSCITQTDIERILQSDAVQKTF-VPKRDPLVIERKVDPFSSKEALARLDPSGT 312
Query: 348 V 346
V
Sbjct: 313 V 313
Score = 33.9 bits (74), Expect = 4.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR ++WT+SAF LD
Sbjct: 229 PGSHPGRLILWTKSAFASLD 248
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 43.2 bits (97), Expect = 0.008
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPN-----KRVIRATRKLNPL 391
GS+ S K + LP+P M N D+TR++ S E++ VLR + R+ K N L
Sbjct: 268 GSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSVLRPLRGFRCMGSMGRSKTKKNNL 327
Query: 390 TNNKAMLKLNP 358
TN LNP
Sbjct: 328 TNLTKRACLNP 338
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 42.7 bits (96), Expect = 0.011
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = -2
Query: 528 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNP 358
KKN+ LP+P + N D+ R++ SD+++ L + T+ N LTN +LNP
Sbjct: 274 KKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQNKNSLTNFAVRCRLNP 330
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 37.1 bits (82), Expect = 0.52
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Frame = -2
Query: 528 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRA---PNKRVIRATRKL---NPLTNNKAMLK 367
K + P P + NTDL+R++ S ++ VL+A +K++I R L + L+ N A +K
Sbjct: 274 KNEYKHPTPSVTNTDLSRIIHSPTVQSVLKARGKQSKKIINVRRNLLIASKLSQNNARIK 333
Score = 35.1 bits (77), Expect = 2.1
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLDPFXXVMEDTIKTKEELQ-PAPT 503
PG H GR +IWT+ A+ +LD T K E + P P+
Sbjct: 242 PGGHLGRFIIWTEGAYKKLDKLYGTRFRTALLKNEYKHPTPS 283
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 35.5 bits (78), Expect = 1.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLDPFXXVMEDTIKTK 527
PG H GR VIWT+S+F +LD E ++ +
Sbjct: 106 PGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRR 138
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,498,713
Number of Sequences: 1657284
Number of extensions: 8722042
Number of successful extensions: 22131
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22105
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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