Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P21
         (863 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)         63   2e-10
SB_31371| Best HMM Match : Peptidase_M24 (HMM E-Value=0)               35   0.074

>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
          Length = 708

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 32/59 (54%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
 Frame = +3

Query: 621 MIDICEELEKTARRLIGE-DG-LXAGLAFPTGCSRNHCAXHYTPXXGDTTVLEXDDVXK 791
           + D+ E +++T      E DG    GLAFPTGCS NHCA HYTP  GD TVL  DDV K
Sbjct: 82  LCDVGEAIQETMESYEVELDGKTYKGLAFPTGCSLNHCAAHYTPNAGDKTVLSYDDVCK 140



 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 25/33 (75%), Positives = 25/33 (75%)
 Frame = +3

Query: 693 LAFPTGCSRNHCAXHYTPXXGDTTVLEXDDVXK 791
           LAFPTGCS NHCA HYTP  GD TVL  DDV K
Sbjct: 2   LAFPTGCSLNHCAAHYTPNAGDKTVLSYDDVCK 34


>SB_31371| Best HMM Match : Peptidase_M24 (HMM E-Value=0)
          Length = 465

 Score = 35.1 bits (77), Expect = 0.074
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
 Frame = +3

Query: 612 GMTMIDICEE-----LEKTARRLIGEDGLXAGLAFPTGCSRNHCAXHYTPXXGDTTV-LE 773
           G T   +CE+     LE+T +    E  L  G+AFPT  S N+C  H++P   +  + L 
Sbjct: 46  GTTARTLCEKGDALILEETDKVYKKEKELKKGIAFPTCISVNNCVCHFSPLLSEPDITLN 105

Query: 774 XDDVXK 791
             D+ K
Sbjct: 106 DGDLVK 111


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,519,434
Number of Sequences: 59808
Number of extensions: 293271
Number of successful extensions: 828
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)