Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P22
         (821 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029926-1|AAH29926.1|  668|Homo sapiens SYDE1 protein protein.        33   1.6  
AK123686-1|BAC85676.1|  735|Homo sapiens protein ( Homo sapiens ...    33   1.6  
AC004794-2|AAC18917.1|  512|Homo sapiens F02569_2 protein.             33   1.6  
BC101090-1|AAI01091.1|  233|Homo sapiens HTR3D protein protein.        30   8.8  
AY159812-1|AAO38166.2|  279|Homo sapiens 5-hydroxytryptamine ser...    30   8.8  
AJ437318-1|CAD24817.1|  454|Homo sapiens 5-hydroxytryptamine 3-r...    30   8.8  

>BC029926-1|AAH29926.1|  668|Homo sapiens SYDE1 protein protein.
          Length = 668

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -2

Query: 610 DPGGQWFWTPTTLGDER*SLQEPPPPQMGTAQARG*SP 497
           +P G+ ++ P    D R    EPP PQ G+A++ G +P
Sbjct: 38  EPAGEIWYNPIPEEDPRPPAPEPPGPQPGSAESEGLAP 75


>AK123686-1|BAC85676.1|  735|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41692 fis, clone HCHON2000028, highly  similar
           to Homo sapiens 7h3 protein mRNA. ).
          Length = 735

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -2

Query: 610 DPGGQWFWTPTTLGDER*SLQEPPPPQMGTAQARG*SP 497
           +P G+ ++ P    D R    EPP PQ G+A++ G +P
Sbjct: 105 EPAGEIWYNPIPEEDPRPPAPEPPGPQPGSAESEGLAP 142


>AC004794-2|AAC18917.1|  512|Homo sapiens F02569_2 protein.
          Length = 512

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -2

Query: 610 DPGGQWFWTPTTLGDER*SLQEPPPPQMGTAQARG*SP 497
           +P G+ ++ P    D R    EPP PQ G+A++ G +P
Sbjct: 105 EPAGEIWYNPIPEEDPRPPAPEPPGPQPGSAESEGLAP 142


>BC101090-1|AAI01091.1|  233|Homo sapiens HTR3D protein protein.
          Length = 233

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -3

Query: 639 VGQGEIVGSPTREVSGSGPQPLLVMSVKVSKNHHLRRWVLLKHAVSPLLHMLY 481
           V  G++ G    E++G           +  K H +  WV   HA+  LL  LY
Sbjct: 164 VSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVELWVQFSHAMDALLFRLY 216


>AY159812-1|AAO38166.2|  279|Homo sapiens 5-hydroxytryptamine
           serotonin receptor 3D protein.
          Length = 279

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -3

Query: 639 VGQGEIVGSPTREVSGSGPQPLLVMSVKVSKNHHLRRWVLLKHAVSPLLHMLY 481
           V  G++ G    E++G           +  K H +  WV   HA+  LL  LY
Sbjct: 210 VSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVELWVQFSHAMDALLFRLY 262


>AJ437318-1|CAD24817.1|  454|Homo sapiens 5-hydroxytryptamine
           3-receptor subunit D protein.
          Length = 454

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -3

Query: 639 VGQGEIVGSPTREVSGSGPQPLLVMSVKVSKNHHLRRWVLLKHAVSPLLHMLY 481
           V  G++ G    E++G           +  K H +  WV   HA+  LL  LY
Sbjct: 385 VSAGQMPGPGEAELTGGSEWTRAQREHEAQKQHSVELWVQFSHAMDALLFRLY 437


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,063,497
Number of Sequences: 237096
Number of extensions: 3083337
Number of successful extensions: 6142
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6142
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)