Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_A02
(811 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 92 2e-18
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 92 2e-18
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 92 2e-18
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 90 8e-18
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 89 2e-17
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 264 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 323
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 324 MLKLNPYAKTMRRNTILRQARNHKL 348
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 241 PGGHVGRFCIWTESAFRKLD 260
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 91.9 bits (218), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 242 PGGHVGRFCIWTESAFRKLD 261
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 90.2 bits (214), Expect = 8e-18
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP +M NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 265 GTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 324
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + LR A+ +L
Sbjct: 325 MLKLNPYAKTMRRNTILRQARNHKL 349
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IW +SAF +LD
Sbjct: 242 PGGHVGRFCIWIESAFRKLD 261
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 88.6 bits (210), Expect = 2e-17
Identities = 41/85 (48%), Positives = 55/85 (64%)
Frame = -2
Query: 555 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 376
G+W+ + K N+NLP KM NTDL+R+LKS EI++ LRAP K++ R K NPL N +
Sbjct: 279 GTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRI 338
Query: 375 MLKLNPYAAVXEEESYLRAAQKEEL 301
MLKLNPYA + L A+ +L
Sbjct: 339 MLKLNPYAKTMRRNTILCQARNHKL 363
Score = 33.9 bits (74), Expect = 0.70
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 625 PGXHXGRXVIWTQSAFGRLD 566
PG H GR IWT+SAF +LD
Sbjct: 256 PGGHVGRFCIWTESAFRKLD 275
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,227,614
Number of Sequences: 237096
Number of extensions: 1444893
Number of successful extensions: 2744
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2743
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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