Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_P20
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.58 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.58 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   4.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   4.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.4  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 500 GDSGRSRPAPRAHHGHAPSAA 562
           GD G     P  H GH P AA
Sbjct: 397 GDGGEVAHLPNTHMGHEPGAA 417


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 500 GDSGRSRPAPRAHHGHAPSAA 562
           GD G     P  H GH P AA
Sbjct: 345 GDGGEVAHLPNTHMGHEPGAA 365


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 528 GAGRERPESPSCAGSDP 478
           G+G+ +PESP  + S P
Sbjct: 415 GSGQNQPESPESSSSTP 431


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 222 GSHCNRESPAYDINTSLYQITWPSSQLERYIRSTNTI 112
           GS+    + A   NTSLY  T+  S+   Y R+   I
Sbjct: 263 GSYGRGFALADPTNTSLYAATYGGSEAGPYTRAMGVI 299


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 222 GSHCNRESPAYDINTSLYQITWPSSQLERYIRSTNTI 112
           GS+    + A   NTSLY  T+  S+   Y R+   I
Sbjct: 263 GSYGRGFALADPTNTSLYAATYGGSEAGPYTRAMGVI 299


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -3

Query: 439 FRCPVSFGPIIVDVQCDVAGRVDGTEDELFRLSGN 335
           F+CP  FG       CD   + D    EL +  GN
Sbjct: 23  FKCPDDFGFYPHHTSCDKYWKCDNNVAEL-KTCGN 56


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -3

Query: 439 FRCPVSFGPIIVDVQCDVAGRVDGTEDELFRLSGN 335
           F+CP  FG       CD   + D    EL +  GN
Sbjct: 23  FKCPDDFGFYPHHTSCDKYWKCDNNVAEL-KTCGN 56


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 110 LIVFVLLIYLSSCDD 154
           L VFV+L+Y +S D+
Sbjct: 330 LSVFVILVYYASLDE 344


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 396 CTSTIIGPKLTGQRNACLA 452
           C    +GP+  G  N CL+
Sbjct: 286 CPPGFVGPRCEGDINECLS 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,077
Number of Sequences: 336
Number of extensions: 3656
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)