Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P22
         (821 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0500 - 25677767-25680850                                         30   1.9  
04_03_0703 - 18870287-18871351,18871542-18871733                       29   3.4  
04_01_0229 - 2897484-2900402                                           29   3.4  
01_07_0264 - 42388455-42388565,42388656-42388688,42388792-423889...    29   3.4  
11_02_0064 + 7936569-7936970                                           28   7.8  
09_03_0110 + 12432562-12432801,12432811-12433419                       28   7.8  

>04_04_0500 - 25677767-25680850
          Length = 1027

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = -3

Query: 513 HAVSPLLHMLYQS*TCITAVGPVQARVDSGTAPVINANLKDFDFVQKCNPNPAVQKTESI 334
           HAV   L  LY     + +   + A+VD+ +   INA +  F  VQ  N + A+Q  + +
Sbjct: 562 HAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF--VQNNNEDEAIQLFQQV 619

Query: 333 ITKSNKPSN 307
           +    KPS+
Sbjct: 620 LKDGLKPSS 628


>04_03_0703 - 18870287-18871351,18871542-18871733
          Length = 418

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 541 PPPQMGTAQARG*SPLAHALSELNLHHCCGTCTGTRRLGYSP 416
           PPP    A+A    P   + + ++   CCG+  GTRR  +SP
Sbjct: 236 PPP----ARAAAGPPSTGSSTSMSRARCCGSACGTRRSTWSP 273


>04_01_0229 - 2897484-2900402
          Length = 972

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 547 LGDFNAHHQEWLGSRTTDLPGRTA 618
           LGD ++HH +W+G+   DL  +++
Sbjct: 488 LGDHSSHHVKWIGTSNKDLTNKSS 511


>01_07_0264 -
           42388455-42388565,42388656-42388688,42388792-42388905,
           42389011-42389100,42389173-42389268,42389363-42389404,
           42389498-42389608,42392258-42392440,42392518-42392961
          Length = 407

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +2

Query: 359 GLGLHFWTKSKSLRLAL---ITGAVPESTRACTGPTAVMQV 472
           G G + WT  K  +LAL   ++G   E+  ACT  TAV QV
Sbjct: 16  GNGTNMWTGQKD-KLALDPCVSGDTNENAHACTSLTAVHQV 55


>11_02_0064 + 7936569-7936970
          Length = 133

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 500 GLTACLSSTHLRRWWFLETLTLIT 571
           GL A L     RRWWF E   L+T
Sbjct: 75  GLEAALGYEFERRWWFAEMTRLLT 98


>09_03_0110 + 12432562-12432801,12432811-12433419
          Length = 282

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +1

Query: 595 TDLPGRTAYDFALAYGLSQLVTQPTRVQILRGTSLLCWTSADPDQPDTVW 744
           T + G  A  +A     S +       ++LR    L W++ DP  P   W
Sbjct: 163 TVITGLLATAYAAVTAASDVAAMRVVAKVLRAHKALGWSTGDPCSPSKAW 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,543,675
Number of Sequences: 37544
Number of extensions: 553094
Number of successful extensions: 1472
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)