Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_P21
(863 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 163 2e-40
08_02_1441 - 27116242-27116354,27116646-27116742,27116841-271170... 159 2e-39
01_06_1193 - 35306608-35306777,35306869-35306890,35306988-353069... 31 1.6
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 29 3.6
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 29 3.6
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 29 6.3
12_02_0604 + 20920609-20922144 28 8.4
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 28 8.4
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 28 8.4
03_01_0040 - 353861-353981,354618-354730,355034-355129,355406-35... 28 8.4
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 163 bits (395), Expect = 2e-40
Identities = 80/140 (57%), Positives = 98/140 (70%)
Frame = +3
Query: 372 QTVPPTIPVAELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEI 551
QT PP+IP+ ELFP G+FPEG+I + D+ R TSEEKR L+RL K +Y +
Sbjct: 191 QTDPPSIPIDELFPSGDFPEGEIQQYK-----DDNLW--RTTSEEKRELERLQKPMYNAV 243
Query: 552 RHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLXAGLAFPTGCSRNHCA 731
R AAE HRQ RKH+R+ +KPGM MID+CE LE R+LI E+GL AG+AFPTGCS N A
Sbjct: 244 RRAAEVHRQVRKHMRSILKPGMLMIDLCETLENMVRKLIKENGLQAGIAFPTGCSLNWVA 303
Query: 732 XHYTPXXGDTTVLEXDDVXK 791
H+TP GD TVL+ DDV K
Sbjct: 304 AHWTPNSGDKTVLQYDDVMK 323
>08_02_1441 -
27116242-27116354,27116646-27116742,27116841-27117058,
27117279-27117422,27117512-27117608,27117932-27118026,
27118140-27118231,27118326-27118471,27118565-27118664,
27118857-27118964,27119040-27119085,27119210-27119345,
27119847-27120044
Length = 529
Score = 159 bits (387), Expect = 2e-39
Identities = 80/140 (57%), Positives = 97/140 (69%)
Frame = +3
Query: 372 QTVPPTIPVAELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEI 551
QT PP+IPV ELFP G FPEG+I + D+ R TSEEKR L+RL K +Y +
Sbjct: 135 QTDPPSIPVDELFPSGEFPEGEIQHYK-----DDNLW--RTTSEEKRELERLQKPMYNAV 187
Query: 552 RHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIGEDGLXAGLAFPTGCSRNHCA 731
R AAE HRQ RK++R+ +KPGM MID+CE LE R+LI E+GL AG+AFPTGCS N A
Sbjct: 188 RRAAEVHRQVRKYMRSILKPGMLMIDLCETLENMVRKLIKENGLEAGIAFPTGCSLNCVA 247
Query: 732 XHYTPXXGDTTVLEXDDVXK 791
H+TP GD TVL+ DDV K
Sbjct: 248 AHWTPNGGDKTVLQYDDVMK 267
>01_06_1193 -
35306608-35306777,35306869-35306890,35306988-35306996,
35307107-35307115,35307470-35307491,35307981-35308784,
35308861-35309088,35309250-35309335,35309449-35309530,
35309630-35309778,35309992-35310105,35310961-35311059,
35311243-35311321,35311873-35312021
Length = 673
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 430 RVKLWTMVLLRVLMRELQKIV-LQVRRKELLIDYIKIFIRKSDMLLK 567
+V+ + + LL +M+ + V L+V + +L + +KI +K+DML++
Sbjct: 69 KVQFYALTLLETMMKNCGEYVQLEVAEQHVLQEMVKIIQKKNDMLVR 115
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 471 ERTAKNRFTSEEKRALDRLHKDIYQE 548
+RT K R+ SE+KR LDR HK++ ++
Sbjct: 60 KRTGKRRYPSEKKR-LDRRHKELLRK 84
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 504 EKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEELEKTARRLIG--ED 677
E++ LD D+ + + AA+ K + + KP ++DICE+ + R +G D
Sbjct: 9 EEKELDLSSSDVVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIRDDMGCHID 68
Query: 678 GLXAGLA 698
G A +A
Sbjct: 69 GFIAVVA 75
>03_05_1014 -
29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 596 ADVFSCLPVGFSSMSDFLINIFM*SIKSSFLLTCKTIFCSSLINTLSRTMV 444
A V +CL +G M+ +N + S+ S L C T+ CS TL+ M+
Sbjct: 361 AVVTTCLALGTKRMAR--LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMM 409
>12_02_0604 + 20920609-20922144
Length = 511
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 501 EEKRALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMT 620
E++ +D L KDI Q AEAHR+ + I W+ T
Sbjct: 457 EKREKIDVLIKDIEQLNLEVAEAHRKRKGGIWAWLYAATT 496
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 430 RVKLWTMVLLRVLMREL-QKIVLQVRRKELLIDYIKIFIRKSDMLLK 567
+V+ + + LL LM+ + QV +++L + IKI +K+DM L+
Sbjct: 55 KVQFFALTLLETLMKNCGDHVHSQVVERDILQEMIKIVKKKTDMQLR 101
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 468 DERTAKNRFTSEEK-RALDRLHKDIYQEIRHAAEAHRQTRKHIRNWIKPGMTMIDICEEL 644
DER+ N E RAL+ LH +E++ A + K + + + + D+ + L
Sbjct: 790 DERS--NHMQKEAALRALENLHSQSQEEVKQMARDVEHSNKKLSDLENNNLKLHDLSQGL 847
Query: 645 EKTARRL 665
+KT L
Sbjct: 848 KKTVAEL 854
>03_01_0040 -
353861-353981,354618-354730,355034-355129,355406-355522,
356071-356169,356416-356547,356651-356827,356949-357123,
357225-357313,357981-358079
Length = 405
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 396 VAELFPDGNFPEGQIMDHGPAE 461
+A+ PDGNF +G+++ GP E
Sbjct: 88 IAKCGPDGNFSKGEMVPFGPIE 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,308,698
Number of Sequences: 37544
Number of extensions: 258865
Number of successful extensions: 601
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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